RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 UPF1Q92900 1129 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00415-201ENST00000439079 ADCY10Q96PN6 1610 aa7.07□□□□□ -1.28
LINC00415-201ENST00000439079 ADGRL1O94910 1474 aa7.06□□□□□ -1.28
LINC00415-201ENST00000439079 CANXP27824 592 aaKnown RBP7.06□□□□□ -1.28
LINC00415-201ENST00000439079 DCBLD2Q96PD2 775 aa7.06□□□□□ -1.28
LINC00415-201ENST00000439079 COLQQ9Y215 455 aaPredicted RBP7.06□□□□□ -1.28
LINC00415-201ENST00000439079 ABCA10Q8WWZ4 1543 aa7.06□□□□□ -1.28
LINC00415-201ENST00000439079 MAP2K5Q13163 448 aa7.05□□□□□ -1.28
LINC00415-201ENST00000439079 FOXD4L5Q5VV16 416 aaPredicted RBP7.05□□□□□ -1.28
LINC00415-201ENST00000439079 FOXD4L4Q8WXT5 416 aaPredicted RBP7.05□□□□□ -1.28
LINC00415-201ENST00000439079 SLC39A7Q92504 469 aa7.05□□□□□ -1.28
LINC00415-201ENST00000439079 CHMP4AQ9BY43 222 aa7.05□□□□□ -1.28
LINC00415-201ENST00000439079 IRF6O14896 467 aa7.04□□□□□ -1.28
LINC00415-201ENST00000439079 GNPATO15228 680 aa7.04□□□□□ -1.28
LINC00415-201ENST00000439079 PPP1R15AO75807 674 aaPredicted RBP7.04□□□□□ -1.28
LINC00415-201ENST00000439079 FCHSD2O94868 740 aa7.04□□□□□ -1.28
LINC00415-201ENST00000439079 DDX12PQ92771 950 aa7.04□□□□□ -1.28
LINC00415-201ENST00000439079 PRG4Q92954 1404 aaPredicted RBP7.03□□□□□ -1.28
LINC00415-201ENST00000439079 EVI5O60447 810 aa7.03□□□□□ -1.28
LINC00415-201ENST00000439079 C7P10643 843 aa7.03□□□□□ -1.28
LINC00415-201ENST00000439079 HIC1Q14526 733 aa7.03□□□□□ -1.28
LINC00415-201ENST00000439079 PTCD2Q8WV60 388 aaKnown RBP7.03□□□□□ -1.28
LINC00415-201ENST00000439079 USP35Q9P2H5 1018 aa7.03□□□□□ -1.28
LINC00415-201ENST00000439079 CCDC102AQ96A19 550 aa7.02□□□□□ -1.29
LINC00415-201ENST00000439079 CLUAP1Q96AJ1 413 aa7.02□□□□□ -1.29
LINC00415-201ENST00000439079 COL17A1Q9UMD9 1497 aaPredicted RBP7.01□□□□□ -1.29
LINC00415-201ENST00000439079 SLC34A2O95436 690 aa7.01□□□□□ -1.29
LINC00415-201ENST00000439079 PROSER2Q86WR7 435 aaPredicted RBP7.01□□□□□ -1.29
LINC00415-201ENST00000439079 RETREG2Q8NC44 543 aa7.01□□□□□ -1.29
LINC00415-201ENST00000439079 FAM117AQ9C073 453 aa7.01□□□□□ -1.29
LINC00415-201ENST00000439079 KCNA1Q09470 495 aa7□□□□□ -1.29
LINC00415-201ENST00000439079 AMHR2Q16671 573 aa7□□□□□ -1.29
LINC00415-201ENST00000439079 C3orf67Q6ZVT6 689 aa7□□□□□ -1.29
LINC00415-201ENST00000439079 ANO8Q9HCE9 1232 aaPredicted RBP7□□□□□ -1.29
LINC00415-201ENST00000439079 ACIN1Q9UKV3 1341 aaKnown RBP7□□□□□ -1.29
LINC00415-201ENST00000439079 POTEFA5A3E0 1075 aa6.99□□□□□ -1.29
LINC00415-201ENST00000439079 PTGDRQ13258 359 aa6.99□□□□□ -1.29
LINC00415-201ENST00000439079 FBXO41Q8TF61 875 aa6.99□□□□□ -1.29
LINC00415-201ENST00000439079 RUSC2Q8N2Y8 1516 aa6.99□□□□□ -1.29
LINC00415-201ENST00000439079 FHAD1B1AJZ9 1412 aa6.99□□□□□ -1.29
LINC00415-201ENST00000439079 FECHP22830 423 aa6.98□□□□□ -1.29
LINC00415-201ENST00000439079 JPH4Q96JJ6 628 aa6.98□□□□□ -1.29
LINC00415-201ENST00000439079 METRNQ9UJH8 293 aa6.98□□□□□ -1.29
LINC00415-201ENST00000439079 PLEKHG3A1L390 1219 aa6.97□□□□□ -1.29
LINC00415-201ENST00000439079 PRIM1P49642 420 aaKnown RBP6.97□□□□□ -1.29
LINC00415-201ENST00000439079 ZNF428Q96B54 188 aa6.97□□□□□ -1.29
LINC00415-201ENST00000439079 ZNF777Q9ULD5 760 aaPredicted RBP6.97□□□□□ -1.29
LINC00415-201ENST00000439079 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
LINC00415-201ENST00000439079 PARP9Q8IXQ6 854 aa6.96□□□□□ -1.3
LINC00415-201ENST00000439079 PCMTD1Q96MG8 357 aaPredicted RBP6.96□□□□□ -1.3
LINC00415-201ENST00000439079 EPAS1Q99814 870 aa6.96□□□□□ -1.3
LINC00415-201ENST00000439079 PHF14O94880 888 aa6.95□□□□□ -1.3
LINC00415-201ENST00000439079 IRF5Q13568 498 aa6.95□□□□□ -1.3
LINC00415-201ENST00000439079 MCM6Q14566 821 aa6.95□□□□□ -1.3
LINC00415-201ENST00000439079 ERICH3Q5RHP9 1530 aa6.95□□□□□ -1.3
LINC00415-201ENST00000439079 GLI2P10070 1586 aa6.95□□□□□ -1.3
LINC00415-201ENST00000439079 BRD1O95696 1058 aa6.94□□□□□ -1.3
LINC00415-201ENST00000439079 EN1Q05925 392 aaPredicted RBP6.94□□□□□ -1.3
LINC00415-201ENST00000439079 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
LINC00415-201ENST00000439079 FNBP4Q8N3X1 1017 aaPredicted RBP6.94□□□□□ -1.3
LINC00415-201ENST00000439079 BIVM-ERCC5R4GMW8 1640 aa6.94□□□□□ -1.3
LINC00415-201ENST00000439079 CUL7Q14999 1698 aa6.93□□□□□ -1.3
LINC00415-201ENST00000439079 TTLL12Q14166 644 aaPredicted RBP6.93□□□□□ -1.3
LINC00415-201ENST00000439079 CCDC125Q86Z20 511 aa6.93□□□□□ -1.3
LINC00415-201ENST00000439079 NPDC1Q9NQX5 325 aaPredicted RBP6.93□□□□□ -1.3
LINC00415-201ENST00000439079 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.93□□□□□ -1.3
LINC00415-201ENST00000439079 MYT1LQ9UL68 1186 aa6.93□□□□□ -1.3
LINC00415-201ENST00000439079 MAP3K4Q9Y6R4 1608 aa6.93□□□□□ -1.3
LINC00415-201ENST00000439079 MAP3K7O43318 606 aa6.92□□□□□ -1.3
LINC00415-201ENST00000439079 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
LINC00415-201ENST00000439079 ILDR2Q71H61 639 aa6.92□□□□□ -1.3
LINC00415-201ENST00000439079 PLSCR2Q9NRY7 297 aa6.92□□□□□ -1.3
LINC00415-201ENST00000439079 LMTK3Q96Q04 1460 aa6.92□□□□□ -1.3
LINC00415-201ENST00000439079 TOP2BQ02880 1626 aa6.91□□□□□ -1.3
LINC00415-201ENST00000439079 POTEIP0CG38 1075 aa6.91□□□□□ -1.3
LINC00415-201ENST00000439079 TYW1BQ6NUM6 668 aa6.91□□□□□ -1.3
LINC00415-201ENST00000439079 SLAIN1Q8ND83 568 aa6.91□□□□□ -1.3
LINC00415-201ENST00000439079 PCDHGA4Q9Y5G9 962 aa6.91□□□□□ -1.3
LINC00415-201ENST00000439079 PCDHGA10Q9Y5H3 936 aa6.91□□□□□ -1.3
LINC00415-201ENST00000439079 WRNQ14191 1432 aaPredicted RBP eCLIP6.91□□□□□ -1.3
LINC00415-201ENST00000439079 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
LINC00415-201ENST00000439079 CDHR5Q9HBB8 845 aa6.9□□□□□ -1.3
LINC00415-201ENST00000439079 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
LINC00415-201ENST00000439079 ASXL2Q76L83 1435 aa6.9□□□□□ -1.31
LINC00415-201ENST00000439079 ABCC2Q92887 1545 aa6.9□□□□□ -1.31
LINC00415-201ENST00000439079 RBM33Q96EV2 1170 aaKnown RBP6.89□□□□□ -1.31
LINC00415-201ENST00000439079 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
LINC00415-201ENST00000439079 KIF21BO75037 1637 aa6.89□□□□□ -1.31
LINC00415-201ENST00000439079 CLCN1P35523 988 aa6.88□□□□□ -1.31
LINC00415-201ENST00000439079 EPRSP07814 1512 aaKnown RBP6.87□□□□□ -1.31
LINC00415-201ENST00000439079 PLB1Q6P1J6 1458 aa6.87□□□□□ -1.31
LINC00415-201ENST00000439079 SOCS7O14512 581 aa6.87□□□□□ -1.31
LINC00415-201ENST00000439079 MS4A1P11836 297 aa6.87□□□□□ -1.31
LINC00415-201ENST00000439079 TSR1Q2NL82 804 aaKnown RBP6.87□□□□□ -1.31
LINC00415-201ENST00000439079 POTEHQ6S545 545 aa6.87□□□□□ -1.31
LINC00415-201ENST00000439079 CERKQ8TCT0 537 aa6.87□□□□□ -1.31
LINC00415-201ENST00000439079 TMUB1Q9BVT8 246 aa6.87□□□□□ -1.31
LINC00415-201ENST00000439079 REPIN1Q9BWE0 567 aaKnown RBP6.87□□□□□ -1.31
LINC00415-201ENST00000439079 KIAA0586Q9BVV6 1533 aa6.86□□□□□ -1.31
LINC00415-201ENST00000439079 NCLP19338 710 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms