RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 INO80Q9ULG1 1556 aaPredicted RBP17.87■□□□□ 0.45
PCNX3-202ENST00000439247 ZNF518AQ6AHZ1 1483 aa17.86■□□□□ 0.45
PCNX3-202ENST00000439247 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
PCNX3-202ENST00000439247 RTEL1-TNFRSF6BF6WH68 1400 aa17.85■□□□□ 0.45
PCNX3-202ENST00000439247 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
PCNX3-202ENST00000439247 KIDINS220Q9ULH0 1771 aa17.84■□□□□ 0.45
PCNX3-202ENST00000439247 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
PCNX3-202ENST00000439247 KTN1Q86UP2 1357 aaKnown RBP17.82■□□□□ 0.44
PCNX3-202ENST00000439247 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
PCNX3-202ENST00000439247 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
PCNX3-202ENST00000439247 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
PCNX3-202ENST00000439247 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
PCNX3-202ENST00000439247 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
PCNX3-202ENST00000439247 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
PCNX3-202ENST00000439247 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
PCNX3-202ENST00000439247 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
PCNX3-202ENST00000439247 RICTORQ6R327 1708 aa17.79■□□□□ 0.44
PCNX3-202ENST00000439247 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
PCNX3-202ENST00000439247 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
PCNX3-202ENST00000439247 FRAT2O75474 233 aaPredicted RBP17.78■□□□□ 0.44
PCNX3-202ENST00000439247 COL17A1Q9UMD9 1497 aaPredicted RBP17.78■□□□□ 0.44
PCNX3-202ENST00000439247 RGS3P49796 1198 aa17.78■□□□□ 0.44
PCNX3-202ENST00000439247 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
PCNX3-202ENST00000439247 KIF3BO15066 747 aa17.77■□□□□ 0.44
PCNX3-202ENST00000439247 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.44
PCNX3-202ENST00000439247 HECW2Q9P2P5 1572 aa17.77■□□□□ 0.44
PCNX3-202ENST00000439247 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
PCNX3-202ENST00000439247 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
PCNX3-202ENST00000439247 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
PCNX3-202ENST00000439247 E9PCH4 1651 aa17.76■□□□□ 0.43
PCNX3-202ENST00000439247 ABCA6Q8N139 1617 aa17.76■□□□□ 0.43
PCNX3-202ENST00000439247 UNC13BO14795 1591 aa17.75■□□□□ 0.43
PCNX3-202ENST00000439247 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
PCNX3-202ENST00000439247 KDM5DQ9BY66 1539 aa17.75■□□□□ 0.43
PCNX3-202ENST00000439247 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
PCNX3-202ENST00000439247 PANK3Q9H999 370 aa17.74■□□□□ 0.43
PCNX3-202ENST00000439247 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
PCNX3-202ENST00000439247 A2MP01023 1474 aa17.73■□□□□ 0.43
PCNX3-202ENST00000439247 DISP3Q9P2K9 1392 aa17.72■□□□□ 0.43
PCNX3-202ENST00000439247 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
PCNX3-202ENST00000439247 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
PCNX3-202ENST00000439247 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
PCNX3-202ENST00000439247 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
PCNX3-202ENST00000439247 BLMP54132 1417 aaPredicted RBP17.68■□□□□ 0.42
PCNX3-202ENST00000439247 GGT6Q6P531 493 aa17.68■□□□□ 0.42
PCNX3-202ENST00000439247 PLEKHH1Q9ULM0 1364 aa17.68■□□□□ 0.42
PCNX3-202ENST00000439247 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
PCNX3-202ENST00000439247 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
PCNX3-202ENST00000439247 DUSP27Q5VZP5 1158 aa17.66■□□□□ 0.42
PCNX3-202ENST00000439247 DEPDC5O75140 1603 aa17.66■□□□□ 0.42
PCNX3-202ENST00000439247 TESK2Q96S53 571 aa17.65■□□□□ 0.42
PCNX3-202ENST00000439247 PLA2R1Q13018 1463 aa17.64■□□□□ 0.42
PCNX3-202ENST00000439247 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
PCNX3-202ENST00000439247 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
PCNX3-202ENST00000439247 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
PCNX3-202ENST00000439247 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
PCNX3-202ENST00000439247 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
PCNX3-202ENST00000439247 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
PCNX3-202ENST00000439247 POGKQ9P215 609 aa17.62■□□□□ 0.41
PCNX3-202ENST00000439247 SEC24BO95487 1268 aa17.61■□□□□ 0.41
PCNX3-202ENST00000439247 VWDEQ8N2E2 1590 aa17.61■□□□□ 0.41
PCNX3-202ENST00000439247 BCAR3O75815 825 aa17.61■□□□□ 0.41
PCNX3-202ENST00000439247 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
PCNX3-202ENST00000439247 ARXQ96QS3 562 aa17.6■□□□□ 0.41
PCNX3-202ENST00000439247 TRPM1Q7Z4N2 1603 aa17.59■□□□□ 0.41
PCNX3-202ENST00000439247 KANK1Q14678 1352 aa17.59■□□□□ 0.41
PCNX3-202ENST00000439247 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.41
PCNX3-202ENST00000439247 RNF17Q9BXT8 1623 aaKnown RBP17.58■□□□□ 0.41
PCNX3-202ENST00000439247 IGHDP01880 384 aa17.58■□□□□ 0.4
PCNX3-202ENST00000439247 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.4
PCNX3-202ENST00000439247 CEP152O94986 1710 aa17.58■□□□□ 0.4
PCNX3-202ENST00000439247 ATP10AO60312 1499 aa17.57■□□□□ 0.4
PCNX3-202ENST00000439247 PPP2R1AP30153 589 aa17.57■□□□□ 0.4
PCNX3-202ENST00000439247 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
PCNX3-202ENST00000439247 UBE2Q2Q8WVN8 375 aa17.57■□□□□ 0.4
PCNX3-202ENST00000439247 CCDC144AA2RUR9 1427 aa17.56■□□□□ 0.4
PCNX3-202ENST00000439247 USP19O94966 1318 aa17.56■□□□□ 0.4
PCNX3-202ENST00000439247 MLECQ14165 292 aa17.55■□□□□ 0.4
PCNX3-202ENST00000439247 TET3O43151 1660 aa17.55■□□□□ 0.4
PCNX3-202ENST00000439247 TMF1P82094 1093 aa17.54■□□□□ 0.4
PCNX3-202ENST00000439247 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
PCNX3-202ENST00000439247 ZNF521Q96K83 1311 aa17.54■□□□□ 0.4
PCNX3-202ENST00000439247 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
PCNX3-202ENST00000439247 ABCC3O15438 1527 aa17.52■□□□□ 0.4
PCNX3-202ENST00000439247 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.4
PCNX3-202ENST00000439247 CFAP65Q6ZU64 1925 aaKnown RBP17.52■□□□□ 0.4
PCNX3-202ENST00000439247 UGGT1Q9NYU2 1555 aa17.52■□□□□ 0.39
PCNX3-202ENST00000439247 EFCAB6Q5THR3 1501 aa17.52■□□□□ 0.39
PCNX3-202ENST00000439247 APAF1O14727 1248 aa17.52■□□□□ 0.39
PCNX3-202ENST00000439247 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.39
PCNX3-202ENST00000439247 NPATQ14207 1427 aa17.51■□□□□ 0.39
PCNX3-202ENST00000439247 FAM43AQ8N2R8 423 aa17.51■□□□□ 0.39
PCNX3-202ENST00000439247 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
PCNX3-202ENST00000439247 RRAGDQ9NQL2 400 aaPredicted RBP17.5■□□□□ 0.39
PCNX3-202ENST00000439247 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
PCNX3-202ENST00000439247 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
PCNX3-202ENST00000439247 SPRYD3Q8NCJ5 442 aa17.49■□□□□ 0.39
PCNX3-202ENST00000439247 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
PCNX3-202ENST00000439247 PTPRTO14522 1441 aa17.48■□□□□ 0.39
PCNX3-202ENST00000439247 SPHKAPQ2M3C7 1700 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms