RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 BACH2Q9BYV9 841 aa20.31■□□□□ 0.84
APP-208ENST00000439274 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
APP-208ENST00000439274 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
APP-208ENST00000439274 PLEKHH1Q9ULM0 1364 aa20.29■□□□□ 0.84
APP-208ENST00000439274 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
APP-208ENST00000439274 IQGAP1P46940 1657 aa20.28■□□□□ 0.84
APP-208ENST00000439274 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
APP-208ENST00000439274 SPAG9O60271 1321 aaKnown RBP20.27■□□□□ 0.84
APP-208ENST00000439274 MS4A1P11836 297 aa20.27■□□□□ 0.84
APP-208ENST00000439274 INO80Q9ULG1 1556 aaPredicted RBP20.26■□□□□ 0.83
APP-208ENST00000439274 CYB5RLQ6IPT4 315 aa20.26■□□□□ 0.83
APP-208ENST00000439274 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
APP-208ENST00000439274 TRPM2O94759 1503 aa20.24■□□□□ 0.83
APP-208ENST00000439274 SCAF11Q99590 1463 aaKnown RBP20.24■□□□□ 0.83
APP-208ENST00000439274 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
APP-208ENST00000439274 CLTCL1P53675 1640 aa20.23■□□□□ 0.83
APP-208ENST00000439274 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
APP-208ENST00000439274 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
APP-208ENST00000439274 CD109Q6YHK3 1445 aa20.22■□□□□ 0.83
APP-208ENST00000439274 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
APP-208ENST00000439274 SYNMO15061 1565 aa20.21■□□□□ 0.83
APP-208ENST00000439274 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
APP-208ENST00000439274 ATP7AQ04656 1500 aa20.21■□□□□ 0.83
APP-208ENST00000439274 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
APP-208ENST00000439274 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
APP-208ENST00000439274 CEP152O94986 1710 aa20.21■□□□□ 0.83
APP-208ENST00000439274 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
APP-208ENST00000439274 CFAP74Q9C0B2 1584 aa20.2■□□□□ 0.82
APP-208ENST00000439274 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
APP-208ENST00000439274 PTPRTO14522 1441 aa20.2■□□□□ 0.82
APP-208ENST00000439274 CDCA8Q53HL2 280 aa20.2■□□□□ 0.82
APP-208ENST00000439274 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
APP-208ENST00000439274 MAP3K4Q9Y6R4 1608 aa20.18■□□□□ 0.82
APP-208ENST00000439274 MYOM1P52179 1685 aa20.18■□□□□ 0.82
APP-208ENST00000439274 KDM2BQ8NHM5 1336 aa20.17■□□□□ 0.82
APP-208ENST00000439274 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
APP-208ENST00000439274 CFAP70Q5T0N1 1121 aa20.15■□□□□ 0.82
APP-208ENST00000439274 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
APP-208ENST00000439274 SPINK5Q9NQ38 1064 aaPredicted RBP20.15■□□□□ 0.82
APP-208ENST00000439274 KIF3BO15066 747 aa20.14■□□□□ 0.82
APP-208ENST00000439274 SLFN5Q08AF3 891 aa20.14■□□□□ 0.82
APP-208ENST00000439274 UGGT1Q9NYU2 1555 aa20.14■□□□□ 0.81
APP-208ENST00000439274 DEPDC5O75140 1603 aa20.13■□□□□ 0.81
APP-208ENST00000439274 GLI2P10070 1586 aa20.13■□□□□ 0.81
APP-208ENST00000439274 TET3O43151 1660 aa20.13■□□□□ 0.81
APP-208ENST00000439274 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
APP-208ENST00000439274 APAF1O14727 1248 aa20.13■□□□□ 0.81
APP-208ENST00000439274 POGZQ7Z3K3 1410 aa20.12■□□□□ 0.81
APP-208ENST00000439274 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
APP-208ENST00000439274 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
APP-208ENST00000439274 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
APP-208ENST00000439274 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
APP-208ENST00000439274 KANK1Q14678 1352 aa20.11■□□□□ 0.81
APP-208ENST00000439274 CENPQQ7L2Z9 268 aaPredicted RBP20.11■□□□□ 0.81
APP-208ENST00000439274 KDM5AP29375 1690 aaKnown RBP20.1■□□□□ 0.81
APP-208ENST00000439274 NEFMP07197 916 aa20.1■□□□□ 0.81
APP-208ENST00000439274 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
APP-208ENST00000439274 CARD14Q9BXL6 1004 aa20.09■□□□□ 0.81
APP-208ENST00000439274 NEO1Q92859 1461 aa20.09■□□□□ 0.81
APP-208ENST00000439274 ERVK-7P63135 1459 aa20.09■□□□□ 0.81
APP-208ENST00000439274 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.81
APP-208ENST00000439274 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
APP-208ENST00000439274 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.8
APP-208ENST00000439274 BCAR3O75815 825 aa20.07■□□□□ 0.8
APP-208ENST00000439274 MROH1Q8NDA8 1641 aa20.07■□□□□ 0.8
APP-208ENST00000439274 VWDEQ8N2E2 1590 aa20.07■□□□□ 0.8
APP-208ENST00000439274 ABCA6Q8N139 1617 aa20.07■□□□□ 0.8
APP-208ENST00000439274 HECW2Q9P2P5 1572 aa20.06■□□□□ 0.8
APP-208ENST00000439274 SLC4A3P48751 1232 aa20.06■□□□□ 0.8
APP-208ENST00000439274 KIAA1210Q9ULL0 1709 aa20.05■□□□□ 0.8
APP-208ENST00000439274 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
APP-208ENST00000439274 RICTORQ6R327 1708 aa20.04■□□□□ 0.8
APP-208ENST00000439274 FRMPD1Q5SYB0 1578 aa20.04■□□□□ 0.8
APP-208ENST00000439274 RGS3P49796 1198 aa20.04■□□□□ 0.8
APP-208ENST00000439274 NKTRP30414 1462 aaKnown RBP20.04■□□□□ 0.8
APP-208ENST00000439274 DDRGK1Q96HY6 314 aa20.03■□□□□ 0.8
APP-208ENST00000439274 C8orf34Q49A92 452 aa20.03■□□□□ 0.8
APP-208ENST00000439274 MLH3Q9UHC1 1453 aa20.03■□□□□ 0.8
APP-208ENST00000439274 MYOM2P54296 1465 aa20.01■□□□□ 0.79
APP-208ENST00000439274 FAM161AQ3B820 660 aa20.01■□□□□ 0.79
APP-208ENST00000439274 E9PSI1 815 aa20■□□□□ 0.79
APP-208ENST00000439274 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
APP-208ENST00000439274 MROH2AA6NES4 1674 aa19.99■□□□□ 0.79
APP-208ENST00000439274 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
APP-208ENST00000439274 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
APP-208ENST00000439274 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
APP-208ENST00000439274 KIF1BO60333 1816 aa19.98■□□□□ 0.79
APP-208ENST00000439274 RAPGEF3O95398 923 aa19.98■□□□□ 0.79
APP-208ENST00000439274 USP35Q9P2H5 1018 aa19.98■□□□□ 0.79
APP-208ENST00000439274 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
APP-208ENST00000439274 FAM69CQ0P6D2 419 aa19.97■□□□□ 0.79
APP-208ENST00000439274 KIF13AQ9H1H9 1805 aa19.97■□□□□ 0.79
APP-208ENST00000439274 EFCAB6Q5THR3 1501 aa19.96■□□□□ 0.79
APP-208ENST00000439274 DIP2CQ9Y2E4 1556 aa19.96■□□□□ 0.79
APP-208ENST00000439274 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
APP-208ENST00000439274 NOS1P29475 1434 aa19.96■□□□□ 0.79
APP-208ENST00000439274 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
APP-208ENST00000439274 IGHDP01880 384 aa19.95■□□□□ 0.78
APP-208ENST00000439274 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
APP-208ENST00000439274 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms