RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
CLCN3P1-201ENST00000423965 DHX29Q7Z478 1369 aaKnown RBP13.16□□□□□ -0.3
CLCN3P1-201ENST00000423965 PLEKHH2Q8IVE3 1493 aa13.16□□□□□ -0.3
CLCN3P1-201ENST00000423965 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
CLCN3P1-201ENST00000423965 INO80Q9ULG1 1556 aaPredicted RBP13.15□□□□□ -0.3
CLCN3P1-201ENST00000423965 SYCP2Q9BX26 1530 aa13.15□□□□□ -0.3
CLCN3P1-201ENST00000423965 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
CLCN3P1-201ENST00000423965 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
CLCN3P1-201ENST00000423965 KIF3BO15066 747 aa13.14□□□□□ -0.31
CLCN3P1-201ENST00000423965 NUBP1P53384 320 aa13.14□□□□□ -0.31
CLCN3P1-201ENST00000423965 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
CLCN3P1-201ENST00000423965 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
CLCN3P1-201ENST00000423965 ADGBQ8N7X0 1667 aa13.13□□□□□ -0.31
CLCN3P1-201ENST00000423965 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
CLCN3P1-201ENST00000423965 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
CLCN3P1-201ENST00000423965 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
CLCN3P1-201ENST00000423965 SCAF11Q99590 1463 aaKnown RBP13.12□□□□□ -0.31
CLCN3P1-201ENST00000423965 KCNA6P17658 529 aa13.12□□□□□ -0.31
CLCN3P1-201ENST00000423965 LTKP29376 864 aa13.11□□□□□ -0.31
CLCN3P1-201ENST00000423965 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
CLCN3P1-201ENST00000423965 CFDP1Q9UEE9 299 aaPredicted RBP13.11□□□□□ -0.31
CLCN3P1-201ENST00000423965 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
CLCN3P1-201ENST00000423965 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
CLCN3P1-201ENST00000423965 LRP6O75581 1613 aa13.1□□□□□ -0.31
CLCN3P1-201ENST00000423965 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
CLCN3P1-201ENST00000423965 EID1Q9Y6B2 187 aa13.1□□□□□ -0.31
CLCN3P1-201ENST00000423965 EEA1Q15075 1411 aa13.1□□□□□ -0.31
CLCN3P1-201ENST00000423965 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
CLCN3P1-201ENST00000423965 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
CLCN3P1-201ENST00000423965 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
CLCN3P1-201ENST00000423965 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
CLCN3P1-201ENST00000423965 MSH6P52701 1360 aa13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 NUTM2BA6NNL0 878 aaPredicted RBP13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 NUTM2EB1AL46 878 aaPredicted RBP13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
CLCN3P1-201ENST00000423965 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
CLCN3P1-201ENST00000423965 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
CLCN3P1-201ENST00000423965 GABBR2O75899 941 aa13.06□□□□□ -0.32
CLCN3P1-201ENST00000423965 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
CLCN3P1-201ENST00000423965 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
CLCN3P1-201ENST00000423965 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
CLCN3P1-201ENST00000423965 ATAD2Q6PL18 1390 aa13.05□□□□□ -0.32
CLCN3P1-201ENST00000423965 SLIT1O75093 1534 aa13.04□□□□□ -0.32
CLCN3P1-201ENST00000423965 MAP3K1Q13233 1512 aa13.04□□□□□ -0.32
CLCN3P1-201ENST00000423965 SETBP1Q9Y6X0 1596 aa13.04□□□□□ -0.32
CLCN3P1-201ENST00000423965 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
CLCN3P1-201ENST00000423965 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
CLCN3P1-201ENST00000423965 AFF2P51816 1311 aa13.04□□□□□ -0.32
CLCN3P1-201ENST00000423965 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
CLCN3P1-201ENST00000423965 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
CLCN3P1-201ENST00000423965 RGS12O14924 1447 aa13.03□□□□□ -0.32
CLCN3P1-201ENST00000423965 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
CLCN3P1-201ENST00000423965 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
CLCN3P1-201ENST00000423965 ABCC3O15438 1527 aa13.02□□□□□ -0.33
CLCN3P1-201ENST00000423965 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
CLCN3P1-201ENST00000423965 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
CLCN3P1-201ENST00000423965 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
CLCN3P1-201ENST00000423965 UBR1Q8IWV7 1749 aa13□□□□□ -0.33
CLCN3P1-201ENST00000423965 ERVK-7P63135 1459 aa13□□□□□ -0.33
CLCN3P1-201ENST00000423965 CASKIN1Q8WXD9 1431 aa13□□□□□ -0.33
CLCN3P1-201ENST00000423965 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
CLCN3P1-201ENST00000423965 CLCN6P51797 869 aa13□□□□□ -0.33
CLCN3P1-201ENST00000423965 GSE1Q14687 1217 aa12.99□□□□□ -0.33
CLCN3P1-201ENST00000423965 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
CLCN3P1-201ENST00000423965 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
CLCN3P1-201ENST00000423965 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
CLCN3P1-201ENST00000423965 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
CLCN3P1-201ENST00000423965 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
CLCN3P1-201ENST00000423965 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
CLCN3P1-201ENST00000423965 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
CLCN3P1-201ENST00000423965 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
CLCN3P1-201ENST00000423965 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.34
CLCN3P1-201ENST00000423965 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
CLCN3P1-201ENST00000423965 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
CLCN3P1-201ENST00000423965 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
CLCN3P1-201ENST00000423965 TET3O43151 1660 aa12.93□□□□□ -0.34
CLCN3P1-201ENST00000423965 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
CLCN3P1-201ENST00000423965 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
CLCN3P1-201ENST00000423965 PYGBP11216 843 aa12.92□□□□□ -0.34
CLCN3P1-201ENST00000423965 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
CLCN3P1-201ENST00000423965 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
CLCN3P1-201ENST00000423965 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
CLCN3P1-201ENST00000423965 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
CLCN3P1-201ENST00000423965 EP400Q96L91 3159 aa12.91□□□□□ -0.34
CLCN3P1-201ENST00000423965 MAP3K13O43283 966 aa12.91□□□□□ -0.34
CLCN3P1-201ENST00000423965 ATF3P18847 181 aa12.9□□□□□ -0.34
CLCN3P1-201ENST00000423965 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
CLCN3P1-201ENST00000423965 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
CLCN3P1-201ENST00000423965 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 LRP5O75197 1615 aa12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 TSPY4P0CV99 314 aa12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 TSPY10P0CW01 314 aa12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 CCDC141Q6ZP82 1450 aa12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
CLCN3P1-201ENST00000423965 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms