RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
TMEM254-207ENST00000463029 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
TMEM254-207ENST00000463029 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
TMEM254-207ENST00000463029 TXNDC2Q86VQ3 553 aa12.79□□□□□ -0.36
TMEM254-207ENST00000463029 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
TMEM254-207ENST00000463029 UBR1Q8IWV7 1749 aa12.79□□□□□ -0.36
TMEM254-207ENST00000463029 LTKP29376 864 aa12.78□□□□□ -0.36
TMEM254-207ENST00000463029 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
TMEM254-207ENST00000463029 EID1Q9Y6B2 187 aa12.77□□□□□ -0.37
TMEM254-207ENST00000463029 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.37
TMEM254-207ENST00000463029 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.37
TMEM254-207ENST00000463029 LRRC7Q96NW7 1537 aa12.77□□□□□ -0.37
TMEM254-207ENST00000463029 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
TMEM254-207ENST00000463029 SLIT1O75093 1534 aa12.76□□□□□ -0.37
TMEM254-207ENST00000463029 TMEM2Q9UHN6 1383 aa12.75□□□□□ -0.37
TMEM254-207ENST00000463029 ALKQ9UM73 1620 aa12.74□□□□□ -0.37
TMEM254-207ENST00000463029 SYNMO15061 1565 aa12.74□□□□□ -0.37
TMEM254-207ENST00000463029 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
TMEM254-207ENST00000463029 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
TMEM254-207ENST00000463029 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
TMEM254-207ENST00000463029 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
TMEM254-207ENST00000463029 IDI1Q13907 227 aa12.73□□□□□ -0.37
TMEM254-207ENST00000463029 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
TMEM254-207ENST00000463029 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
TMEM254-207ENST00000463029 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
TMEM254-207ENST00000463029 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
TMEM254-207ENST00000463029 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-207ENST00000463029 NOS1P29475 1434 aa12.7□□□□□ -0.38
TMEM254-207ENST00000463029 ANKRD50Q9ULJ7 1429 aa12.7□□□□□ -0.38
TMEM254-207ENST00000463029 BCANQ96GW7 911 aa12.68□□□□□ -0.38
TMEM254-207ENST00000463029 SLC26A8Q96RN1 970 aa12.68□□□□□ -0.38
TMEM254-207ENST00000463029 SLC52A1Q9NWF4 448 aa12.68□□□□□ -0.38
TMEM254-207ENST00000463029 ADGRB3O60242 1522 aa12.67□□□□□ -0.38
TMEM254-207ENST00000463029 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
TMEM254-207ENST00000463029 KCNA6P17658 529 aa12.66□□□□□ -0.38
TMEM254-207ENST00000463029 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
TMEM254-207ENST00000463029 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
TMEM254-207ENST00000463029 PROSER2Q86WR7 435 aaPredicted RBP12.65□□□□□ -0.38
TMEM254-207ENST00000463029 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
TMEM254-207ENST00000463029 TET3O43151 1660 aa12.64□□□□□ -0.39
TMEM254-207ENST00000463029 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
TMEM254-207ENST00000463029 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
TMEM254-207ENST00000463029 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
TMEM254-207ENST00000463029 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
TMEM254-207ENST00000463029 XIRP1Q702N8 1843 aaKnown RBP12.62□□□□□ -0.39
TMEM254-207ENST00000463029 ITGAEP38570 1179 aa12.61□□□□□ -0.39
TMEM254-207ENST00000463029 ZFYVE9O95405 1425 aa12.61□□□□□ -0.39
TMEM254-207ENST00000463029 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
TMEM254-207ENST00000463029 RIMS2Q9UQ26 1411 aa12.61□□□□□ -0.39
TMEM254-207ENST00000463029 NKTRP30414 1462 aaKnown RBP12.6□□□□□ -0.39
TMEM254-207ENST00000463029 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
TMEM254-207ENST00000463029 PLEKHG1Q9ULL1 1385 aa12.6□□□□□ -0.39
TMEM254-207ENST00000463029 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
TMEM254-207ENST00000463029 UNC13BO14795 1591 aa12.6□□□□□ -0.39
TMEM254-207ENST00000463029 MSH6P52701 1360 aa12.59□□□□□ -0.39
TMEM254-207ENST00000463029 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
TMEM254-207ENST00000463029 NWD1Q149M9 1564 aa12.58□□□□□ -0.4
TMEM254-207ENST00000463029 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
TMEM254-207ENST00000463029 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
TMEM254-207ENST00000463029 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.4
TMEM254-207ENST00000463029 GCC2Q8IWJ2 1684 aa12.57□□□□□ -0.4
TMEM254-207ENST00000463029 NUP155O75694 1391 aa12.57□□□□□ -0.4
TMEM254-207ENST00000463029 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
TMEM254-207ENST00000463029 E9PCH4 1651 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 ROBO1Q9Y6N7 1651 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 C14orf37Q86TY3 774 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 MYO5BQ9ULV0 1848 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
TMEM254-207ENST00000463029 RGS17Q9UGC6 210 aaPredicted RBP12.54□□□□□ -0.4
TMEM254-207ENST00000463029 POTEHQ6S545 545 aa12.53□□□□□ -0.4
TMEM254-207ENST00000463029 ADAMTS13Q76LX8 1427 aa12.53□□□□□ -0.4
TMEM254-207ENST00000463029 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
TMEM254-207ENST00000463029 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
TMEM254-207ENST00000463029 NCOA3Q9Y6Q9 1424 aa12.5□□□□□ -0.41
TMEM254-207ENST00000463029 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
TMEM254-207ENST00000463029 ATF3P18847 181 aa12.49□□□□□ -0.41
TMEM254-207ENST00000463029 JCADQ9P266 1359 aa12.48□□□□□ -0.41
TMEM254-207ENST00000463029 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
TMEM254-207ENST00000463029 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
TMEM254-207ENST00000463029 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
TMEM254-207ENST00000463029 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
TMEM254-207ENST00000463029 AMOTL2Q9Y2J4 779 aa12.48□□□□□ -0.41
TMEM254-207ENST00000463029 TRPM2O94759 1503 aa12.47□□□□□ -0.41
TMEM254-207ENST00000463029 PHLPP1O60346 1717 aa12.47□□□□□ -0.41
TMEM254-207ENST00000463029 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
TMEM254-207ENST00000463029 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
TMEM254-207ENST00000463029 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
TMEM254-207ENST00000463029 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
TMEM254-207ENST00000463029 SPHKAPQ2M3C7 1700 aa12.44□□□□□ -0.42
TMEM254-207ENST00000463029 RRBP1Q9P2E9 1410 aaKnown RBP12.44□□□□□ -0.42
TMEM254-207ENST00000463029 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
TMEM254-207ENST00000463029 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.43□□□□□ -0.42
TMEM254-207ENST00000463029 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
TMEM254-207ENST00000463029 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
TMEM254-207ENST00000463029 NAIPQ13075 1403 aa12.42□□□□□ -0.42
TMEM254-207ENST00000463029 METP08581 1390 aa12.42□□□□□ -0.42
TMEM254-207ENST00000463029 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
TMEM254-207ENST00000463029 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms