RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 CAMSAP1Q5T5Y3 1602 aa13.01□□□□□ -0.33
VSIG4-203ENST00000427538 CEP152O94986 1710 aa13.01□□□□□ -0.33
VSIG4-203ENST00000427538 ERVK-7P63135 1459 aa13□□□□□ -0.33
VSIG4-203ENST00000427538 PKD2Q13563 968 aa13□□□□□ -0.33
VSIG4-203ENST00000427538 THEMISQ8N1K5 641 aaPredicted RBP13□□□□□ -0.33
VSIG4-203ENST00000427538 SLC52A1Q9NWF4 448 aa12.99□□□□□ -0.33
VSIG4-203ENST00000427538 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
VSIG4-203ENST00000427538 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
VSIG4-203ENST00000427538 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
VSIG4-203ENST00000427538 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
VSIG4-203ENST00000427538 NLRP1Q9C000 1473 aa12.98□□□□□ -0.33
VSIG4-203ENST00000427538 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
VSIG4-203ENST00000427538 PREX1Q8TCU6 1659 aa12.98□□□□□ -0.33
VSIG4-203ENST00000427538 TET3O43151 1660 aa12.96□□□□□ -0.33
VSIG4-203ENST00000427538 IQGAP3Q86VI3 1631 aa12.96□□□□□ -0.33
VSIG4-203ENST00000427538 HRCP23327 699 aa12.96□□□□□ -0.33
VSIG4-203ENST00000427538 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.34
VSIG4-203ENST00000427538 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
VSIG4-203ENST00000427538 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
VSIG4-203ENST00000427538 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
VSIG4-203ENST00000427538 IDI1Q13907 227 aa12.95□□□□□ -0.34
VSIG4-203ENST00000427538 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
VSIG4-203ENST00000427538 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
VSIG4-203ENST00000427538 EVX2Q03828 476 aa12.94□□□□□ -0.34
VSIG4-203ENST00000427538 ANKLE2Q86XL3 938 aa12.94□□□□□ -0.34
VSIG4-203ENST00000427538 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
VSIG4-203ENST00000427538 MYO3AQ8NEV4 1616 aa12.94□□□□□ -0.34
VSIG4-203ENST00000427538 UGGT1Q9NYU2 1555 aa12.94□□□□□ -0.34
VSIG4-203ENST00000427538 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
VSIG4-203ENST00000427538 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
VSIG4-203ENST00000427538 BCANQ96GW7 911 aa12.93□□□□□ -0.34
VSIG4-203ENST00000427538 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
VSIG4-203ENST00000427538 NOS1P29475 1434 aa12.93□□□□□ -0.34
VSIG4-203ENST00000427538 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
VSIG4-203ENST00000427538 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
VSIG4-203ENST00000427538 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
VSIG4-203ENST00000427538 TXNDC2Q86VQ3 553 aa12.9□□□□□ -0.34
VSIG4-203ENST00000427538 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.35
VSIG4-203ENST00000427538 E9PCH4 1651 aa12.89□□□□□ -0.35
VSIG4-203ENST00000427538 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.88□□□□□ -0.35
VSIG4-203ENST00000427538 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
VSIG4-203ENST00000427538 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
VSIG4-203ENST00000427538 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
VSIG4-203ENST00000427538 SYNMO15061 1565 aa12.86□□□□□ -0.35
VSIG4-203ENST00000427538 FKBP8Q14318 412 aa12.86□□□□□ -0.35
VSIG4-203ENST00000427538 PTPRTO14522 1441 aa12.86□□□□□ -0.35
VSIG4-203ENST00000427538 TMEM2Q9UHN6 1383 aa12.85□□□□□ -0.35
VSIG4-203ENST00000427538 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
VSIG4-203ENST00000427538 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
VSIG4-203ENST00000427538 NUTM2DQ5VT03 806 aaPredicted RBP12.84□□□□□ -0.35
VSIG4-203ENST00000427538 ADGRB3O60242 1522 aa12.83□□□□□ -0.35
VSIG4-203ENST00000427538 TRPM2O94759 1503 aa12.83□□□□□ -0.35
VSIG4-203ENST00000427538 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
VSIG4-203ENST00000427538 RIMS2Q9UQ26 1411 aa12.82□□□□□ -0.36
VSIG4-203ENST00000427538 LTKP29376 864 aa12.82□□□□□ -0.36
VSIG4-203ENST00000427538 SCAF11Q99590 1463 aaKnown RBP12.82□□□□□ -0.36
VSIG4-203ENST00000427538 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
VSIG4-203ENST00000427538 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
VSIG4-203ENST00000427538 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
VSIG4-203ENST00000427538 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
VSIG4-203ENST00000427538 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
VSIG4-203ENST00000427538 SLIT1O75093 1534 aa12.78□□□□□ -0.36
VSIG4-203ENST00000427538 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
VSIG4-203ENST00000427538 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
VSIG4-203ENST00000427538 CLTCL1P53675 1640 aa12.77□□□□□ -0.36
VSIG4-203ENST00000427538 ANKRD30BQ9BXX2 1392 aa12.77□□□□□ -0.37
VSIG4-203ENST00000427538 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
VSIG4-203ENST00000427538 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.37
VSIG4-203ENST00000427538 NEUROD1Q13562 356 aa12.76□□□□□ -0.37
VSIG4-203ENST00000427538 MED14O60244 1454 aa12.75□□□□□ -0.37
VSIG4-203ENST00000427538 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
VSIG4-203ENST00000427538 PLEKHG1Q9ULL1 1385 aa12.75□□□□□ -0.37
VSIG4-203ENST00000427538 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
VSIG4-203ENST00000427538 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
VSIG4-203ENST00000427538 KIF1BO60333 1816 aa12.74□□□□□ -0.37
VSIG4-203ENST00000427538 ZFYVE9O95405 1425 aa12.73□□□□□ -0.37
VSIG4-203ENST00000427538 DHX57Q6P158 1386 aaKnown RBP12.73□□□□□ -0.37
VSIG4-203ENST00000427538 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
VSIG4-203ENST00000427538 POLR1AO95602 1720 aaPredicted RBP12.73□□□□□ -0.37
VSIG4-203ENST00000427538 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
VSIG4-203ENST00000427538 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
VSIG4-203ENST00000427538 IQGAP1P46940 1657 aa12.71□□□□□ -0.37
VSIG4-203ENST00000427538 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.37
VSIG4-203ENST00000427538 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
VSIG4-203ENST00000427538 GABBR2O75899 941 aa12.7□□□□□ -0.38
VSIG4-203ENST00000427538 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
VSIG4-203ENST00000427538 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
VSIG4-203ENST00000427538 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
VSIG4-203ENST00000427538 KCNA6P17658 529 aa12.69□□□□□ -0.38
VSIG4-203ENST00000427538 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
VSIG4-203ENST00000427538 SPATA31E1Q6ZUB1 1445 aa12.69□□□□□ -0.38
VSIG4-203ENST00000427538 MYO5BQ9ULV0 1848 aa12.68□□□□□ -0.38
VSIG4-203ENST00000427538 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
VSIG4-203ENST00000427538 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
VSIG4-203ENST00000427538 ADGRF5Q8IZF2 1346 aa12.67□□□□□ -0.38
VSIG4-203ENST00000427538 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
VSIG4-203ENST00000427538 MIER1Q8N108 512 aa12.66□□□□□ -0.38
VSIG4-203ENST00000427538 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
VSIG4-203ENST00000427538 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
VSIG4-203ENST00000427538 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms