RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
LINC01049-201ENST00000426840 EIF2AK4Q9P2K8 1649 aaKnown RBP11.16□□□□□ -0.62
LINC01049-201ENST00000426840 PTPRMP28827 1452 aa11.15□□□□□ -0.62
LINC01049-201ENST00000426840 CEBPAP49715 358 aaPredicted RBP11.15□□□□□ -0.62
LINC01049-201ENST00000426840 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
LINC01049-201ENST00000426840 WASHC2CQ9Y4E1 1318 aa11.14□□□□□ -0.63
LINC01049-201ENST00000426840 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
LINC01049-201ENST00000426840 HFM1A2PYH4 1435 aa11.14□□□□□ -0.63
LINC01049-201ENST00000426840 ZMYM3Q14202 1370 aa11.14□□□□□ -0.63
LINC01049-201ENST00000426840 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
LINC01049-201ENST00000426840 CNTLNQ9NXG0 1405 aa11.13□□□□□ -0.63
LINC01049-201ENST00000426840 RIMS1Q86UR5 1692 aaKnown RBP11.13□□□□□ -0.63
LINC01049-201ENST00000426840 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
LINC01049-201ENST00000426840 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
LINC01049-201ENST00000426840 PKD2Q13563 968 aa11.12□□□□□ -0.63
LINC01049-201ENST00000426840 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
LINC01049-201ENST00000426840 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
LINC01049-201ENST00000426840 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
LINC01049-201ENST00000426840 DEPDC5O75140 1603 aa11.11□□□□□ -0.63
LINC01049-201ENST00000426840 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
LINC01049-201ENST00000426840 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
LINC01049-201ENST00000426840 CLTCQ00610 1675 aaKnown RBP11.11□□□□□ -0.63
LINC01049-201ENST00000426840 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
LINC01049-201ENST00000426840 KANK1Q14678 1352 aa11.1□□□□□ -0.63
LINC01049-201ENST00000426840 VWDEQ8N2E2 1590 aa11.1□□□□□ -0.63
LINC01049-201ENST00000426840 ABCC3O15438 1527 aa11.09□□□□□ -0.63
LINC01049-201ENST00000426840 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
LINC01049-201ENST00000426840 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
LINC01049-201ENST00000426840 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
LINC01049-201ENST00000426840 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
LINC01049-201ENST00000426840 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
LINC01049-201ENST00000426840 MROH2AA6NES4 1674 aa11.08□□□□□ -0.64
LINC01049-201ENST00000426840 NUP155O75694 1391 aa11.08□□□□□ -0.64
LINC01049-201ENST00000426840 C3P01024 1663 aa11.08□□□□□ -0.64
LINC01049-201ENST00000426840 UNC13BO14795 1591 aa11.07□□□□□ -0.64
LINC01049-201ENST00000426840 HRCP23327 699 aa11.07□□□□□ -0.64
LINC01049-201ENST00000426840 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
LINC01049-201ENST00000426840 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
LINC01049-201ENST00000426840 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
LINC01049-201ENST00000426840 SETD1BQ9UPS6 1966 aaKnown RBP11.07□□□□□ -0.64
LINC01049-201ENST00000426840 CEP152O94986 1710 aa11.06□□□□□ -0.64
LINC01049-201ENST00000426840 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
LINC01049-201ENST00000426840 ARHGAP31Q2M1Z3 1444 aa11.06□□□□□ -0.64
LINC01049-201ENST00000426840 ZC3H13Q5T200 1668 aaKnown RBP11.05□□□□□ -0.64
LINC01049-201ENST00000426840 PZPP20742 1482 aa11.05□□□□□ -0.64
LINC01049-201ENST00000426840 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
LINC01049-201ENST00000426840 CFAP65Q6ZU64 1925 aaKnown RBP11.04□□□□□ -0.64
LINC01049-201ENST00000426840 NPATQ14207 1427 aa11.04□□□□□ -0.64
LINC01049-201ENST00000426840 ATMINO43313 823 aaPredicted RBP11.04□□□□□ -0.64
LINC01049-201ENST00000426840 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
LINC01049-201ENST00000426840 TMEM106CQ9BVX2 250 aa11.04□□□□□ -0.64
LINC01049-201ENST00000426840 CAMSAP1Q5T5Y3 1602 aa11.03□□□□□ -0.64
LINC01049-201ENST00000426840 IQGAP3Q86VI3 1631 aa11.03□□□□□ -0.64
LINC01049-201ENST00000426840 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
LINC01049-201ENST00000426840 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
LINC01049-201ENST00000426840 TTLL13PA6NNM8 815 aa11.02□□□□□ -0.65
LINC01049-201ENST00000426840 TIE1P35590 1138 aa11.02□□□□□ -0.65
LINC01049-201ENST00000426840 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
LINC01049-201ENST00000426840 MPHOSPH9Q99550 1183 aa11.02□□□□□ -0.65
LINC01049-201ENST00000426840 RGL2O15211 777 aa11.01□□□□□ -0.65
LINC01049-201ENST00000426840 ASTLQ6HA08 431 aaPredicted RBP11.01□□□□□ -0.65
LINC01049-201ENST00000426840 TET3O43151 1660 aa11.01□□□□□ -0.65
LINC01049-201ENST00000426840 TNRQ92752 1358 aa11.01□□□□□ -0.65
LINC01049-201ENST00000426840 NOS1P29475 1434 aa11.01□□□□□ -0.65
LINC01049-201ENST00000426840 ERVK-7P63135 1459 aa11□□□□□ -0.65
LINC01049-201ENST00000426840 EFCAB6Q5THR3 1501 aa11□□□□□ -0.65
LINC01049-201ENST00000426840 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
LINC01049-201ENST00000426840 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
LINC01049-201ENST00000426840 PSEN1P49768 467 aa11□□□□□ -0.65
LINC01049-201ENST00000426840 IDI1Q13907 227 aa10.99□□□□□ -0.65
LINC01049-201ENST00000426840 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
LINC01049-201ENST00000426840 RPRD2Q5VT52 1461 aaKnown RBP10.99□□□□□ -0.65
LINC01049-201ENST00000426840 E9PCH4 1651 aa10.98□□□□□ -0.65
LINC01049-201ENST00000426840 PREX1Q8TCU6 1659 aa10.98□□□□□ -0.65
LINC01049-201ENST00000426840 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
LINC01049-201ENST00000426840 LMTK3Q96Q04 1460 aa10.98□□□□□ -0.65
LINC01049-201ENST00000426840 HSPA2P54652 639 aa10.97□□□□□ -0.65
LINC01049-201ENST00000426840 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
LINC01049-201ENST00000426840 PTPRTO14522 1441 aa10.97□□□□□ -0.65
LINC01049-201ENST00000426840 PCGF6Q9BYE7 350 aa10.96□□□□□ -0.65
LINC01049-201ENST00000426840 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.65
LINC01049-201ENST00000426840 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
LINC01049-201ENST00000426840 SYNMO15061 1565 aa10.95□□□□□ -0.66
LINC01049-201ENST00000426840 PLA2R1Q13018 1463 aa10.95□□□□□ -0.66
LINC01049-201ENST00000426840 NLRP1Q9C000 1473 aa10.95□□□□□ -0.66
LINC01049-201ENST00000426840 A2ML1A8K2U0 1454 aa10.94□□□□□ -0.66
LINC01049-201ENST00000426840 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
LINC01049-201ENST00000426840 MYO3AQ8NEV4 1616 aa10.93□□□□□ -0.66
LINC01049-201ENST00000426840 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
LINC01049-201ENST00000426840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
LINC01049-201ENST00000426840 VGFO15240 615 aaPredicted RBP10.92□□□□□ -0.66
LINC01049-201ENST00000426840 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
LINC01049-201ENST00000426840 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
LINC01049-201ENST00000426840 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
LINC01049-201ENST00000426840 PIK3C2BO00750 1634 aa10.91□□□□□ -0.66
LINC01049-201ENST00000426840 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.66
LINC01049-201ENST00000426840 SPHKAPQ2M3C7 1700 aa10.9□□□□□ -0.66
LINC01049-201ENST00000426840 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
LINC01049-201ENST00000426840 SLC39A7Q92504 469 aa10.9□□□□□ -0.66
LINC01049-201ENST00000426840 CABP2Q9NPB3 220 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms