RNA–Protein interactions for RNA: ENST00000449581.1

LINC01428-201, Transcript of long intergenic non-protein coding RNA 1428, humanhuman

TSL 1 (best) BASIC

Gene LINC01428, Length 874 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01428-201ENST00000449581 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
LINC01428-201ENST00000449581 AAMPQ13685 434 aa16.96■□□□□ 0.31
LINC01428-201ENST00000449581 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
LINC01428-201ENST00000449581 ABCC1P33527 1531 aa16.96■□□□□ 0.3
LINC01428-201ENST00000449581 TET3O43151 1660 aa16.95■□□□□ 0.3
LINC01428-201ENST00000449581 TESK2Q96S53 571 aa16.95■□□□□ 0.3
LINC01428-201ENST00000449581 BACH2Q9BYV9 841 aa16.95■□□□□ 0.3
LINC01428-201ENST00000449581 PLCH2O75038 1416 aa16.95■□□□□ 0.3
LINC01428-201ENST00000449581 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC01428-201ENST00000449581 ASXL1Q8IXJ9 1541 aa16.94■□□□□ 0.3
LINC01428-201ENST00000449581 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
LINC01428-201ENST00000449581 KDM2AQ9Y2K7 1162 aa16.93■□□□□ 0.3
LINC01428-201ENST00000449581 PTPRTO14522 1441 aa16.93■□□□□ 0.3
LINC01428-201ENST00000449581 ZMYM3Q14202 1370 aa16.92■□□□□ 0.3
LINC01428-201ENST00000449581 PDE4AP27815 886 aa16.91■□□□□ 0.3
LINC01428-201ENST00000449581 MYOM2P54296 1465 aa16.91■□□□□ 0.3
LINC01428-201ENST00000449581 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
LINC01428-201ENST00000449581 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
LINC01428-201ENST00000449581 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
LINC01428-201ENST00000449581 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
LINC01428-201ENST00000449581 KANK1Q14678 1352 aa16.89■□□□□ 0.29
LINC01428-201ENST00000449581 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.29
LINC01428-201ENST00000449581 CHD1O14646 1710 aa16.88■□□□□ 0.29
LINC01428-201ENST00000449581 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC01428-201ENST00000449581 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
LINC01428-201ENST00000449581 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
LINC01428-201ENST00000449581 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
LINC01428-201ENST00000449581 MYO3AQ8NEV4 1616 aa16.86■□□□□ 0.29
LINC01428-201ENST00000449581 PANK3Q9H999 370 aa16.85■□□□□ 0.29
LINC01428-201ENST00000449581 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
LINC01428-201ENST00000449581 GOLGA2Q08379 1002 aa16.83■□□□□ 0.28
LINC01428-201ENST00000449581 ZFYVE16Q7Z3T8 1539 aa16.83■□□□□ 0.28
LINC01428-201ENST00000449581 ZNF521Q96K83 1311 aa16.83■□□□□ 0.28
LINC01428-201ENST00000449581 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
LINC01428-201ENST00000449581 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
LINC01428-201ENST00000449581 MYOM1P52179 1685 aa16.81■□□□□ 0.28
LINC01428-201ENST00000449581 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
LINC01428-201ENST00000449581 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
LINC01428-201ENST00000449581 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
LINC01428-201ENST00000449581 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
LINC01428-201ENST00000449581 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
LINC01428-201ENST00000449581 USP32Q8NFA0 1604 aa16.79■□□□□ 0.28
LINC01428-201ENST00000449581 MAP3K4Q9Y6R4 1608 aa16.79■□□□□ 0.28
LINC01428-201ENST00000449581 FAM161AQ3B820 660 aa16.79■□□□□ 0.28
LINC01428-201ENST00000449581 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
LINC01428-201ENST00000449581 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
LINC01428-201ENST00000449581 KIF1BO60333 1816 aa16.78■□□□□ 0.28
LINC01428-201ENST00000449581 E9PSI1 815 aa16.78■□□□□ 0.28
LINC01428-201ENST00000449581 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
LINC01428-201ENST00000449581 NBPF1Q3BBV0 1214 aa16.78■□□□□ 0.28
LINC01428-201ENST00000449581 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
LINC01428-201ENST00000449581 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
LINC01428-201ENST00000449581 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
LINC01428-201ENST00000449581 TRMT2AQ8IZ69 625 aaKnown RBP16.77■□□□□ 0.28
LINC01428-201ENST00000449581 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
LINC01428-201ENST00000449581 NBR1Q14596 966 aa16.76■□□□□ 0.27
LINC01428-201ENST00000449581 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
LINC01428-201ENST00000449581 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
LINC01428-201ENST00000449581 ABCA9Q8IUA7 1624 aa16.76■□□□□ 0.27
LINC01428-201ENST00000449581 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
LINC01428-201ENST00000449581 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
LINC01428-201ENST00000449581 SPAG9O60271 1321 aaKnown RBP16.75■□□□□ 0.27
LINC01428-201ENST00000449581 FANCAO15360 1455 aa16.75■□□□□ 0.27
LINC01428-201ENST00000449581 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
LINC01428-201ENST00000449581 CRBNQ96SW2 442 aa16.75■□□□□ 0.27
LINC01428-201ENST00000449581 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
LINC01428-201ENST00000449581 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
LINC01428-201ENST00000449581 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
LINC01428-201ENST00000449581 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
LINC01428-201ENST00000449581 FBXO41Q8TF61 875 aa16.74■□□□□ 0.27
LINC01428-201ENST00000449581 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
LINC01428-201ENST00000449581 EFCAB6Q5THR3 1501 aa16.71■□□□□ 0.27
LINC01428-201ENST00000449581 NEFMP07197 916 aa16.71■□□□□ 0.27
LINC01428-201ENST00000449581 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
LINC01428-201ENST00000449581 NSD2O96028 1365 aa16.71■□□□□ 0.27
LINC01428-201ENST00000449581 ADGRL1O94910 1474 aa16.71■□□□□ 0.27
LINC01428-201ENST00000449581 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
LINC01428-201ENST00000449581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC01428-201ENST00000449581 PLEKHH1Q9ULM0 1364 aa16.69■□□□□ 0.26
LINC01428-201ENST00000449581 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
LINC01428-201ENST00000449581 CT47B1P0C2W7 299 aaPredicted RBP16.68■□□□□ 0.26
LINC01428-201ENST00000449581 TRAPPC8Q9Y2L5 1435 aa16.68■□□□□ 0.26
LINC01428-201ENST00000449581 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
LINC01428-201ENST00000449581 BECN1Q14457 450 aa16.66■□□□□ 0.26
LINC01428-201ENST00000449581 RPGRIP1LQ68CZ1 1315 aa16.66■□□□□ 0.26
LINC01428-201ENST00000449581 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
LINC01428-201ENST00000449581 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
LINC01428-201ENST00000449581 ERVK-7P63135 1459 aa16.65■□□□□ 0.26
LINC01428-201ENST00000449581 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
LINC01428-201ENST00000449581 ZC3H13Q5T200 1668 aaKnown RBP16.64■□□□□ 0.25
LINC01428-201ENST00000449581 CCDC27Q2M243 656 aa16.63■□□□□ 0.25
LINC01428-201ENST00000449581 MROH1Q8NDA8 1641 aa16.63■□□□□ 0.25
LINC01428-201ENST00000449581 GSE1Q14687 1217 aa16.61■□□□□ 0.25
LINC01428-201ENST00000449581 WDR63Q8IWG1 891 aa16.61■□□□□ 0.25
LINC01428-201ENST00000449581 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
LINC01428-201ENST00000449581 UPF2Q9HAU5 1272 aaKnown RBP16.6■□□□□ 0.25
LINC01428-201ENST00000449581 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
LINC01428-201ENST00000449581 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
LINC01428-201ENST00000449581 CFAP53Q96M91 514 aa16.59■□□□□ 0.25
LINC01428-201ENST00000449581 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms