RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 SUZ12Q15022 739 aaKnown RBP9.44□□□□□ -0.9
PCGEM1-201ENST00000454040 C11orf95C9JLR9 678 aaPredicted RBP9.43□□□□□ -0.9
PCGEM1-201ENST00000454040 HDGFP51858 240 aaKnown RBP9.43□□□□□ -0.9
PCGEM1-201ENST00000454040 MFSD10Q14728 455 aa9.43□□□□□ -0.9
PCGEM1-201ENST00000454040 PAXIP1Q6ZW49 1069 aaPredicted RBP9.43□□□□□ -0.9
PCGEM1-201ENST00000454040 SMAPO00193 183 aa9.42□□□□□ -0.9
PCGEM1-201ENST00000454040 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
PCGEM1-201ENST00000454040 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
PCGEM1-201ENST00000454040 RNF40O75150 1001 aa9.4□□□□□ -0.9
PCGEM1-201ENST00000454040 BBXQ8WY36 941 aaPredicted RBP9.4□□□□□ -0.9
PCGEM1-201ENST00000454040 GMPR2Q9P2T1 348 aaKnown RBP9.4□□□□□ -0.9
PCGEM1-201ENST00000454040 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
PCGEM1-201ENST00000454040 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
PCGEM1-201ENST00000454040 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
PCGEM1-201ENST00000454040 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
PCGEM1-201ENST00000454040 DACH1Q9UI36 760 aa9.38□□□□□ -0.91
PCGEM1-201ENST00000454040 TATDN2Q93075 761 aa9.37□□□□□ -0.91
PCGEM1-201ENST00000454040 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
PCGEM1-201ENST00000454040 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
PCGEM1-201ENST00000454040 PRSS12P56730 875 aa9.35□□□□□ -0.91
PCGEM1-201ENST00000454040 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
PCGEM1-201ENST00000454040 PNMA3Q9UL41 463 aa9.35□□□□□ -0.91
PCGEM1-201ENST00000454040 AVPP01185 164 aa9.34□□□□□ -0.91
PCGEM1-201ENST00000454040 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
PCGEM1-201ENST00000454040 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
PCGEM1-201ENST00000454040 TERTO14746 1132 aaKnown RBP9.33□□□□□ -0.92
PCGEM1-201ENST00000454040 AXIN1O15169 862 aa9.33□□□□□ -0.92
PCGEM1-201ENST00000454040 DNAJC5Q9H3Z4 198 aa9.33□□□□□ -0.92
PCGEM1-201ENST00000454040 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
PCGEM1-201ENST00000454040 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
PCGEM1-201ENST00000454040 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
PCGEM1-201ENST00000454040 MAP3K7O43318 606 aa9.32□□□□□ -0.92
PCGEM1-201ENST00000454040 NBR1Q14596 966 aa9.32□□□□□ -0.92
PCGEM1-201ENST00000454040 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
PCGEM1-201ENST00000454040 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
PCGEM1-201ENST00000454040 PRR14Q9BWN1 585 aa9.31□□□□□ -0.92
PCGEM1-201ENST00000454040 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
PCGEM1-201ENST00000454040 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
PCGEM1-201ENST00000454040 DDX12PQ92771 950 aa9.3□□□□□ -0.92
PCGEM1-201ENST00000454040 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
PCGEM1-201ENST00000454040 PPEF1O14829 653 aaPredicted RBP9.29□□□□□ -0.92
PCGEM1-201ENST00000454040 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
PCGEM1-201ENST00000454040 PKD2L1Q9P0L9 805 aa9.28□□□□□ -0.92
PCGEM1-201ENST00000454040 SUPT5HO00267 1087 aaKnown RBP9.27□□□□□ -0.93
PCGEM1-201ENST00000454040 S1PR4O95977 384 aa9.25□□□□□ -0.93
PCGEM1-201ENST00000454040 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
PCGEM1-201ENST00000454040 SLC4A3P48751 1232 aa9.25□□□□□ -0.93
PCGEM1-201ENST00000454040 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
PCGEM1-201ENST00000454040 FOXC1Q12948 553 aa9.24□□□□□ -0.93
PCGEM1-201ENST00000454040 BLOC1S3Q6QNY0 202 aa9.24□□□□□ -0.93
PCGEM1-201ENST00000454040 ZSCAN1Q8NBB4 408 aa9.24□□□□□ -0.93
PCGEM1-201ENST00000454040 DPYSL4O14531 572 aa9.24□□□□□ -0.93
PCGEM1-201ENST00000454040 SWT1Q5T5J6 900 aaKnown RBP9.24□□□□□ -0.93
PCGEM1-201ENST00000454040 TOR4AQ9NXH8 423 aa9.23□□□□□ -0.93
PCGEM1-201ENST00000454040 TLL1O43897 1013 aa9.22□□□□□ -0.93
PCGEM1-201ENST00000454040 CAMK2BQ13554 666 aa9.22□□□□□ -0.93
PCGEM1-201ENST00000454040 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
PCGEM1-201ENST00000454040 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.93
PCGEM1-201ENST00000454040 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
PCGEM1-201ENST00000454040 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
PCGEM1-201ENST00000454040 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
PCGEM1-201ENST00000454040 SENP2Q9HC62 589 aa9.2□□□□□ -0.94
PCGEM1-201ENST00000454040 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
PCGEM1-201ENST00000454040 CYP4X1Q8N118 509 aa9.19□□□□□ -0.94
PCGEM1-201ENST00000454040 PLA2G2CQ5R387 149 aa9.18□□□□□ -0.94
PCGEM1-201ENST00000454040 NPM2Q86SE8 214 aaKnown RBP9.18□□□□□ -0.94
PCGEM1-201ENST00000454040 TRIM47Q96LD4 638 aa9.18□□□□□ -0.94
PCGEM1-201ENST00000454040 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
PCGEM1-201ENST00000454040 ATP13A2Q9NQ11 1180 aa9.17□□□□□ -0.94
PCGEM1-201ENST00000454040 ADH1BP00325 375 aa9.16□□□□□ -0.94
PCGEM1-201ENST00000454040 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
PCGEM1-201ENST00000454040 RPIAP49247 311 aa9.14□□□□□ -0.95
PCGEM1-201ENST00000454040 GMPRP36959 345 aa9.13□□□□□ -0.95
PCGEM1-201ENST00000454040 KIFC2Q96AC6 838 aa9.13□□□□□ -0.95
PCGEM1-201ENST00000454040 SLC6A16Q9GZN6 736 aa9.13□□□□□ -0.95
PCGEM1-201ENST00000454040 ACTN4O43707 911 aaKnown RBP9.09□□□□□ -0.95
PCGEM1-201ENST00000454040 CD2BP2O95400 341 aaKnown RBP9.09□□□□□ -0.95
PCGEM1-201ENST00000454040 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
PCGEM1-201ENST00000454040 IRF7Q92985 503 aa9.09□□□□□ -0.95
PCGEM1-201ENST00000454040 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
PCGEM1-201ENST00000454040 PDIA6Q15084 440 aa9.08□□□□□ -0.96
PCGEM1-201ENST00000454040 HRCP23327 699 aa9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 KMT5BQ4FZB7 885 aa9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 NXF1Q9UBU9 619 aaKnown RBP9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 TTC24A2A3L6 582 aaPredicted RBP9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 NR1I2O75469 434 aa9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 NPAS3Q8IXF0 933 aa9.07□□□□□ -0.96
PCGEM1-201ENST00000454040 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
PCGEM1-201ENST00000454040 PRIM1P49642 420 aaKnown RBP9.05□□□□□ -0.96
PCGEM1-201ENST00000454040 KCNMA1Q12791 1236 aa9.05□□□□□ -0.96
PCGEM1-201ENST00000454040 EYA1Q99502 592 aa9.03□□□□□ -0.96
PCGEM1-201ENST00000454040 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
PCGEM1-201ENST00000454040 CDHR5Q9HBB8 845 aa9.02□□□□□ -0.97
PCGEM1-201ENST00000454040 SMPD1P17405 629 aa9.01□□□□□ -0.97
PCGEM1-201ENST00000454040 PADI6Q6TGC4 694 aa9□□□□□ -0.97
PCGEM1-201ENST00000454040 SNIP1Q8TAD8 396 aaKnown RBP8.99□□□□□ -0.97
PCGEM1-201ENST00000454040 ZCCHC6Q5VYS8 1495 aaKnown RBP8.99□□□□□ -0.97
PCGEM1-201ENST00000454040 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.97
PCGEM1-201ENST00000454040 H3BM21 787 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms