RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 ZNF518AQ6AHZ1 1483 aa7.04□□□□□ -1.28
ATP13A3-202ENST00000429136 PLA2R1Q13018 1463 aa7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 EVC2Q86UK5 1308 aa7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 TNNT2P45379 298 aaPredicted RBP7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 LRPPRCP42704 1394 aaKnown RBP7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 SRPK2P78362 688 aaKnown RBP7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 EXOC6Q8TAG9 804 aa7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 ADAMTS8Q9UP79 889 aa7.03□□□□□ -1.28
ATP13A3-202ENST00000429136 PER1O15534 1290 aaPredicted RBP7.02□□□□□ -1.29
ATP13A3-202ENST00000429136 CLASP1Q7Z460 1538 aa7.02□□□□□ -1.29
ATP13A3-202ENST00000429136 CGNL1Q0VF96 1302 aa7.02□□□□□ -1.29
ATP13A3-202ENST00000429136 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
ATP13A3-202ENST00000429136 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 INSRP06213 1382 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 E9PSI1 815 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 STK26Q9P289 416 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 NEUROD2Q15784 382 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 CDCA7LQ96GN5 454 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 DDRGK1Q96HY6 314 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 PNNQ9H307 717 aaKnown RBP7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 ADGRF5Q8IZF2 1346 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 MAPK8IP3Q9UPT6 1336 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 BCORL1Q5H9F3 1711 aa7.01□□□□□ -1.29
ATP13A3-202ENST00000429136 SAFB2Q14151 953 aaKnown RBP eCLIP7□□□□□ -1.29
ATP13A3-202ENST00000429136 HDGFL2Q7Z4V5 671 aaPredicted RBP7□□□□□ -1.29
ATP13A3-202ENST00000429136 SLC52A1Q9NWF4 448 aa7□□□□□ -1.29
ATP13A3-202ENST00000429136 TERF2IPQ9NYB0 399 aa7□□□□□ -1.29
ATP13A3-202ENST00000429136 TRPM2O94759 1503 aa7□□□□□ -1.29
ATP13A3-202ENST00000429136 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
ATP13A3-202ENST00000429136 APAF1O14727 1248 aa7□□□□□ -1.29
ATP13A3-202ENST00000429136 SENP3Q9H4L4 574 aaPredicted RBP7□□□□□ -1.29
ATP13A3-202ENST00000429136 PRDM15P57071 1507 aaPredicted RBP7□□□□□ -1.29
ATP13A3-202ENST00000429136 ZFYVE16Q7Z3T8 1539 aa7□□□□□ -1.29
ATP13A3-202ENST00000429136 HDGFP51858 240 aaKnown RBP7□□□□□ -1.29
ATP13A3-202ENST00000429136 PTPRTO14522 1441 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 MAGI2Q86UL8 1455 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 NUTM2DQ5VT03 806 aaPredicted RBP6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 CYB5RLQ6IPT4 315 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 CRBNQ96SW2 442 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 RAPGEF3O95398 923 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 MS4A1P11836 297 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 TRPM1Q7Z4N2 1603 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 AMER1Q5JTC6 1135 aaPredicted RBP6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 TMEM132EQ6IEE7 984 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 NOS1P29475 1434 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 ASXL1Q8IXJ9 1541 aa6.99□□□□□ -1.29
ATP13A3-202ENST00000429136 U2SURPO15042 1029 aaKnown RBP6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 PLIN1O60240 522 aa6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 U2AF1L5P0DN76 240 aaPredicted RBP6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 U2AF1Q01081 240 aaKnown RBP eCLIP6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 RNF123Q5XPI4 1314 aa6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 MYH16Q9H6N6 1097 aa6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 NPC1L1Q9UHC9 1359 aa6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 CENPQQ7L2Z9 268 aaPredicted RBP6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 C14orf93Q9H972 538 aaKnown RBP6.98□□□□□ -1.29
ATP13A3-202ENST00000429136 PRKCSHP14314 528 aaPredicted RBP6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 FAM69CQ0P6D2 419 aa6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 FRAT1Q92837 279 aaPredicted RBP6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 UPF2Q9HAU5 1272 aaKnown RBP6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 LAMC1P11047 1609 aa6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 RUNDC1Q96C34 613 aa6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 PIK3C2GO75747 1445 aa6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 MLECQ14165 292 aa6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 IPO9Q96P70 1041 aaKnown RBP6.97□□□□□ -1.29
ATP13A3-202ENST00000429136 TET3O43151 1660 aa6.96□□□□□ -1.29
ATP13A3-202ENST00000429136 SLC12A5Q9H2X9 1139 aa6.96□□□□□ -1.29
ATP13A3-202ENST00000429136 POGZQ7Z3K3 1410 aa6.96□□□□□ -1.3
ATP13A3-202ENST00000429136 CFAP74Q9C0B2 1584 aa6.96□□□□□ -1.3
ATP13A3-202ENST00000429136 FTSJ3Q8IY81 847 aaKnown RBP6.96□□□□□ -1.3
ATP13A3-202ENST00000429136 MYOM2P54296 1465 aa6.96□□□□□ -1.3
ATP13A3-202ENST00000429136 NSD3Q9BZ95 1437 aa6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 PDE4AP27815 886 aa6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 NBR1Q14596 966 aa6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 BLMP54132 1417 aaPredicted RBP6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 RGS3P49796 1198 aa6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 MINK1Q8N4C8 1332 aaPredicted RBP6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 ZMYM4Q5VZL5 1548 aa6.95□□□□□ -1.3
ATP13A3-202ENST00000429136 ABCA9Q8IUA7 1624 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 PPM1GO15355 546 aaPredicted RBP6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 SLFN5Q08AF3 891 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 NEO1Q92859 1461 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 MTHFSP49914 203 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 MLH3Q9UHC1 1453 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 ATAD2Q6PL18 1390 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 CABP2Q9NPB3 220 aa6.94□□□□□ -1.3
ATP13A3-202ENST00000429136 RRP7AQ9Y3A4 280 aaKnown RBP6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 NSD2O96028 1365 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 IDI1Q13907 227 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 PMFBP1Q8TBY8 1022 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 SYNMO15061 1565 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 NINLQ9Y2I6 1382 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 CALD1Q05682 793 aaKnown RBP6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 DUSP27Q5VZP5 1158 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 CLTCL1P53675 1640 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 EFCAB6Q5THR3 1501 aa6.93□□□□□ -1.3
ATP13A3-202ENST00000429136 AAMPQ13685 434 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 SPHKAPQ2M3C7 1700 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms