RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 FBXO41Q8TF61 875 aa13.25□□□□□ -0.29
LINC01888-202ENST00000457602 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
LINC01888-202ENST00000457602 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
LINC01888-202ENST00000457602 DIP2CQ9Y2E4 1556 aa13.24□□□□□ -0.29
LINC01888-202ENST00000457602 ABCC1P33527 1531 aa13.23□□□□□ -0.29
LINC01888-202ENST00000457602 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
LINC01888-202ENST00000457602 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
LINC01888-202ENST00000457602 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.29
LINC01888-202ENST00000457602 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
LINC01888-202ENST00000457602 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.3
LINC01888-202ENST00000457602 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
LINC01888-202ENST00000457602 G3V3G9 751 aa13.19□□□□□ -0.3
LINC01888-202ENST00000457602 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
LINC01888-202ENST00000457602 HNRNPMP52272 730 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC01888-202ENST00000457602 CFDP1Q9UEE9 299 aaPredicted RBP13.18□□□□□ -0.3
LINC01888-202ENST00000457602 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
LINC01888-202ENST00000457602 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
LINC01888-202ENST00000457602 SPAG9O60271 1321 aaKnown RBP13.17□□□□□ -0.3
LINC01888-202ENST00000457602 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
LINC01888-202ENST00000457602 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
LINC01888-202ENST00000457602 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
LINC01888-202ENST00000457602 AGLP35573 1532 aa13.17□□□□□ -0.3
LINC01888-202ENST00000457602 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
LINC01888-202ENST00000457602 KIDINS220Q9ULH0 1771 aa13.16□□□□□ -0.3
LINC01888-202ENST00000457602 PPP1R37O75864 691 aa13.15□□□□□ -0.3
LINC01888-202ENST00000457602 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
LINC01888-202ENST00000457602 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
LINC01888-202ENST00000457602 PLEKHH2Q8IVE3 1493 aa13.14□□□□□ -0.31
LINC01888-202ENST00000457602 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
LINC01888-202ENST00000457602 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
LINC01888-202ENST00000457602 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
LINC01888-202ENST00000457602 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
LINC01888-202ENST00000457602 C3P01024 1663 aa13.12□□□□□ -0.31
LINC01888-202ENST00000457602 CERKQ8TCT0 537 aa13.12□□□□□ -0.31
LINC01888-202ENST00000457602 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
LINC01888-202ENST00000457602 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
LINC01888-202ENST00000457602 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
LINC01888-202ENST00000457602 ZNF644Q9H582 1327 aaPredicted RBP13.1□□□□□ -0.31
LINC01888-202ENST00000457602 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
LINC01888-202ENST00000457602 GGT6Q6P531 493 aa13.09□□□□□ -0.31
LINC01888-202ENST00000457602 A2MP01023 1474 aa13.09□□□□□ -0.31
LINC01888-202ENST00000457602 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
LINC01888-202ENST00000457602 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
LINC01888-202ENST00000457602 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
LINC01888-202ENST00000457602 ZMYM3Q14202 1370 aa13.07□□□□□ -0.32
LINC01888-202ENST00000457602 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
LINC01888-202ENST00000457602 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
LINC01888-202ENST00000457602 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
LINC01888-202ENST00000457602 NPATQ14207 1427 aa13.04□□□□□ -0.32
LINC01888-202ENST00000457602 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
LINC01888-202ENST00000457602 PLXNC1O60486 1568 aa13.03□□□□□ -0.32
LINC01888-202ENST00000457602 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
LINC01888-202ENST00000457602 PTPRTO14522 1441 aa13.03□□□□□ -0.32
LINC01888-202ENST00000457602 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
LINC01888-202ENST00000457602 LOC105371045A0A1W2PR82 267 aa13.02□□□□□ -0.33
LINC01888-202ENST00000457602 POTEMA6NI47 508 aa13.02□□□□□ -0.33
LINC01888-202ENST00000457602 KIF3CO14782 793 aa13.02□□□□□ -0.33
LINC01888-202ENST00000457602 SNPHO15079 494 aa13.02□□□□□ -0.33
LINC01888-202ENST00000457602 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
LINC01888-202ENST00000457602 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
LINC01888-202ENST00000457602 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
LINC01888-202ENST00000457602 CAMSAP1Q5T5Y3 1602 aa13□□□□□ -0.33
LINC01888-202ENST00000457602 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
LINC01888-202ENST00000457602 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
LINC01888-202ENST00000457602 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
LINC01888-202ENST00000457602 KIF3BO15066 747 aa13□□□□□ -0.33
LINC01888-202ENST00000457602 ST18O60284 1047 aa13□□□□□ -0.33
LINC01888-202ENST00000457602 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
LINC01888-202ENST00000457602 POTEGQ6S5H5 508 aa13□□□□□ -0.33
LINC01888-202ENST00000457602 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
LINC01888-202ENST00000457602 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
LINC01888-202ENST00000457602 VPS8Q8N3P4 1428 aa12.98□□□□□ -0.33
LINC01888-202ENST00000457602 NCKAP5LQ9HCH0 1330 aa12.98□□□□□ -0.33
LINC01888-202ENST00000457602 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
LINC01888-202ENST00000457602 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
LINC01888-202ENST00000457602 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
LINC01888-202ENST00000457602 MYO3AQ8NEV4 1616 aa12.97□□□□□ -0.33
LINC01888-202ENST00000457602 C2orf72A6NCS6 295 aa12.96□□□□□ -0.33
LINC01888-202ENST00000457602 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
LINC01888-202ENST00000457602 LRRC9Q6ZRR7 1453 aa12.95□□□□□ -0.34
LINC01888-202ENST00000457602 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
LINC01888-202ENST00000457602 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
LINC01888-202ENST00000457602 PLA2R1Q13018 1463 aa12.93□□□□□ -0.34
LINC01888-202ENST00000457602 LTBP4Q8N2S1 1624 aa12.93□□□□□ -0.34
LINC01888-202ENST00000457602 ZNF335Q9H4Z2 1342 aaPredicted RBP12.92□□□□□ -0.34
LINC01888-202ENST00000457602 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
LINC01888-202ENST00000457602 KANK4Q5T7N3 995 aaPredicted RBP12.92□□□□□ -0.34
LINC01888-202ENST00000457602 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
LINC01888-202ENST00000457602 KDM5DQ9BY66 1539 aa12.92□□□□□ -0.34
LINC01888-202ENST00000457602 TNRQ92752 1358 aa12.92□□□□□ -0.34
LINC01888-202ENST00000457602 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
LINC01888-202ENST00000457602 PZPP20742 1482 aa12.9□□□□□ -0.34
LINC01888-202ENST00000457602 TCOF1Q13428 1488 aaKnown RBP12.9□□□□□ -0.34
LINC01888-202ENST00000457602 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
LINC01888-202ENST00000457602 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
LINC01888-202ENST00000457602 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
LINC01888-202ENST00000457602 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
LINC01888-202ENST00000457602 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
LINC01888-202ENST00000457602 TMC2Q8TDI7 906 aa12.88□□□□□ -0.35
LINC01888-202ENST00000457602 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms