RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 BRD4O60885 1362 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC9-202ENST00000438773 DNMT1P26358 1616 aaKnown RBP14.89□□□□□ -0.03
TRAPPC9-202ENST00000438773 PRAM1Q96QH2 718 aa14.88□□□□□ -0.03
TRAPPC9-202ENST00000438773 RPGRIP1LQ68CZ1 1315 aa14.88□□□□□ -0.03
TRAPPC9-202ENST00000438773 ADGRF5Q8IZF2 1346 aa14.87□□□□□ -0.03
TRAPPC9-202ENST00000438773 IDI1Q13907 227 aa14.87□□□□□ -0.03
TRAPPC9-202ENST00000438773 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
TRAPPC9-202ENST00000438773 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
TRAPPC9-202ENST00000438773 MS4A1P11836 297 aa14.86□□□□□ -0.03
TRAPPC9-202ENST00000438773 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
TRAPPC9-202ENST00000438773 ADAMTS8Q9UP79 889 aa14.86□□□□□ -0.03
TRAPPC9-202ENST00000438773 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC9-202ENST00000438773 COG3Q96JB2 828 aa14.85□□□□□ -0.03
TRAPPC9-202ENST00000438773 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
TRAPPC9-202ENST00000438773 TXNDC2Q86VQ3 553 aa14.85□□□□□ -0.03
TRAPPC9-202ENST00000438773 PNISRQ8TF01 805 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-202ENST00000438773 PZPP20742 1482 aa14.84□□□□□ -0.03
TRAPPC9-202ENST00000438773 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-202ENST00000438773 FAM135AQ9P2D6 1515 aa14.83□□□□□ -0.03
TRAPPC9-202ENST00000438773 ABCA8O94911 1581 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 PLIN1O60240 522 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 MTHFSP49914 203 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 ADGRL2O95490 1459 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 AMPHP49418 695 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 IPO9Q96P70 1041 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 SMG6Q86US8 1419 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-202ENST00000438773 HSP90AA1P07900 732 aaKnown RBP14.81□□□□□ -0.04
TRAPPC9-202ENST00000438773 ZNF518AQ6AHZ1 1483 aa14.81□□□□□ -0.04
TRAPPC9-202ENST00000438773 CALD1Q05682 793 aaKnown RBP14.81□□□□□ -0.04
TRAPPC9-202ENST00000438773 TEX14Q8IWB6 1497 aa14.81□□□□□ -0.04
TRAPPC9-202ENST00000438773 GCC2Q8IWJ2 1684 aa14.81□□□□□ -0.04
TRAPPC9-202ENST00000438773 A2MP01023 1474 aa14.81□□□□□ -0.04
TRAPPC9-202ENST00000438773 POGZQ7Z3K3 1410 aa14.8□□□□□ -0.04
TRAPPC9-202ENST00000438773 CLUAP1Q96AJ1 413 aa14.8□□□□□ -0.04
TRAPPC9-202ENST00000438773 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
TRAPPC9-202ENST00000438773 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
TRAPPC9-202ENST00000438773 E9PSI1 815 aa14.79□□□□□ -0.04
TRAPPC9-202ENST00000438773 LTV1Q96GA3 475 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC9-202ENST00000438773 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
TRAPPC9-202ENST00000438773 SMC4Q9NTJ3 1288 aa14.79□□□□□ -0.04
TRAPPC9-202ENST00000438773 IPO8O15397 1037 aaKnown RBP14.78□□□□□ -0.04
TRAPPC9-202ENST00000438773 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
TRAPPC9-202ENST00000438773 BCL2L13Q9BXK5 485 aa14.78□□□□□ -0.04
TRAPPC9-202ENST00000438773 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.04
TRAPPC9-202ENST00000438773 CDK19Q9BWU1 502 aa14.77□□□□□ -0.04
TRAPPC9-202ENST00000438773 CHMP4BQ9H444 224 aaKnown RBP14.77□□□□□ -0.04
TRAPPC9-202ENST00000438773 NOS1P29475 1434 aa14.77□□□□□ -0.04
TRAPPC9-202ENST00000438773 CABP1Q9NZU7 370 aa14.77□□□□□ -0.05
TRAPPC9-202ENST00000438773 RTEL1-TNFRSF6BF6WH68 1400 aa14.76□□□□□ -0.05
TRAPPC9-202ENST00000438773 EXOC6Q8TAG9 804 aa14.76□□□□□ -0.05
TRAPPC9-202ENST00000438773 SKAP1Q86WV1 359 aa14.76□□□□□ -0.05
TRAPPC9-202ENST00000438773 RUNDC1Q96C34 613 aa14.76□□□□□ -0.05
TRAPPC9-202ENST00000438773 THEMISQ8N1K5 641 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC9-202ENST00000438773 NGEFQ8N5V2 710 aa14.75□□□□□ -0.05
TRAPPC9-202ENST00000438773 MBD5Q9P267 1494 aa14.75□□□□□ -0.05
TRAPPC9-202ENST00000438773 PRAG1Q86YV5 1406 aa14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 CHD1O14646 1710 aa14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 RALGAPBQ86X10 1494 aa14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 LMOD3Q0VAK6 560 aa14.74□□□□□ -0.05
TRAPPC9-202ENST00000438773 C14orf93Q9H972 538 aaKnown RBP14.73□□□□□ -0.05
TRAPPC9-202ENST00000438773 ELL2O00472 640 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-202ENST00000438773 DISP3Q9P2K9 1392 aa14.73□□□□□ -0.05
TRAPPC9-202ENST00000438773 SCAF11Q99590 1463 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 CEBPAP49715 358 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 IL27Q8NEV9 243 aa14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 RIPK4P57078 832 aa14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 TCP11L2Q8N4U5 519 aa14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
TRAPPC9-202ENST00000438773 HMOX1P09601 288 aa14.71□□□□□ -0.05
TRAPPC9-202ENST00000438773 SPRYD3Q8NCJ5 442 aa14.71□□□□□ -0.05
TRAPPC9-202ENST00000438773 BCORL1Q5H9F3 1711 aa14.71□□□□□ -0.05
TRAPPC9-202ENST00000438773 ERCC6L2Q5T890 1561 aa14.71□□□□□ -0.05
TRAPPC9-202ENST00000438773 CRBNQ96SW2 442 aa14.71□□□□□ -0.05
TRAPPC9-202ENST00000438773 DDRGK1Q96HY6 314 aa14.7□□□□□ -0.06
TRAPPC9-202ENST00000438773 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC9-202ENST00000438773 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
TRAPPC9-202ENST00000438773 PMFBP1Q8TBY8 1022 aa14.69□□□□□ -0.06
TRAPPC9-202ENST00000438773 UHRF1BP1LA0JNW5 1464 aa14.69□□□□□ -0.06
TRAPPC9-202ENST00000438773 ATAD2Q6PL18 1390 aa14.69□□□□□ -0.06
TRAPPC9-202ENST00000438773 SLC4A3P48751 1232 aa14.69□□□□□ -0.06
TRAPPC9-202ENST00000438773 NSD3Q9BZ95 1437 aa14.68□□□□□ -0.06
TRAPPC9-202ENST00000438773 PSME1Q06323 249 aa14.68□□□□□ -0.06
TRAPPC9-202ENST00000438773 TCERG1O14776 1098 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-202ENST00000438773 TESK2Q96S53 571 aa14.68□□□□□ -0.06
TRAPPC9-202ENST00000438773 RWDD1Q9H446 243 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-202ENST00000438773 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
TRAPPC9-202ENST00000438773 CCDC9Q9Y3X0 531 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-202ENST00000438773 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
TRAPPC9-202ENST00000438773 COG6Q9Y2V7 657 aa14.67□□□□□ -0.06
TRAPPC9-202ENST00000438773 NLRP6P59044 892 aa14.66□□□□□ -0.06
TRAPPC9-202ENST00000438773 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
TRAPPC9-202ENST00000438773 PDE4AP27815 886 aa14.66□□□□□ -0.06
TRAPPC9-202ENST00000438773 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
TRAPPC9-202ENST00000438773 BECN1Q14457 450 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms