RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ZNF772Q68DY9 489 aaPredicted RBP17.97■□□□□ 0.47
CSTF3-203ENST00000438862 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
CSTF3-203ENST00000438862 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
CSTF3-203ENST00000438862 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
CSTF3-203ENST00000438862 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
CSTF3-203ENST00000438862 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
CSTF3-203ENST00000438862 TMEM2Q9UHN6 1383 aa17.93■□□□□ 0.46
CSTF3-203ENST00000438862 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
CSTF3-203ENST00000438862 MSH6P52701 1360 aa17.92■□□□□ 0.46
CSTF3-203ENST00000438862 ARHGAP31Q2M1Z3 1444 aa17.92■□□□□ 0.46
CSTF3-203ENST00000438862 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
CSTF3-203ENST00000438862 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
CSTF3-203ENST00000438862 PRDM15P57071 1507 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-203ENST00000438862 CEP152O94986 1710 aa17.91■□□□□ 0.46
CSTF3-203ENST00000438862 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
CSTF3-203ENST00000438862 RBM33Q96EV2 1170 aaKnown RBP17.9■□□□□ 0.46
CSTF3-203ENST00000438862 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
CSTF3-203ENST00000438862 NKTRP30414 1462 aaKnown RBP17.89■□□□□ 0.45
CSTF3-203ENST00000438862 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
CSTF3-203ENST00000438862 RXRBP28702 533 aa17.89■□□□□ 0.45
CSTF3-203ENST00000438862 SLC26A8Q96RN1 970 aa17.89■□□□□ 0.45
CSTF3-203ENST00000438862 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
CSTF3-203ENST00000438862 TET3O43151 1660 aa17.88■□□□□ 0.45
CSTF3-203ENST00000438862 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
CSTF3-203ENST00000438862 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
CSTF3-203ENST00000438862 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
CSTF3-203ENST00000438862 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
CSTF3-203ENST00000438862 LRP6O75581 1613 aa17.84■□□□□ 0.45
CSTF3-203ENST00000438862 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
CSTF3-203ENST00000438862 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
CSTF3-203ENST00000438862 IDI1Q13907 227 aa17.83■□□□□ 0.44
CSTF3-203ENST00000438862 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
CSTF3-203ENST00000438862 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
CSTF3-203ENST00000438862 BCANQ96GW7 911 aa17.81■□□□□ 0.44
CSTF3-203ENST00000438862 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
CSTF3-203ENST00000438862 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
CSTF3-203ENST00000438862 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
CSTF3-203ENST00000438862 KANK1Q14678 1352 aa17.78■□□□□ 0.44
CSTF3-203ENST00000438862 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
CSTF3-203ENST00000438862 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
CSTF3-203ENST00000438862 AHDC1Q5TGY3 1603 aaPredicted RBP17.76■□□□□ 0.43
CSTF3-203ENST00000438862 ERBINQ96RT1 1412 aa17.75■□□□□ 0.43
CSTF3-203ENST00000438862 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
CSTF3-203ENST00000438862 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
CSTF3-203ENST00000438862 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
CSTF3-203ENST00000438862 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
CSTF3-203ENST00000438862 MYOM3Q5VTT5 1437 aa17.73■□□□□ 0.43
CSTF3-203ENST00000438862 ATF3P18847 181 aa17.73■□□□□ 0.43
CSTF3-203ENST00000438862 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
CSTF3-203ENST00000438862 AFF2P51816 1311 aa17.72■□□□□ 0.43
CSTF3-203ENST00000438862 KIF15Q9NS87 1388 aa17.72■□□□□ 0.43
CSTF3-203ENST00000438862 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
CSTF3-203ENST00000438862 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
CSTF3-203ENST00000438862 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
CSTF3-203ENST00000438862 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
CSTF3-203ENST00000438862 PLEKHG1Q9ULL1 1385 aa17.71■□□□□ 0.43
CSTF3-203ENST00000438862 RBM6P78332 1123 aaKnown RBP17.71■□□□□ 0.43
CSTF3-203ENST00000438862 ADGRB3O60242 1522 aa17.71■□□□□ 0.43
CSTF3-203ENST00000438862 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
CSTF3-203ENST00000438862 RRP7BPQ9NSQ0 103 aa17.7■□□□□ 0.42
CSTF3-203ENST00000438862 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
CSTF3-203ENST00000438862 NOS1P29475 1434 aa17.69■□□□□ 0.42
CSTF3-203ENST00000438862 PPP1R15AO75807 674 aaPredicted RBP17.68■□□□□ 0.42
CSTF3-203ENST00000438862 NUTM2DQ5VT03 806 aaPredicted RBP17.68■□□□□ 0.42
CSTF3-203ENST00000438862 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
CSTF3-203ENST00000438862 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.68■□□□□ 0.42
CSTF3-203ENST00000438862 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
CSTF3-203ENST00000438862 ZRANB1Q9UGI0 708 aa17.67■□□□□ 0.42
CSTF3-203ENST00000438862 PITPNM1O00562 1244 aa17.66■□□□□ 0.42
CSTF3-203ENST00000438862 RGS12O14924 1447 aa17.65■□□□□ 0.42
CSTF3-203ENST00000438862 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
CSTF3-203ENST00000438862 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
CSTF3-203ENST00000438862 NGLY1Q96IV0 654 aa17.65■□□□□ 0.42
CSTF3-203ENST00000438862 LRRC59Q96AG4 307 aaKnown RBP17.64■□□□□ 0.41
CSTF3-203ENST00000438862 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
CSTF3-203ENST00000438862 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
CSTF3-203ENST00000438862 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
CSTF3-203ENST00000438862 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
CSTF3-203ENST00000438862 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
CSTF3-203ENST00000438862 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
CSTF3-203ENST00000438862 ABCC5O15440 1437 aa17.61■□□□□ 0.41
CSTF3-203ENST00000438862 CROCC2H7BZ55 1655 aa17.59■□□□□ 0.41
CSTF3-203ENST00000438862 RPRD2Q5VT52 1461 aaKnown RBP17.58■□□□□ 0.41
CSTF3-203ENST00000438862 DCCP43146 1447 aa17.58■□□□□ 0.41
CSTF3-203ENST00000438862 CCDC125Q86Z20 511 aa17.58■□□□□ 0.4
CSTF3-203ENST00000438862 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.4
CSTF3-203ENST00000438862 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
CSTF3-203ENST00000438862 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
CSTF3-203ENST00000438862 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
CSTF3-203ENST00000438862 AMOTL2Q9Y2J4 779 aa17.56■□□□□ 0.4
CSTF3-203ENST00000438862 TMEM131LA2VDJ0 1609 aa17.55■□□□□ 0.4
CSTF3-203ENST00000438862 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
CSTF3-203ENST00000438862 KANK4Q5T7N3 995 aaPredicted RBP17.55■□□□□ 0.4
CSTF3-203ENST00000438862 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
CSTF3-203ENST00000438862 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
CSTF3-203ENST00000438862 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
CSTF3-203ENST00000438862 DAPK1P53355 1430 aa17.54■□□□□ 0.4
CSTF3-203ENST00000438862 PNPLA6Q8IY17 1366 aa17.53■□□□□ 0.4
CSTF3-203ENST00000438862 TRPC5Q9UL62 973 aaPredicted RBP17.53■□□□□ 0.4
CSTF3-203ENST00000438862 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms