RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 MROH2AA6NES4 1674 aa9.87□□□□□ -0.83
SREBF2-204ENST00000462539 ZC3H13Q5T200 1668 aaKnown RBP9.87□□□□□ -0.83
SREBF2-204ENST00000462539 KIF1BO60333 1816 aa9.87□□□□□ -0.83
SREBF2-204ENST00000462539 EXOC6Q8TAG9 804 aa9.87□□□□□ -0.83
SREBF2-204ENST00000462539 MROH1Q8NDA8 1641 aa9.86□□□□□ -0.83
SREBF2-204ENST00000462539 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
SREBF2-204ENST00000462539 ANP32AP39687 249 aaKnown RBP9.86□□□□□ -0.83
SREBF2-204ENST00000462539 SCAPERQ9BY12 1400 aa9.86□□□□□ -0.83
SREBF2-204ENST00000462539 ASXL1Q8IXJ9 1541 aa9.86□□□□□ -0.83
SREBF2-204ENST00000462539 MAP3K4Q9Y6R4 1608 aa9.85□□□□□ -0.83
SREBF2-204ENST00000462539 PTPRTO14522 1441 aa9.85□□□□□ -0.83
SREBF2-204ENST00000462539 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
SREBF2-204ENST00000462539 NPM3O75607 178 aaKnown RBP9.85□□□□□ -0.83
SREBF2-204ENST00000462539 IPO9Q96P70 1041 aaKnown RBP9.85□□□□□ -0.83
SREBF2-204ENST00000462539 ATP7AQ04656 1500 aa9.85□□□□□ -0.83
SREBF2-204ENST00000462539 SCAF11Q99590 1463 aaKnown RBP9.85□□□□□ -0.83
SREBF2-204ENST00000462539 RTEL1-TNFRSF6BF6WH68 1400 aa9.84□□□□□ -0.83
SREBF2-204ENST00000462539 TCERG1O14776 1098 aaKnown RBP9.84□□□□□ -0.83
SREBF2-204ENST00000462539 TMF1P82094 1093 aa9.84□□□□□ -0.83
SREBF2-204ENST00000462539 RGL3Q3MIN7 710 aa9.84□□□□□ -0.83
SREBF2-204ENST00000462539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.831e-14■■□□□ 14.1
SREBF2-204ENST00000462539 PANK3Q9H999 370 aa9.83□□□□□ -0.84
SREBF2-204ENST00000462539 MYOM2P54296 1465 aa9.83□□□□□ -0.84
SREBF2-204ENST00000462539 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
SREBF2-204ENST00000462539 MS4A1P11836 297 aa9.82□□□□□ -0.84
SREBF2-204ENST00000462539 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
SREBF2-204ENST00000462539 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
SREBF2-204ENST00000462539 DEKP35659 375 aaKnown RBP9.81□□□□□ -0.84
SREBF2-204ENST00000462539 CDCA7LQ96GN5 454 aa9.81□□□□□ -0.84
SREBF2-204ENST00000462539 EFCAB6Q5THR3 1501 aa9.81□□□□□ -0.84
SREBF2-204ENST00000462539 SHPRHQ149N8 1683 aa9.8□□□□□ -0.84
SREBF2-204ENST00000462539 PPLO60437 1756 aa9.8□□□□□ -0.84
SREBF2-204ENST00000462539 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
SREBF2-204ENST00000462539 NPC1L1Q9UHC9 1359 aa9.79□□□□□ -0.84
SREBF2-204ENST00000462539 PLEKHH1Q9ULM0 1364 aa9.79□□□□□ -0.84
SREBF2-204ENST00000462539 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
SREBF2-204ENST00000462539 SALL2Q9Y467 1007 aaPredicted RBP9.79□□□□□ -0.84
SREBF2-204ENST00000462539 QRICH2Q9H0J4 1663 aa9.79□□□□□ -0.84
SREBF2-204ENST00000462539 KIDINS220Q9ULH0 1771 aa9.78□□□□□ -0.84
SREBF2-204ENST00000462539 PDE4AP27815 886 aa9.78□□□□□ -0.84
SREBF2-204ENST00000462539 EFCAB2Q5VUJ9 269 aa9.78□□□□□ -0.84
SREBF2-204ENST00000462539 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
SREBF2-204ENST00000462539 SETBP1Q9Y6X0 1596 aa9.78□□□□□ -0.84
SREBF2-204ENST00000462539 ERVK-7P63135 1459 aa9.78□□□□□ -0.84
SREBF2-204ENST00000462539 ADGRB3O60242 1522 aa9.77□□□□□ -0.84
SREBF2-204ENST00000462539 EIF3AQ14152 1382 aaKnown RBP9.77□□□□□ -0.84
SREBF2-204ENST00000462539 UGGT1Q9NYU2 1555 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 PPP2R1AP30153 589 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 NBR1Q14596 966 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 BACH2Q9BYV9 841 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 NRXN1Q9ULB1 1477 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 ZNF521Q96K83 1311 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 LMTK2Q8IWU2 1503 aa9.77□□□□□ -0.85
SREBF2-204ENST00000462539 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
SREBF2-204ENST00000462539 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
SREBF2-204ENST00000462539 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
SREBF2-204ENST00000462539 KDM2BQ8NHM5 1336 aa9.76□□□□□ -0.85
SREBF2-204ENST00000462539 PLIN1O60240 522 aa9.75□□□□□ -0.85
SREBF2-204ENST00000462539 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
SREBF2-204ENST00000462539 FANCAO15360 1455 aa9.74□□□□□ -0.85
SREBF2-204ENST00000462539 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
SREBF2-204ENST00000462539 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
SREBF2-204ENST00000462539 HECW2Q9P2P5 1572 aa9.74□□□□□ -0.85
SREBF2-204ENST00000462539 KANK1Q14678 1352 aa9.74□□□□□ -0.85
SREBF2-204ENST00000462539 ZBTB22O15209 634 aa9.73□□□□□ -0.85
SREBF2-204ENST00000462539 WDR43Q15061 677 aaKnown RBP eCLIP9.73□□□□□ -0.85
SREBF2-204ENST00000462539 RTL5Q5HYW3 569 aaPredicted RBP9.73□□□□□ -0.85
SREBF2-204ENST00000462539 DUSP27Q5VZP5 1158 aa9.73□□□□□ -0.85
SREBF2-204ENST00000462539 NPM2Q86SE8 214 aaKnown RBP9.73□□□□□ -0.85
SREBF2-204ENST00000462539 KNSTRNQ9Y448 316 aa9.73□□□□□ -0.85
SREBF2-204ENST00000462539 ADGRL1O94910 1474 aa9.72□□□□□ -0.85
SREBF2-204ENST00000462539 C20orf194Q5TEA3 1177 aa9.72□□□□□ -0.85
SREBF2-204ENST00000462539 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
SREBF2-204ENST00000462539 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
SREBF2-204ENST00000462539 IQSEC2Q5JU85 1478 aa9.72□□□□□ -0.85
SREBF2-204ENST00000462539 CAMSAP1Q5T5Y3 1602 aa9.71□□□□□ -0.85
SREBF2-204ENST00000462539 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.86
SREBF2-204ENST00000462539 RIMBP3CA6NJZ7 1639 aa9.71□□□□□ -0.86
SREBF2-204ENST00000462539 RIMBP3BA6NNM3 1639 aa9.71□□□□□ -0.86
SREBF2-204ENST00000462539 RIMBP3Q9UFD9 1639 aa9.71□□□□□ -0.86
SREBF2-204ENST00000462539 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
SREBF2-204ENST00000462539 CENPQQ7L2Z9 268 aaPredicted RBP9.7□□□□□ -0.86
SREBF2-204ENST00000462539 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
SREBF2-204ENST00000462539 ADGRB1O14514 1584 aa9.7□□□□□ -0.86
SREBF2-204ENST00000462539 FRMPD1Q5SYB0 1578 aa9.7□□□□□ -0.86
SREBF2-204ENST00000462539 PIK3C2BO00750 1634 aa9.7□□□□□ -0.86
SREBF2-204ENST00000462539 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
SREBF2-204ENST00000462539 SLC24A1O60721 1099 aa9.69□□□□□ -0.86
SREBF2-204ENST00000462539 GOLGA2Q08379 1002 aa9.69□□□□□ -0.86
SREBF2-204ENST00000462539 SLFN5Q08AF3 891 aa9.69□□□□□ -0.86
SREBF2-204ENST00000462539 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
SREBF2-204ENST00000462539 TRMT2AQ8IZ69 625 aaKnown RBP9.69□□□□□ -0.86
SREBF2-204ENST00000462539 SIGLEC1Q9BZZ2 1709 aa9.69□□□□□ -0.86
SREBF2-204ENST00000462539 GLI2P10070 1586 aa9.68□□□□□ -0.86
SREBF2-204ENST00000462539 NINLQ9Y2I6 1382 aa9.68□□□□□ -0.86
SREBF2-204ENST00000462539 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.68□□□□□ -0.86
SREBF2-204ENST00000462539 ADGRB2O60241 1585 aa9.67□□□□□ -0.86
SREBF2-204ENST00000462539 POLR3AO14802 1390 aaPredicted RBP9.67□□□□□ -0.86
SREBF2-204ENST00000462539 AFAP1Q8N556 730 aa9.67□□□□□ -0.86
SREBF2-204ENST00000462539 PPM1GO15355 546 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms