RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 GCC2Q8IWJ2 1684 aa14.43□□□□□ -0.1
LIN54-203ENST00000446851 ATF3P18847 181 aa14.43□□□□□ -0.1
LIN54-203ENST00000446851 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
LIN54-203ENST00000446851 ZEB1P37275 1124 aaPredicted RBP14.42□□□□□ -0.1
LIN54-203ENST00000446851 NBPF8Q3BBV2 869 aa14.42□□□□□ -0.1
LIN54-203ENST00000446851 ARHGAP31Q2M1Z3 1444 aa14.41□□□□□ -0.1
LIN54-203ENST00000446851 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
LIN54-203ENST00000446851 EIF2AK4Q9P2K8 1649 aaKnown RBP14.41□□□□□ -0.1
LIN54-203ENST00000446851 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
LIN54-203ENST00000446851 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
LIN54-203ENST00000446851 CAMSAP1Q5T5Y3 1602 aa14.4□□□□□ -0.1
LIN54-203ENST00000446851 A2ML1A8K2U0 1454 aa14.4□□□□□ -0.1
LIN54-203ENST00000446851 RPRD2Q5VT52 1461 aaKnown RBP14.4□□□□□ -0.1
LIN54-203ENST00000446851 REREQ9P2R6 1566 aa14.4□□□□□ -0.1
LIN54-203ENST00000446851 ZBTB7CA1YPR0 619 aa14.39□□□□□ -0.11
LIN54-203ENST00000446851 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
LIN54-203ENST00000446851 MROH1Q8NDA8 1641 aa14.38□□□□□ -0.11
LIN54-203ENST00000446851 NPHP4O75161 1426 aaPredicted RBP14.38□□□□□ -0.11
LIN54-203ENST00000446851 C3P01024 1663 aa14.38□□□□□ -0.11
LIN54-203ENST00000446851 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
LIN54-203ENST00000446851 SOX12O15370 315 aa14.37□□□□□ -0.11
LIN54-203ENST00000446851 XPCQ01831 940 aaPredicted RBP14.37□□□□□ -0.11
LIN54-203ENST00000446851 TET3O43151 1660 aa14.37□□□□□ -0.11
LIN54-203ENST00000446851 LMTK3Q96Q04 1460 aa14.37□□□□□ -0.11
LIN54-203ENST00000446851 HAP1P54257 671 aaPredicted RBP14.36□□□□□ -0.11
LIN54-203ENST00000446851 RNF17Q9BXT8 1623 aaKnown RBP14.36□□□□□ -0.11
LIN54-203ENST00000446851 UNC13BO14795 1591 aa14.36□□□□□ -0.11
LIN54-203ENST00000446851 SCAF11Q99590 1463 aaKnown RBP14.36□□□□□ -0.11
LIN54-203ENST00000446851 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIN54-203ENST00000446851 IQGAP3Q86VI3 1631 aa14.36□□□□□ -0.11
LIN54-203ENST00000446851 ST20-MTHFSA0A0A6YYL1 179 aa14.36□□□□□ -0.11
LIN54-203ENST00000446851 E9PCH4 1651 aa14.35□□□□□ -0.11
LIN54-203ENST00000446851 ESCO1Q5FWF5 840 aa14.35□□□□□ -0.11
LIN54-203ENST00000446851 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
LIN54-203ENST00000446851 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
LIN54-203ENST00000446851 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
LIN54-203ENST00000446851 CEP170BQ9Y4F5 1589 aaPredicted RBP14.34□□□□□ -0.11
LIN54-203ENST00000446851 PTPRTO14522 1441 aa14.33□□□□□ -0.11
LIN54-203ENST00000446851 NGDNQ8NEJ9 315 aaKnown RBP14.33□□□□□ -0.12
LIN54-203ENST00000446851 C14orf93Q9H972 538 aaKnown RBP14.33□□□□□ -0.12
LIN54-203ENST00000446851 METP08581 1390 aa14.32□□□□□ -0.12
LIN54-203ENST00000446851 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
LIN54-203ENST00000446851 LMTK2Q8IWU2 1503 aa14.32□□□□□ -0.12
LIN54-203ENST00000446851 PIK3C2BO00750 1634 aa14.3□□□□□ -0.12
LIN54-203ENST00000446851 PREX1Q8TCU6 1659 aa14.3□□□□□ -0.12
LIN54-203ENST00000446851 TOM1O60784 492 aa14.3□□□□□ -0.12
LIN54-203ENST00000446851 SYNMO15061 1565 aa14.3□□□□□ -0.12
LIN54-203ENST00000446851 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
LIN54-203ENST00000446851 CENPJQ9HC77 1338 aaPredicted RBP14.29□□□□□ -0.12
LIN54-203ENST00000446851 TMEM94Q12767 1356 aa14.29□□□□□ -0.12
LIN54-203ENST00000446851 TRPM2O94759 1503 aa14.29□□□□□ -0.12
LIN54-203ENST00000446851 SPATA31D1Q6ZQQ2 1576 aa14.29□□□□□ -0.12
LIN54-203ENST00000446851 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
LIN54-203ENST00000446851 FOXO3O43524 673 aa14.28□□□□□ -0.12
LIN54-203ENST00000446851 DEPDC5O75140 1603 aa14.28□□□□□ -0.12
LIN54-203ENST00000446851 NUTM2GQ5VZR2 741 aa14.28□□□□□ -0.12
LIN54-203ENST00000446851 CERKQ8TCT0 537 aa14.28□□□□□ -0.12
LIN54-203ENST00000446851 DDX17Q92841 729 aaKnown RBP14.28□□□□□ -0.12
LIN54-203ENST00000446851 VWDEQ8N2E2 1590 aa14.27□□□□□ -0.12
LIN54-203ENST00000446851 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
LIN54-203ENST00000446851 PLEKHG1Q9ULL1 1385 aa14.27□□□□□ -0.13
LIN54-203ENST00000446851 STAC3Q96MF2 364 aa14.27□□□□□ -0.13
LIN54-203ENST00000446851 MSH6P52701 1360 aa14.26□□□□□ -0.13
LIN54-203ENST00000446851 TIMELESSQ9UNS1 1208 aa14.26□□□□□ -0.13
LIN54-203ENST00000446851 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
LIN54-203ENST00000446851 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
LIN54-203ENST00000446851 PSME1Q06323 249 aa14.26□□□□□ -0.13
LIN54-203ENST00000446851 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
LIN54-203ENST00000446851 SPATA31E1Q6ZUB1 1445 aa14.26□□□□□ -0.13
LIN54-203ENST00000446851 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
LIN54-203ENST00000446851 SPHKAPQ2M3C7 1700 aa14.25□□□□□ -0.13
LIN54-203ENST00000446851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.25□□□□□ -0.135e-6■■■□□ 15.5
LIN54-203ENST00000446851 CDK19Q9BWU1 502 aa14.25□□□□□ -0.13
LIN54-203ENST00000446851 ADGRB3O60242 1522 aa14.24□□□□□ -0.13
LIN54-203ENST00000446851 TMF1P82094 1093 aa14.24□□□□□ -0.13
LIN54-203ENST00000446851 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
LIN54-203ENST00000446851 MYO3AQ8NEV4 1616 aa14.24□□□□□ -0.13
LIN54-203ENST00000446851 TNNT2P45379 298 aaPredicted RBP14.24□□□□□ -0.13
LIN54-203ENST00000446851 ORAI2Q96SN7 254 aa14.23□□□□□ -0.13
LIN54-203ENST00000446851 USP47Q96K76 1375 aa14.23□□□□□ -0.13
LIN54-203ENST00000446851 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
LIN54-203ENST00000446851 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
LIN54-203ENST00000446851 SLAIN2Q9P270 581 aa14.22□□□□□ -0.13
LIN54-203ENST00000446851 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
LIN54-203ENST00000446851 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
LIN54-203ENST00000446851 EVC2Q86UK5 1308 aa14.21□□□□□ -0.14
LIN54-203ENST00000446851 KIF1BO60333 1816 aa14.2□□□□□ -0.14
LIN54-203ENST00000446851 CABP1Q9NZU7 370 aa14.2□□□□□ -0.14
LIN54-203ENST00000446851 ROBO2Q9HCK4 1378 aa14.2□□□□□ -0.14
LIN54-203ENST00000446851 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
LIN54-203ENST00000446851 MROH2AA6NES4 1674 aa14.19□□□□□ -0.14
LIN54-203ENST00000446851 NUDT16Q96DE0 195 aaKnown RBP14.18□□□□□ -0.14
LIN54-203ENST00000446851 PRAG1Q86YV5 1406 aa14.18□□□□□ -0.14
LIN54-203ENST00000446851 SLC12A5Q9H2X9 1139 aa14.18□□□□□ -0.14
LIN54-203ENST00000446851 ZFYVE9O95405 1425 aa14.18□□□□□ -0.14
LIN54-203ENST00000446851 A0A0G2JS52 829 aa14.17□□□□□ -0.14
LIN54-203ENST00000446851 MYT1Q01538 1121 aa14.17□□□□□ -0.14
LIN54-203ENST00000446851 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
LIN54-203ENST00000446851 MEX3CQ5U5Q3 659 aaKnown RBP14.16□□□□□ -0.14
LIN54-203ENST00000446851 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms