RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 NUP155O75694 1391 aa12.05□□□□□ -0.48
SMARCAL1-206ENST00000427645 SCAF11Q99590 1463 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-206ENST00000427645 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
SMARCAL1-206ENST00000427645 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-206ENST00000427645 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-206ENST00000427645 ZC3H13Q5T200 1668 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-206ENST00000427645 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
SMARCAL1-206ENST00000427645 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
SMARCAL1-206ENST00000427645 IDI1Q13907 227 aa12.02□□□□□ -0.49
SMARCAL1-206ENST00000427645 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
SMARCAL1-206ENST00000427645 KANK1Q14678 1352 aa12.02□□□□□ -0.49
SMARCAL1-206ENST00000427645 UNC13BO14795 1591 aa12.01□□□□□ -0.49
SMARCAL1-206ENST00000427645 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
SMARCAL1-206ENST00000427645 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
SMARCAL1-206ENST00000427645 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
SMARCAL1-206ENST00000427645 SLIT1O75093 1534 aa12□□□□□ -0.49
SMARCAL1-206ENST00000427645 PRDM15P57071 1507 aaPredicted RBP12□□□□□ -0.49
SMARCAL1-206ENST00000427645 RGS17Q9UGC6 210 aaPredicted RBP11.99□□□□□ -0.49
SMARCAL1-206ENST00000427645 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
SMARCAL1-206ENST00000427645 PIK3C2BO00750 1634 aa11.99□□□□□ -0.49
SMARCAL1-206ENST00000427645 BCANQ96GW7 911 aa11.98□□□□□ -0.49
SMARCAL1-206ENST00000427645 IQGAP3Q86VI3 1631 aa11.97□□□□□ -0.49
SMARCAL1-206ENST00000427645 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
SMARCAL1-206ENST00000427645 SYNMO15061 1565 aa11.96□□□□□ -0.49
SMARCAL1-206ENST00000427645 PROSER2Q86WR7 435 aaPredicted RBP11.96□□□□□ -0.49
SMARCAL1-206ENST00000427645 KCNA6P17658 529 aa11.95□□□□□ -0.5
SMARCAL1-206ENST00000427645 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-206ENST00000427645 EFCAB6Q5THR3 1501 aa11.95□□□□□ -0.5
SMARCAL1-206ENST00000427645 ANKRD30BQ9BXX2 1392 aa11.93□□□□□ -0.5
SMARCAL1-206ENST00000427645 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
SMARCAL1-206ENST00000427645 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
SMARCAL1-206ENST00000427645 NEUROD1Q13562 356 aa11.92□□□□□ -0.5
SMARCAL1-206ENST00000427645 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
SMARCAL1-206ENST00000427645 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
SMARCAL1-206ENST00000427645 NOS1P29475 1434 aa11.92□□□□□ -0.5
SMARCAL1-206ENST00000427645 LMTK2Q8IWU2 1503 aa11.91□□□□□ -0.5
SMARCAL1-206ENST00000427645 TET3O43151 1660 aa11.91□□□□□ -0.5
SMARCAL1-206ENST00000427645 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
SMARCAL1-206ENST00000427645 FAM135BQ49AJ0 1406 aa11.91□□□□□ -0.5
SMARCAL1-206ENST00000427645 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
SMARCAL1-206ENST00000427645 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-206ENST00000427645 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-206ENST00000427645 ADGRB3O60242 1522 aa11.88□□□□□ -0.51
SMARCAL1-206ENST00000427645 SLAIN2Q9P270 581 aa11.88□□□□□ -0.51
SMARCAL1-206ENST00000427645 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
SMARCAL1-206ENST00000427645 E9PCH4 1651 aa11.87□□□□□ -0.51
SMARCAL1-206ENST00000427645 ROBO1Q9Y6N7 1651 aa11.87□□□□□ -0.51
SMARCAL1-206ENST00000427645 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
SMARCAL1-206ENST00000427645 C14orf37Q86TY3 774 aa11.86□□□□□ -0.51
SMARCAL1-206ENST00000427645 MSH6P52701 1360 aa11.86□□□□□ -0.51
SMARCAL1-206ENST00000427645 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
SMARCAL1-206ENST00000427645 PLEKHG1Q9ULL1 1385 aa11.85□□□□□ -0.51
SMARCAL1-206ENST00000427645 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
SMARCAL1-206ENST00000427645 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-206ENST00000427645 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-206ENST00000427645 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
SMARCAL1-206ENST00000427645 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
SMARCAL1-206ENST00000427645 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-206ENST00000427645 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-206ENST00000427645 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
SMARCAL1-206ENST00000427645 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
SMARCAL1-206ENST00000427645 TMEM131LA2VDJ0 1609 aa11.81□□□□□ -0.52
SMARCAL1-206ENST00000427645 MYO5BQ9ULV0 1848 aa11.81□□□□□ -0.52
SMARCAL1-206ENST00000427645 TRPM2O94759 1503 aa11.81□□□□□ -0.52
SMARCAL1-206ENST00000427645 ADAMTS13Q76LX8 1427 aa11.8□□□□□ -0.52
SMARCAL1-206ENST00000427645 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMARCAL1-206ENST00000427645 L3MBTL2Q969R5 705 aa11.8□□□□□ -0.52
SMARCAL1-206ENST00000427645 JCADQ9P266 1359 aa11.79□□□□□ -0.52
SMARCAL1-206ENST00000427645 AMOTL2Q9Y2J4 779 aa11.79□□□□□ -0.52
SMARCAL1-206ENST00000427645 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
SMARCAL1-206ENST00000427645 ATF3P18847 181 aa11.78□□□□□ -0.52
SMARCAL1-206ENST00000427645 MEX3CQ5U5Q3 659 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-206ENST00000427645 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
SMARCAL1-206ENST00000427645 PTPRUQ92729 1446 aa11.77□□□□□ -0.52
SMARCAL1-206ENST00000427645 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-206ENST00000427645 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-206ENST00000427645 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.53
SMARCAL1-206ENST00000427645 LRP6O75581 1613 aa11.77□□□□□ -0.53
SMARCAL1-206ENST00000427645 CHD2O14647 1828 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-206ENST00000427645 KIF1BO60333 1816 aa11.76□□□□□ -0.53
SMARCAL1-206ENST00000427645 ZNF326Q5BKZ1 582 aaKnown RBP11.76□□□□□ -0.53
SMARCAL1-206ENST00000427645 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
SMARCAL1-206ENST00000427645 CADPS2Q86UW7 1296 aa11.76□□□□□ -0.53
SMARCAL1-206ENST00000427645 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-206ENST00000427645 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
SMARCAL1-206ENST00000427645 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
SMARCAL1-206ENST00000427645 DDX17Q92841 729 aaKnown RBP11.75□□□□□ -0.53
SMARCAL1-206ENST00000427645 COL16A1Q07092 1604 aaPredicted RBP11.75□□□□□ -0.53
SMARCAL1-206ENST00000427645 ZBTB22O15209 634 aa11.74□□□□□ -0.53
SMARCAL1-206ENST00000427645 RPGRIP1LQ68CZ1 1315 aa11.74□□□□□ -0.53
SMARCAL1-206ENST00000427645 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
SMARCAL1-206ENST00000427645 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
SMARCAL1-206ENST00000427645 METP08581 1390 aa11.73□□□□□ -0.53
SMARCAL1-206ENST00000427645 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
SMARCAL1-206ENST00000427645 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
SMARCAL1-206ENST00000427645 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
SMARCAL1-206ENST00000427645 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
SMARCAL1-206ENST00000427645 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
SMARCAL1-206ENST00000427645 KDM2AQ9Y2K7 1162 aa11.71□□□□□ -0.53
SMARCAL1-206ENST00000427645 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms