RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
CDH13-203ENST00000431540 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
CDH13-203ENST00000431540 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
CDH13-203ENST00000431540 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
CDH13-203ENST00000431540 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
CDH13-203ENST00000431540 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
CDH13-203ENST00000431540 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
CDH13-203ENST00000431540 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
CDH13-203ENST00000431540 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
CDH13-203ENST00000431540 KDM5AP29375 1690 aaKnown RBP13.09□□□□□ -0.31
CDH13-203ENST00000431540 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
CDH13-203ENST00000431540 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
CDH13-203ENST00000431540 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
CDH13-203ENST00000431540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
CDH13-203ENST00000431540 ABCC3O15438 1527 aa13.08□□□□□ -0.32
CDH13-203ENST00000431540 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
CDH13-203ENST00000431540 UBR1Q8IWV7 1749 aa13.06□□□□□ -0.32
CDH13-203ENST00000431540 SYNMO15061 1565 aa13.06□□□□□ -0.32
CDH13-203ENST00000431540 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
CDH13-203ENST00000431540 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
CDH13-203ENST00000431540 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
CDH13-203ENST00000431540 SLIT1O75093 1534 aa13.04□□□□□ -0.32
CDH13-203ENST00000431540 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
CDH13-203ENST00000431540 HSPA1LP34931 641 aa13.03□□□□□ -0.32
CDH13-203ENST00000431540 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
CDH13-203ENST00000431540 EID1Q9Y6B2 187 aa13.02□□□□□ -0.33
CDH13-203ENST00000431540 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.33
CDH13-203ENST00000431540 CEP152O94986 1710 aa13.02□□□□□ -0.33
CDH13-203ENST00000431540 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
CDH13-203ENST00000431540 LRRC7Q96NW7 1537 aa13.01□□□□□ -0.33
CDH13-203ENST00000431540 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
CDH13-203ENST00000431540 STRCP1A6NGW2 1772 aa13.01□□□□□ -0.33
CDH13-203ENST00000431540 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
CDH13-203ENST00000431540 KANK1Q14678 1352 aa13□□□□□ -0.33
CDH13-203ENST00000431540 LMTK2Q8IWU2 1503 aa12.99□□□□□ -0.33
CDH13-203ENST00000431540 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
CDH13-203ENST00000431540 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
CDH13-203ENST00000431540 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
CDH13-203ENST00000431540 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
CDH13-203ENST00000431540 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
CDH13-203ENST00000431540 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
CDH13-203ENST00000431540 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
CDH13-203ENST00000431540 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
CDH13-203ENST00000431540 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
CDH13-203ENST00000431540 ABCC5O15440 1437 aa12.96□□□□□ -0.33
CDH13-203ENST00000431540 ANKRD30AQ9BXX3 1397 aa12.96□□□□□ -0.33
CDH13-203ENST00000431540 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.33
CDH13-203ENST00000431540 XIRP1Q702N8 1843 aaKnown RBP12.96□□□□□ -0.33
CDH13-203ENST00000431540 TMEM2Q9UHN6 1383 aa12.95□□□□□ -0.34
CDH13-203ENST00000431540 LTKP29376 864 aa12.95□□□□□ -0.34
CDH13-203ENST00000431540 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
CDH13-203ENST00000431540 DAPK1P53355 1430 aa12.94□□□□□ -0.34
CDH13-203ENST00000431540 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
CDH13-203ENST00000431540 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
CDH13-203ENST00000431540 KCNA6P17658 529 aa12.93□□□□□ -0.34
CDH13-203ENST00000431540 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
CDH13-203ENST00000431540 TET3O43151 1660 aa12.93□□□□□ -0.34
CDH13-203ENST00000431540 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
CDH13-203ENST00000431540 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
CDH13-203ENST00000431540 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
CDH13-203ENST00000431540 EFCAB6Q5THR3 1501 aa12.92□□□□□ -0.34
CDH13-203ENST00000431540 NOS1P29475 1434 aa12.91□□□□□ -0.34
CDH13-203ENST00000431540 IDI1Q13907 227 aa12.91□□□□□ -0.34
CDH13-203ENST00000431540 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
CDH13-203ENST00000431540 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
CDH13-203ENST00000431540 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
CDH13-203ENST00000431540 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
CDH13-203ENST00000431540 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
CDH13-203ENST00000431540 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDH13-203ENST00000431540 TBX22Q9Y458 520 aa12.85□□□□□ -0.35
CDH13-203ENST00000431540 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
CDH13-203ENST00000431540 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
CDH13-203ENST00000431540 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
CDH13-203ENST00000431540 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
CDH13-203ENST00000431540 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
CDH13-203ENST00000431540 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
CDH13-203ENST00000431540 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
CDH13-203ENST00000431540 PELP1Q8IZL8 1130 aaKnown RBP12.82□□□□□ -0.36
CDH13-203ENST00000431540 MSH6P52701 1360 aa12.81□□□□□ -0.36
CDH13-203ENST00000431540 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
CDH13-203ENST00000431540 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
CDH13-203ENST00000431540 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
CDH13-203ENST00000431540 ZFYVE9O95405 1425 aa12.8□□□□□ -0.36
CDH13-203ENST00000431540 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
CDH13-203ENST00000431540 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
CDH13-203ENST00000431540 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
CDH13-203ENST00000431540 TMEM131LA2VDJ0 1609 aa12.8□□□□□ -0.36
CDH13-203ENST00000431540 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
CDH13-203ENST00000431540 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
CDH13-203ENST00000431540 UNC13BO14795 1591 aa12.78□□□□□ -0.36
CDH13-203ENST00000431540 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
CDH13-203ENST00000431540 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
CDH13-203ENST00000431540 CADPS2Q86UW7 1296 aa12.76□□□□□ -0.37
CDH13-203ENST00000431540 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
CDH13-203ENST00000431540 JCADQ9P266 1359 aa12.76□□□□□ -0.37
CDH13-203ENST00000431540 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
CDH13-203ENST00000431540 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
CDH13-203ENST00000431540 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
CDH13-203ENST00000431540 IQGAP3Q86VI3 1631 aa12.75□□□□□ -0.37
CDH13-203ENST00000431540 BCANQ96GW7 911 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms