RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SMARCE1Q969G3 411 aa13.96□□□□□ -0.18
PTCH1-209ENST00000437951 CCDC73Q6ZRK6 1079 aa13.95□□□□□ -0.18
PTCH1-209ENST00000437951 BICD2Q8TD16 824 aa13.95□□□□□ -0.18
PTCH1-209ENST00000437951 FAM107BQ9H098 131 aa13.95□□□□□ -0.18
PTCH1-209ENST00000437951 IQCEQ6IPM2 695 aa13.95□□□□□ -0.18
PTCH1-209ENST00000437951 GIMAP7Q8NHV1 300 aa13.94□□□□□ -0.18
PTCH1-209ENST00000437951 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-209ENST00000437951 U2AF1L5P0DN76 240 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-209ENST00000437951 U2AF1Q01081 240 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCH1-209ENST00000437951 SRPK2P78362 688 aaKnown RBP13.94□□□□□ -0.18
PTCH1-209ENST00000437951 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
PTCH1-209ENST00000437951 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
PTCH1-209ENST00000437951 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-209ENST00000437951 ODF2Q5BJF6 829 aa13.93□□□□□ -0.18
PTCH1-209ENST00000437951 NAP1L1P55209 391 aaKnown RBP13.92□□□□□ -0.18
PTCH1-209ENST00000437951 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
PTCH1-209ENST00000437951 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
PTCH1-209ENST00000437951 MCTP1Q6DN14 999 aa13.92□□□□□ -0.18
PTCH1-209ENST00000437951 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
PTCH1-209ENST00000437951 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-209ENST00000437951 AXDND1Q5T1B0 1012 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-209ENST00000437951 DDX11Q96FC9 970 aa13.92□□□□□ -0.18
PTCH1-209ENST00000437951 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-209ENST00000437951 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-209ENST00000437951 E9PSI1 815 aa13.91□□□□□ -0.18
PTCH1-209ENST00000437951 CT47A1Q5JQC4 288 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-209ENST00000437951 PLCD4Q9BRC7 762 aa13.91□□□□□ -0.18
PTCH1-209ENST00000437951 PRKCSHP14314 528 aaPredicted RBP13.91□□□□□ -0.18
PTCH1-209ENST00000437951 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
PTCH1-209ENST00000437951 NFKBIBQ15653 356 aa13.9□□□□□ -0.18
PTCH1-209ENST00000437951 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
PTCH1-209ENST00000437951 INTS3Q68E01 1043 aaKnown RBP13.9□□□□□ -0.18
PTCH1-209ENST00000437951 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
PTCH1-209ENST00000437951 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.9□□□□□ -0.18
PTCH1-209ENST00000437951 HSP90AB2PQ58FF8 381 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 VPS53Q5VIR6 699 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 TSPY26PQ9H489 355 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 AMOTL1Q8IY63 956 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
PTCH1-209ENST00000437951 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
PTCH1-209ENST00000437951 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
PTCH1-209ENST00000437951 MCM2P49736 904 aa13.88□□□□□ -0.19
PTCH1-209ENST00000437951 EZRP15311 586 aaKnown RBP13.88□□□□□ -0.19
PTCH1-209ENST00000437951 CSB-PGBD3P0DP91 1061 aa13.87□□□□□ -0.19
PTCH1-209ENST00000437951 EPS15P42566 896 aa13.87□□□□□ -0.19
PTCH1-209ENST00000437951 SAFBQ15424 915 aaKnown RBP eCLIP13.87□□□□□ -0.19
PTCH1-209ENST00000437951 ANKRD45Q5TZF3 282 aa13.87□□□□□ -0.19
PTCH1-209ENST00000437951 CPLX1O14810 134 aa13.87□□□□□ -0.19
PTCH1-209ENST00000437951 FILIP1LQ4L180 1135 aa13.87□□□□□ -0.19
PTCH1-209ENST00000437951 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
PTCH1-209ENST00000437951 ZNF330Q9Y3S2 320 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-209ENST00000437951 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
PTCH1-209ENST00000437951 CHMP3Q9Y3E7 222 aa13.86□□□□□ -0.19
PTCH1-209ENST00000437951 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-209ENST00000437951 CCDC112Q8NEF3 446 aa13.86□□□□□ -0.19
PTCH1-209ENST00000437951 ANO8Q9HCE9 1232 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-209ENST00000437951 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
PTCH1-209ENST00000437951 KIF2AO00139 706 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-209ENST00000437951 SOX12O15370 315 aa13.85□□□□□ -0.19
PTCH1-209ENST00000437951 TOMM22Q9NS69 142 aa13.85□□□□□ -0.19
PTCH1-209ENST00000437951 TRAK2O60296 914 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 MCM3P25205 808 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 SEPT7Q16181 437 aaKnown RBP13.84□□□□□ -0.19
PTCH1-209ENST00000437951 TRIM5Q9C035 493 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 BRMS1Q9HCU9 246 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 OFD1O75665 1012 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 UQCRHLA0A096LP55 91 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 UQCRHP07919 91 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 PDCP20941 246 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
PTCH1-209ENST00000437951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.83□□□□□ -0.196e-10■■■■■ 141.3
PTCH1-209ENST00000437951 TRDNQ13061 729 aa13.83□□□□□ -0.2
PTCH1-209ENST00000437951 CLASRPQ8N2M8 674 aaKnown RBP13.83□□□□□ -0.2
PTCH1-209ENST00000437951 POLR3GO15318 223 aaPredicted RBP13.82□□□□□ -0.2
PTCH1-209ENST00000437951 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
PTCH1-209ENST00000437951 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
PTCH1-209ENST00000437951 MICALCLQ6ZW33 695 aa13.82□□□□□ -0.2
PTCH1-209ENST00000437951 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
PTCH1-209ENST00000437951 GOLGA6L10A0A0M3HER8 536 aa13.82□□□□□ -0.2
PTCH1-209ENST00000437951 PSMA5P28066 241 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 PDILTQ8N807 584 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
PTCH1-209ENST00000437951 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 XBP1P17861 261 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 MLECQ14165 292 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 SLC4A10Q6U841 1118 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 ERICH2A1L162 156 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
PTCH1-209ENST00000437951 CBFA2T2O43439 604 aa13.81□□□□□ -0.2
PTCH1-209ENST00000437951 KINO60870 393 aaKnown RBP13.81□□□□□ -0.2
PTCH1-209ENST00000437951 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-209ENST00000437951 SPATA24Q86W54 205 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms