RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 DDX19BQ9UMR2 479 aa14.04□□□□□ -0.16
ZNF550-204ENST00000447310 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
ZNF550-204ENST00000447310 UGGT2Q9NYU1 1516 aa14.03□□□□□ -0.16
ZNF550-204ENST00000447310 CFAP43Q8NDM7 1665 aa14.03□□□□□ -0.16
ZNF550-204ENST00000447310 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
ZNF550-204ENST00000447310 SOX12O15370 315 aa14.03□□□□□ -0.16
ZNF550-204ENST00000447310 MTHFSP49914 203 aa14.03□□□□□ -0.16
ZNF550-204ENST00000447310 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
ZNF550-204ENST00000447310 TRAK2O60296 914 aa14.02□□□□□ -0.16
ZNF550-204ENST00000447310 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.17
ZNF550-204ENST00000447310 CC2D2AQ9P2K1 1620 aa14.02□□□□□ -0.17
ZNF550-204ENST00000447310 CAMSAP2Q08AD1 1489 aa14.02□□□□□ -0.17
ZNF550-204ENST00000447310 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
ZNF550-204ENST00000447310 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
ZNF550-204ENST00000447310 IQGAP2Q13576 1575 aa14□□□□□ -0.17
ZNF550-204ENST00000447310 CFAP44Q96MT7 982 aa14□□□□□ -0.17
ZNF550-204ENST00000447310 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
ZNF550-204ENST00000447310 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
ZNF550-204ENST00000447310 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
ZNF550-204ENST00000447310 AAMPQ13685 434 aa13.99□□□□□ -0.17
ZNF550-204ENST00000447310 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
ZNF550-204ENST00000447310 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
ZNF550-204ENST00000447310 RIPK4P57078 832 aa13.99□□□□□ -0.17
ZNF550-204ENST00000447310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
ZNF550-204ENST00000447310 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
ZNF550-204ENST00000447310 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
ZNF550-204ENST00000447310 SKOR2Q2VWA4 1001 aaPredicted RBP13.98□□□□□ -0.17
ZNF550-204ENST00000447310 MRE11P49959 708 aa13.98□□□□□ -0.17
ZNF550-204ENST00000447310 TMEM132EQ6IEE7 984 aa13.98□□□□□ -0.17
ZNF550-204ENST00000447310 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
ZNF550-204ENST00000447310 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
ZNF550-204ENST00000447310 MCCP23508 829 aa13.97□□□□□ -0.17
ZNF550-204ENST00000447310 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
ZNF550-204ENST00000447310 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
ZNF550-204ENST00000447310 EVC2Q86UK5 1308 aa13.97□□□□□ -0.17
ZNF550-204ENST00000447310 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
ZNF550-204ENST00000447310 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
ZNF550-204ENST00000447310 PLB1Q6P1J6 1458 aa13.96□□□□□ -0.17
ZNF550-204ENST00000447310 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.18
ZNF550-204ENST00000447310 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.18
ZNF550-204ENST00000447310 KIAA0586Q9BVV6 1533 aa13.96□□□□□ -0.18
ZNF550-204ENST00000447310 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
ZNF550-204ENST00000447310 IGHDP01880 384 aa13.95□□□□□ -0.18
ZNF550-204ENST00000447310 MCM4P33991 863 aa13.95□□□□□ -0.18
ZNF550-204ENST00000447310 GGNBP2Q9H3C7 697 aa13.95□□□□□ -0.18
ZNF550-204ENST00000447310 TCOF1Q13428 1488 aaKnown RBP13.94□□□□□ -0.18
ZNF550-204ENST00000447310 ST18O60284 1047 aa13.94□□□□□ -0.18
ZNF550-204ENST00000447310 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
ZNF550-204ENST00000447310 C8orf34Q49A92 452 aa13.93□□□□□ -0.18
ZNF550-204ENST00000447310 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
ZNF550-204ENST00000447310 PARD3Q8TEW0 1356 aa13.93□□□□□ -0.18
ZNF550-204ENST00000447310 MLECQ14165 292 aa13.93□□□□□ -0.18
ZNF550-204ENST00000447310 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
ZNF550-204ENST00000447310 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
ZNF550-204ENST00000447310 ARHGAP5Q13017 1502 aa13.92□□□□□ -0.18
ZNF550-204ENST00000447310 OS9Q13438 667 aaPredicted RBP13.92□□□□□ -0.18
ZNF550-204ENST00000447310 FOXD4L6Q3SYB3 417 aaPredicted RBP13.92□□□□□ -0.18
ZNF550-204ENST00000447310 FOXD4L3Q6VB84 417 aaPredicted RBP13.92□□□□□ -0.18
ZNF550-204ENST00000447310 KIF16BQ96L93 1317 aa13.92□□□□□ -0.18
ZNF550-204ENST00000447310 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
ZNF550-204ENST00000447310 RALGAPBQ86X10 1494 aa13.92□□□□□ -0.18
ZNF550-204ENST00000447310 KCNJ4P48050 445 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 MVPQ14764 893 aaKnown RBP13.91□□□□□ -0.18
ZNF550-204ENST00000447310 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 PER1O15534 1290 aaPredicted RBP13.91□□□□□ -0.18
ZNF550-204ENST00000447310 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 TEX14Q8IWB6 1497 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 TRIM6-TRIM34B2RNG4 842 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 KIAA2012Q0VF49 1180 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 TBC1D2Q9BYX2 928 aa13.91□□□□□ -0.18
ZNF550-204ENST00000447310 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
ZNF550-204ENST00000447310 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
ZNF550-204ENST00000447310 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
ZNF550-204ENST00000447310 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
ZNF550-204ENST00000447310 WDR63Q8IWG1 891 aa13.9□□□□□ -0.18
ZNF550-204ENST00000447310 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.19
ZNF550-204ENST00000447310 GPATCH8Q9UKJ3 1502 aaKnown RBP13.89□□□□□ -0.19
ZNF550-204ENST00000447310 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
ZNF550-204ENST00000447310 HMMRO75330 724 aa13.89□□□□□ -0.19
ZNF550-204ENST00000447310 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
ZNF550-204ENST00000447310 MCTP1Q6DN14 999 aa13.89□□□□□ -0.19
ZNF550-204ENST00000447310 SYAP1Q96A49 352 aaPredicted RBP13.89□□□□□ -0.19
ZNF550-204ENST00000447310 C1orf115Q9H7X2 142 aa13.88□□□□□ -0.19
ZNF550-204ENST00000447310 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
ZNF550-204ENST00000447310 HMOX1P09601 288 aa13.88□□□□□ -0.19
ZNF550-204ENST00000447310 GRPEL1Q9HAV7 217 aa13.88□□□□□ -0.19
ZNF550-204ENST00000447310 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
ZNF550-204ENST00000447310 CHAF1AQ13111 956 aaPredicted RBP13.87□□□□□ -0.19
ZNF550-204ENST00000447310 TESK2Q96S53 571 aa13.87□□□□□ -0.19
ZNF550-204ENST00000447310 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
ZNF550-204ENST00000447310 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
ZNF550-204ENST00000447310 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
ZNF550-204ENST00000447310 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
ZNF550-204ENST00000447310 CTTNBP2Q8WZ74 1663 aa13.86□□□□□ -0.19
ZNF550-204ENST00000447310 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
ZNF550-204ENST00000447310 FAM13BQ9NYF5 915 aa13.86□□□□□ -0.19
ZNF550-204ENST00000447310 PZPP20742 1482 aa13.86□□□□□ -0.19
ZNF550-204ENST00000447310 KIAA1211Q6ZU35 1233 aa13.86□□□□□ -0.19
ZNF550-204ENST00000447310 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms