RNA–Protein interactions for RNA: ENST00000439181.5

PBRM1-214, Transcript of polybromo 1, humanhuman

TSL 4

Gene PBRM1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-214ENST00000439181 SPNS2Q8IVW8 549 aa11.06□□□□□ -0.64
PBRM1-214ENST00000439181 PLXNC1O60486 1568 aa11.06□□□□□ -0.64
PBRM1-214ENST00000439181 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
PBRM1-214ENST00000439181 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
PBRM1-214ENST00000439181 NPATQ14207 1427 aa11.04□□□□□ -0.64
PBRM1-214ENST00000439181 A2MP01023 1474 aa11.04□□□□□ -0.64
PBRM1-214ENST00000439181 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-214ENST00000439181 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
PBRM1-214ENST00000439181 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
PBRM1-214ENST00000439181 FAM135AQ9P2D6 1515 aa11.02□□□□□ -0.65
PBRM1-214ENST00000439181 CCDC141Q6ZP82 1450 aa11.01□□□□□ -0.65
PBRM1-214ENST00000439181 DISP3Q9P2K9 1392 aa11.01□□□□□ -0.65
PBRM1-214ENST00000439181 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
PBRM1-214ENST00000439181 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
PBRM1-214ENST00000439181 ZNF142P52746 1687 aaPredicted RBP11□□□□□ -0.65
PBRM1-214ENST00000439181 CLTCQ00610 1675 aaKnown RBP11□□□□□ -0.65
PBRM1-214ENST00000439181 PTPRTO14522 1441 aa11□□□□□ -0.65
PBRM1-214ENST00000439181 NCOA2Q15596 1464 aa11□□□□□ -0.65
PBRM1-214ENST00000439181 STRCQ7RTU9 1775 aa10.99□□□□□ -0.65
PBRM1-214ENST00000439181 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
PBRM1-214ENST00000439181 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-214ENST00000439181 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
PBRM1-214ENST00000439181 VPS8Q8N3P4 1428 aa10.99□□□□□ -0.65
PBRM1-214ENST00000439181 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
PBRM1-214ENST00000439181 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
PBRM1-214ENST00000439181 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
PBRM1-214ENST00000439181 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
PBRM1-214ENST00000439181 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-214ENST00000439181 NCOA1Q15788 1441 aa10.98□□□□□ -0.65
PBRM1-214ENST00000439181 MBD5Q9P267 1494 aa10.98□□□□□ -0.65
PBRM1-214ENST00000439181 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
PBRM1-214ENST00000439181 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
PBRM1-214ENST00000439181 CEP170BQ9Y4F5 1589 aaPredicted RBP10.96□□□□□ -0.65
PBRM1-214ENST00000439181 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
PBRM1-214ENST00000439181 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
PBRM1-214ENST00000439181 EMP3P54852 163 aa10.96□□□□□ -0.65
PBRM1-214ENST00000439181 GSE1Q14687 1217 aa10.96□□□□□ -0.65
PBRM1-214ENST00000439181 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
PBRM1-214ENST00000439181 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
PBRM1-214ENST00000439181 KDM5DQ9BY66 1539 aa10.95□□□□□ -0.66
PBRM1-214ENST00000439181 IQSEC2Q5JU85 1478 aa10.95□□□□□ -0.66
PBRM1-214ENST00000439181 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
PBRM1-214ENST00000439181 DHX29Q7Z478 1369 aaKnown RBP10.94□□□□□ -0.66
PBRM1-214ENST00000439181 GGT6Q6P531 493 aa10.94□□□□□ -0.66
PBRM1-214ENST00000439181 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
PBRM1-214ENST00000439181 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
PBRM1-214ENST00000439181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■□□□ 12
PBRM1-214ENST00000439181 ZC3H13Q5T200 1668 aaKnown RBP10.92□□□□□ -0.66
PBRM1-214ENST00000439181 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
PBRM1-214ENST00000439181 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
PBRM1-214ENST00000439181 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
PBRM1-214ENST00000439181 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
PBRM1-214ENST00000439181 PKD2Q13563 968 aa10.91□□□□□ -0.66
PBRM1-214ENST00000439181 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
PBRM1-214ENST00000439181 PZPP20742 1482 aa10.91□□□□□ -0.66
PBRM1-214ENST00000439181 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
PBRM1-214ENST00000439181 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
PBRM1-214ENST00000439181 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
PBRM1-214ENST00000439181 RNF17Q9BXT8 1623 aaKnown RBP10.89□□□□□ -0.67
PBRM1-214ENST00000439181 PSEN1P49768 467 aa10.89□□□□□ -0.67
PBRM1-214ENST00000439181 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
PBRM1-214ENST00000439181 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
PBRM1-214ENST00000439181 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
PBRM1-214ENST00000439181 KIF3BO15066 747 aa10.88□□□□□ -0.67
PBRM1-214ENST00000439181 POLR1AO95602 1720 aaPredicted RBP10.88□□□□□ -0.67
PBRM1-214ENST00000439181 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
PBRM1-214ENST00000439181 TNRQ92752 1358 aa10.88□□□□□ -0.67
PBRM1-214ENST00000439181 NLRP1Q9C000 1473 aa10.87□□□□□ -0.67
PBRM1-214ENST00000439181 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
PBRM1-214ENST00000439181 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
PBRM1-214ENST00000439181 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
PBRM1-214ENST00000439181 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
PBRM1-214ENST00000439181 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
PBRM1-214ENST00000439181 DUOX2Q9NRD8 1548 aa10.85□□□□□ -0.67
PBRM1-214ENST00000439181 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-214ENST00000439181 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
PBRM1-214ENST00000439181 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
PBRM1-214ENST00000439181 ABCC3O15438 1527 aa10.84□□□□□ -0.67
PBRM1-214ENST00000439181 UGGT1Q9NYU2 1555 aa10.83□□□□□ -0.68
PBRM1-214ENST00000439181 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 G3V3G9 751 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 POTEBQ6S5H4 581 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 PTPN23Q9H3S7 1636 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 CPS1P31327 1500 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 PRDM15P57071 1507 aaPredicted RBP10.82□□□□□ -0.68
PBRM1-214ENST00000439181 ERBINQ96RT1 1412 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 NCKAP5LQ9HCH0 1330 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
PBRM1-214ENST00000439181 DEPDC5O75140 1603 aa10.81□□□□□ -0.68
PBRM1-214ENST00000439181 PDAP1Q13442 181 aaKnown RBP10.81□□□□□ -0.68
PBRM1-214ENST00000439181 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
PBRM1-214ENST00000439181 KIF15Q9NS87 1388 aa10.8□□□□□ -0.68
PBRM1-214ENST00000439181 HRCP23327 699 aa10.8□□□□□ -0.68
PBRM1-214ENST00000439181 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-214ENST00000439181 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-214ENST00000439181 ERVK-7P63135 1459 aa10.8□□□□□ -0.68
PBRM1-214ENST00000439181 MROH1Q8NDA8 1641 aa10.8□□□□□ -0.68
PBRM1-214ENST00000439181 CEP152O94986 1710 aa10.79□□□□□ -0.68
PBRM1-214ENST00000439181 LOC105371045A0A1W2PR82 267 aa10.79□□□□□ -0.68
PBRM1-214ENST00000439181 FGD6Q6ZV73 1430 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms