RNA–Protein interactions for RNA: ENST00000448492.6

CCDC117-205, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2 BASIC

Gene CCDC117, Length 3,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-205ENST00000448492 ERBINQ96RT1 1412 aa17.28■□□□□ 0.36
CCDC117-205ENST00000448492 L1TD1Q5T7N2 865 aaKnown RBP17.27■□□□□ 0.36
CCDC117-205ENST00000448492 KANK1Q14678 1352 aa17.26■□□□□ 0.35
CCDC117-205ENST00000448492 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
CCDC117-205ENST00000448492 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
CCDC117-205ENST00000448492 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
CCDC117-205ENST00000448492 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
CCDC117-205ENST00000448492 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
CCDC117-205ENST00000448492 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
CCDC117-205ENST00000448492 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
CCDC117-205ENST00000448492 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
CCDC117-205ENST00000448492 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
CCDC117-205ENST00000448492 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
CCDC117-205ENST00000448492 MS4A1P11836 297 aa17.23■□□□□ 0.35
CCDC117-205ENST00000448492 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
CCDC117-205ENST00000448492 GOLGA6L3A6NEY3 463 aa17.22■□□□□ 0.35
CCDC117-205ENST00000448492 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
CCDC117-205ENST00000448492 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
CCDC117-205ENST00000448492 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
CCDC117-205ENST00000448492 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
CCDC117-205ENST00000448492 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
CCDC117-205ENST00000448492 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
CCDC117-205ENST00000448492 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
CCDC117-205ENST00000448492 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
CCDC117-205ENST00000448492 POGKQ9P215 609 aa17.18■□□□□ 0.34
CCDC117-205ENST00000448492 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
CCDC117-205ENST00000448492 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
CCDC117-205ENST00000448492 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
CCDC117-205ENST00000448492 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
CCDC117-205ENST00000448492 E9PSI1 815 aa17.17■□□□□ 0.34
CCDC117-205ENST00000448492 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
CCDC117-205ENST00000448492 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
CCDC117-205ENST00000448492 MTHFSP49914 203 aa17.16■□□□□ 0.34
CCDC117-205ENST00000448492 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
CCDC117-205ENST00000448492 MYH16Q9H6N6 1097 aa17.15■□□□□ 0.34
CCDC117-205ENST00000448492 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
CCDC117-205ENST00000448492 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
CCDC117-205ENST00000448492 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
CCDC117-205ENST00000448492 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
CCDC117-205ENST00000448492 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
CCDC117-205ENST00000448492 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
CCDC117-205ENST00000448492 FAM13BQ9NYF5 915 aa17.14■□□□□ 0.33
CCDC117-205ENST00000448492 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
CCDC117-205ENST00000448492 MLECQ14165 292 aa17.14■□□□□ 0.33
CCDC117-205ENST00000448492 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
CCDC117-205ENST00000448492 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
CCDC117-205ENST00000448492 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
CCDC117-205ENST00000448492 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
CCDC117-205ENST00000448492 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
CCDC117-205ENST00000448492 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
CCDC117-205ENST00000448492 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
CCDC117-205ENST00000448492 DNTTIP2Q5QJE6 756 aaKnown RBP17.12■□□□□ 0.33
CCDC117-205ENST00000448492 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
CCDC117-205ENST00000448492 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
CCDC117-205ENST00000448492 ADGRL2O95490 1459 aa17.11■□□□□ 0.33
CCDC117-205ENST00000448492 SOX12O15370 315 aa17.11■□□□□ 0.33
CCDC117-205ENST00000448492 A2MP01023 1474 aa17.1■□□□□ 0.33
CCDC117-205ENST00000448492 MFAP1P55081 439 aaKnown RBP17.1■□□□□ 0.33
CCDC117-205ENST00000448492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC117-205ENST00000448492 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
CCDC117-205ENST00000448492 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
CCDC117-205ENST00000448492 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
CCDC117-205ENST00000448492 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
CCDC117-205ENST00000448492 KDM5CP41229 1560 aa17.08■□□□□ 0.33
CCDC117-205ENST00000448492 IGHDP01880 384 aa17.08■□□□□ 0.33
CCDC117-205ENST00000448492 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
CCDC117-205ENST00000448492 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
CCDC117-205ENST00000448492 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
CCDC117-205ENST00000448492 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
CCDC117-205ENST00000448492 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
CCDC117-205ENST00000448492 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
CCDC117-205ENST00000448492 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
CCDC117-205ENST00000448492 NUP160Q12769 1436 aa17.04■□□□□ 0.32
CCDC117-205ENST00000448492 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
CCDC117-205ENST00000448492 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
CCDC117-205ENST00000448492 ABCC10Q5T3U5 1492 aa17.04■□□□□ 0.32
CCDC117-205ENST00000448492 APBB1O00213 710 aa17.03■□□□□ 0.32
CCDC117-205ENST00000448492 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
CCDC117-205ENST00000448492 ARHGEF12Q9NZN5 1544 aa17.02■□□□□ 0.32
CCDC117-205ENST00000448492 RAPGEF3O95398 923 aa17.02■□□□□ 0.31
CCDC117-205ENST00000448492 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.31
CCDC117-205ENST00000448492 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
CCDC117-205ENST00000448492 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
CCDC117-205ENST00000448492 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
CCDC117-205ENST00000448492 RRP9O43818 475 aaKnown RBP17.01■□□□□ 0.31
CCDC117-205ENST00000448492 COL17A1Q9UMD9 1497 aaPredicted RBP17■□□□□ 0.31
CCDC117-205ENST00000448492 FBLN1P23142 703 aa17■□□□□ 0.31
CCDC117-205ENST00000448492 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
CCDC117-205ENST00000448492 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
CCDC117-205ENST00000448492 SEC24BO95487 1268 aa16.98■□□□□ 0.31
CCDC117-205ENST00000448492 C8orf34Q49A92 452 aa16.98■□□□□ 0.31
CCDC117-205ENST00000448492 SHANK2Q9UPX8 1470 aa16.98■□□□□ 0.31
CCDC117-205ENST00000448492 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
CCDC117-205ENST00000448492 ZKSCAN2Q63HK3 967 aa16.98■□□□□ 0.31
CCDC117-205ENST00000448492 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
CCDC117-205ENST00000448492 HMOX1P09601 288 aa16.98■□□□□ 0.31
CCDC117-205ENST00000448492 RIPK4P57078 832 aa16.97■□□□□ 0.31
CCDC117-205ENST00000448492 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
CCDC117-205ENST00000448492 CDK11BP21127 795 aaKnown RBP16.97■□□□□ 0.31
CCDC117-205ENST00000448492 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms