RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
CLCN2-204ENST00000434054 PLEKHH1Q9ULM0 1364 aa22.59■■□□□ 1.21
CLCN2-204ENST00000434054 KDM5DQ9BY66 1539 aa22.58■■□□□ 1.21
CLCN2-204ENST00000434054 TMF1P82094 1093 aa22.58■■□□□ 1.21
CLCN2-204ENST00000434054 MAST1Q9Y2H9 1570 aa22.58■■□□□ 1.2
CLCN2-204ENST00000434054 GSE1Q14687 1217 aa22.58■■□□□ 1.2
CLCN2-204ENST00000434054 WDR43Q15061 677 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLCN2-204ENST00000434054 DUSP27Q5VZP5 1158 aa22.57■■□□□ 1.2
CLCN2-204ENST00000434054 GGT6Q6P531 493 aa22.57■■□□□ 1.2
CLCN2-204ENST00000434054 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
CLCN2-204ENST00000434054 DUOX2Q9NRD8 1548 aa22.57■■□□□ 1.2
CLCN2-204ENST00000434054 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
CLCN2-204ENST00000434054 FRAT1Q92837 279 aaPredicted RBP22.57■■□□□ 1.2
CLCN2-204ENST00000434054 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
CLCN2-204ENST00000434054 ATP7AQ04656 1500 aa22.56■■□□□ 1.2
CLCN2-204ENST00000434054 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
CLCN2-204ENST00000434054 BLMP54132 1417 aaPredicted RBP22.56■■□□□ 1.2
CLCN2-204ENST00000434054 C8orf34Q49A92 452 aa22.55■■□□□ 1.2
CLCN2-204ENST00000434054 ERBINQ96RT1 1412 aa22.55■■□□□ 1.2
CLCN2-204ENST00000434054 KNSTRNQ9Y448 316 aa22.54■■□□□ 1.2
CLCN2-204ENST00000434054 A2MP01023 1474 aa22.54■■□□□ 1.2
CLCN2-204ENST00000434054 PLXNC1O60486 1568 aa22.53■■□□□ 1.2
CLCN2-204ENST00000434054 PPP2R1AP30153 589 aa22.53■■□□□ 1.2
CLCN2-204ENST00000434054 PLA2R1Q13018 1463 aa22.53■■□□□ 1.2
CLCN2-204ENST00000434054 COL17A1Q9UMD9 1497 aaPredicted RBP22.53■■□□□ 1.2
CLCN2-204ENST00000434054 ZNF518AQ6AHZ1 1483 aa22.53■■□□□ 1.2
CLCN2-204ENST00000434054 FRAT2O75474 233 aaPredicted RBP22.52■■□□□ 1.2
CLCN2-204ENST00000434054 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
CLCN2-204ENST00000434054 TSPOAP1O95153 1857 aa22.52■■□□□ 1.2
CLCN2-204ENST00000434054 TRPM1Q7Z4N2 1603 aa22.52■■□□□ 1.2
CLCN2-204ENST00000434054 CENPQQ7L2Z9 268 aaPredicted RBP22.52■■□□□ 1.2
CLCN2-204ENST00000434054 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
CLCN2-204ENST00000434054 FAM161AQ3B820 660 aa22.51■■□□□ 1.19
CLCN2-204ENST00000434054 GOLGA2Q08379 1002 aa22.51■■□□□ 1.19
CLCN2-204ENST00000434054 POGZQ7Z3K3 1410 aa22.51■■□□□ 1.19
CLCN2-204ENST00000434054 BCAR3O75815 825 aa22.5■■□□□ 1.19
CLCN2-204ENST00000434054 ZMYM4Q5VZL5 1548 aa22.47■■□□□ 1.19
CLCN2-204ENST00000434054 APAF1O14727 1248 aa22.46■■□□□ 1.19
CLCN2-204ENST00000434054 GPRASP1Q5JY77 1395 aa22.46■■□□□ 1.19
CLCN2-204ENST00000434054 MAGI2Q86UL8 1455 aa22.45■■□□□ 1.18
CLCN2-204ENST00000434054 INO80Q9ULG1 1556 aaPredicted RBP22.44■■□□□ 1.18
CLCN2-204ENST00000434054 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
CLCN2-204ENST00000434054 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
CLCN2-204ENST00000434054 KANK1Q14678 1352 aa22.42■■□□□ 1.18
CLCN2-204ENST00000434054 DIP2BQ9P265 1576 aa22.42■■□□□ 1.18
CLCN2-204ENST00000434054 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
CLCN2-204ENST00000434054 NEO1Q92859 1461 aa22.42■■□□□ 1.18
CLCN2-204ENST00000434054 KIDINS220Q9ULH0 1771 aa22.41■■□□□ 1.18
CLCN2-204ENST00000434054 IGHDP01880 384 aa22.41■■□□□ 1.18
CLCN2-204ENST00000434054 SLFN5Q08AF3 891 aa22.41■■□□□ 1.18
CLCN2-204ENST00000434054 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.41■■□□□ 1.18
CLCN2-204ENST00000434054 ZNF521Q96K83 1311 aa22.4■■□□□ 1.18
CLCN2-204ENST00000434054 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
CLCN2-204ENST00000434054 UNC13BO14795 1591 aa22.4■■□□□ 1.18
CLCN2-204ENST00000434054 PRDM15P57071 1507 aaPredicted RBP22.39■■□□□ 1.18
CLCN2-204ENST00000434054 CFAP74Q9C0B2 1584 aa22.39■■□□□ 1.18
CLCN2-204ENST00000434054 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.17
CLCN2-204ENST00000434054 SEC24BO95487 1268 aa22.39■■□□□ 1.17
CLCN2-204ENST00000434054 MLECQ14165 292 aa22.38■■□□□ 1.17
CLCN2-204ENST00000434054 CHGAP10645 457 aaKnown RBP22.36■■□□□ 1.17
CLCN2-204ENST00000434054 NEUROD2Q15784 382 aa22.36■■□□□ 1.17
CLCN2-204ENST00000434054 EIF5BO60841 1220 aaKnown RBP22.36■■□□□ 1.17
CLCN2-204ENST00000434054 PANK1Q8TE04 598 aa22.35■■□□□ 1.17
CLCN2-204ENST00000434054 SLKQ9H2G2 1235 aaPredicted RBP22.35■■□□□ 1.17
CLCN2-204ENST00000434054 COG6Q9Y2V7 657 aa22.34■■□□□ 1.17
CLCN2-204ENST00000434054 HECW2Q9P2P5 1572 aa22.34■■□□□ 1.17
CLCN2-204ENST00000434054 IQGAP3Q86VI3 1631 aa22.34■■□□□ 1.17
CLCN2-204ENST00000434054 MLH3Q9UHC1 1453 aa22.34■■□□□ 1.17
CLCN2-204ENST00000434054 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
CLCN2-204ENST00000434054 GLI2P10070 1586 aa22.33■■□□□ 1.16
CLCN2-204ENST00000434054 ARXQ96QS3 562 aa22.32■■□□□ 1.16
CLCN2-204ENST00000434054 CANXP27824 592 aaKnown RBP22.32■■□□□ 1.16
CLCN2-204ENST00000434054 INSRP06213 1382 aa22.31■■□□□ 1.16
CLCN2-204ENST00000434054 TNNT2P45379 298 aaPredicted RBP22.31■■□□□ 1.16
CLCN2-204ENST00000434054 ABCA6Q8N139 1617 aa22.3■■□□□ 1.16
CLCN2-204ENST00000434054 POGKQ9P215 609 aa22.29■■□□□ 1.16
CLCN2-204ENST00000434054 RRP7AQ9Y3A4 280 aaKnown RBP22.29■■□□□ 1.16
CLCN2-204ENST00000434054 USP19O94966 1318 aa22.28■■□□□ 1.16
CLCN2-204ENST00000434054 FRMPD1Q5SYB0 1578 aa22.27■■□□□ 1.16
CLCN2-204ENST00000434054 BCL2L13Q9BXK5 485 aa22.27■■□□□ 1.16
CLCN2-204ENST00000434054 TRMT2AQ8IZ69 625 aaKnown RBP22.27■■□□□ 1.16
CLCN2-204ENST00000434054 TNNQ9UQP3 1299 aa22.26■■□□□ 1.15
CLCN2-204ENST00000434054 CFAP65Q6ZU64 1925 aaKnown RBP22.26■■□□□ 1.15
CLCN2-204ENST00000434054 SPRYD3Q8NCJ5 442 aa22.25■■□□□ 1.15
CLCN2-204ENST00000434054 ATP10AO60312 1499 aa22.24■■□□□ 1.15
CLCN2-204ENST00000434054 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
CLCN2-204ENST00000434054 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
CLCN2-204ENST00000434054 RICTORQ6R327 1708 aa22.23■■□□□ 1.15
CLCN2-204ENST00000434054 E9PSI1 815 aa22.23■■□□□ 1.15
CLCN2-204ENST00000434054 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
CLCN2-204ENST00000434054 DIP2CQ9Y2E4 1556 aa22.23■■□□□ 1.15
CLCN2-204ENST00000434054 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
CLCN2-204ENST00000434054 MROH1Q8NDA8 1641 aa22.22■■□□□ 1.15
CLCN2-204ENST00000434054 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
CLCN2-204ENST00000434054 CDCA8Q53HL2 280 aa22.21■■□□□ 1.15
CLCN2-204ENST00000434054 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
CLCN2-204ENST00000434054 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
CLCN2-204ENST00000434054 CENPJQ9HC77 1338 aaPredicted RBP22.2■■□□□ 1.14
CLCN2-204ENST00000434054 EIF3AQ14152 1382 aaKnown RBP22.2■■□□□ 1.14
CLCN2-204ENST00000434054 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms