RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-205ENST00000423113 RAB3GAP2Q9H2M9 1393 aa6.95□□□□□ -1.3
ITGB1-205ENST00000423113 ASXL1Q8IXJ9 1541 aa6.95□□□□□ -1.3
ITGB1-205ENST00000423113 ZNF316A6NFI3 1004 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-205ENST00000423113 ANKRD30BQ9BXX2 1392 aa6.95□□□□□ -1.3
ITGB1-205ENST00000423113 SUPT16HQ9Y5B9 1047 aaKnown RBP6.95□□□□□ -1.3
ITGB1-205ENST00000423113 CRYBG1Q9Y4K1 1723 aa6.94□□□□□ -1.3
ITGB1-205ENST00000423113 HNRNPMP52272 730 aaKnown RBP eCLIP6.94□□□□□ -1.39e-6■■■■□ 20.2
ITGB1-205ENST00000423113 MIER1Q8N108 512 aa6.93□□□□□ -1.3
ITGB1-205ENST00000423113 AFAP1Q8N556 730 aa6.93□□□□□ -1.3
ITGB1-205ENST00000423113 ITSN1Q15811 1721 aa6.93□□□□□ -1.3
ITGB1-205ENST00000423113 DHX57Q6P158 1386 aaKnown RBP6.93□□□□□ -1.3
ITGB1-205ENST00000423113 AKAP12Q02952 1782 aa6.93□□□□□ -1.3
ITGB1-205ENST00000423113 NALCNQ8IZF0 1738 aa6.92□□□□□ -1.3
ITGB1-205ENST00000423113 TECPR2O15040 1411 aa6.92□□□□□ -1.3
ITGB1-205ENST00000423113 DEKP35659 375 aaKnown RBP6.92□□□□□ -1.3
ITGB1-205ENST00000423113 KCNH8Q96L42 1107 aa6.92□□□□□ -1.3
ITGB1-205ENST00000423113 MYOM1P52179 1685 aa6.92□□□□□ -1.3
ITGB1-205ENST00000423113 FMN2Q9NZ56 1722 aa6.92□□□□□ -1.3
ITGB1-205ENST00000423113 RAPGEF3O95398 923 aa6.92□□□□□ -1.3
ITGB1-205ENST00000423113 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-205ENST00000423113 DAXXQ9UER7 740 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-205ENST00000423113 SALL2Q9Y467 1007 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-205ENST00000423113 CFAP65Q6ZU64 1925 aaKnown RBP6.91□□□□□ -1.3
ITGB1-205ENST00000423113 MARF1Q9Y4F3 1742 aaKnown RBP6.91□□□□□ -1.3
ITGB1-205ENST00000423113 NRKQ7Z2Y5 1582 aa6.91□□□□□ -1.3
ITGB1-205ENST00000423113 LTBP4Q8N2S1 1624 aa6.91□□□□□ -1.3
ITGB1-205ENST00000423113 USP32Q8NFA0 1604 aa6.91□□□□□ -1.3
ITGB1-205ENST00000423113 PIK3C2GO75747 1445 aa6.91□□□□□ -1.3
ITGB1-205ENST00000423113 MYT1LQ9UL68 1186 aa6.91□□□□□ -1.3
ITGB1-205ENST00000423113 ANKRD26Q9UPS8 1709 aa6.91□□□□□ -1.3
ITGB1-205ENST00000423113 QRICH2Q9H0J4 1663 aa6.9□□□□□ -1.3
ITGB1-205ENST00000423113 LRRC7Q96NW7 1537 aa6.9□□□□□ -1.3
ITGB1-205ENST00000423113 HNRNPUL2Q1KMD3 747 aaKnown RBP6.9□□□□□ -1.31
ITGB1-205ENST00000423113 ZMYM3Q14202 1370 aa6.89□□□□□ -1.31
ITGB1-205ENST00000423113 KANK1Q14678 1352 aa6.89□□□□□ -1.31
ITGB1-205ENST00000423113 NBR1Q14596 966 aa6.89□□□□□ -1.31
ITGB1-205ENST00000423113 MON2Q7Z3U7 1717 aa6.89□□□□□ -1.31
ITGB1-205ENST00000423113 NHSL1Q5SYE7 1610 aa6.89□□□□□ -1.31
ITGB1-205ENST00000423113 NKTRP30414 1462 aaKnown RBP6.88□□□□□ -1.31
ITGB1-205ENST00000423113 RALGAPBQ86X10 1494 aa6.88□□□□□ -1.31
ITGB1-205ENST00000423113 GPRASP1Q5JY77 1395 aa6.88□□□□□ -1.31
ITGB1-205ENST00000423113 PHRF1Q9P1Y6 1649 aaKnown RBP6.88□□□□□ -1.31
ITGB1-205ENST00000423113 CDC42BPGQ6DT37 1551 aa6.88□□□□□ -1.31
ITGB1-205ENST00000423113 TSPY4P0CV99 314 aa6.88□□□□□ -1.31
ITGB1-205ENST00000423113 TSPY10P0CW01 314 aa6.88□□□□□ -1.31
ITGB1-205ENST00000423113 FKBP8Q14318 412 aa6.88□□□□□ -1.31
ITGB1-205ENST00000423113 RBM19Q9Y4C8 960 aaKnown RBP6.87□□□□□ -1.31
ITGB1-205ENST00000423113 KDM4FA0A1W2PPD8 638 aa6.87□□□□□ -1.31
ITGB1-205ENST00000423113 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
ITGB1-205ENST00000423113 ABCA3Q99758 1704 aa6.87□□□□□ -1.31
ITGB1-205ENST00000423113 KIF1AQ12756 1690 aa6.87□□□□□ -1.31
ITGB1-205ENST00000423113 RANGAP1P46060 587 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-205ENST00000423113 STAC3Q96MF2 364 aa6.87□□□□□ -1.31
ITGB1-205ENST00000423113 PIK3R4Q99570 1358 aa6.86□□□□□ -1.31
ITGB1-205ENST00000423113 PTCH1Q13635 1447 aa6.86□□□□□ -1.31
ITGB1-205ENST00000423113 NUP155O75694 1391 aa6.86□□□□□ -1.31
ITGB1-205ENST00000423113 TRPM3Q9HCF6 1732 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-205ENST00000423113 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-205ENST00000423113 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-205ENST00000423113 SCAF11Q99590 1463 aaKnown RBP6.85□□□□□ -1.31
ITGB1-205ENST00000423113 TNRQ92752 1358 aa6.85□□□□□ -1.31
ITGB1-205ENST00000423113 ITGAEP38570 1179 aa6.85□□□□□ -1.31
ITGB1-205ENST00000423113 PLEKHG1Q9ULL1 1385 aa6.85□□□□□ -1.31
ITGB1-205ENST00000423113 PKNOX2Q96KN3 472 aa6.85□□□□□ -1.31
ITGB1-205ENST00000423113 TIMELESSQ9UNS1 1208 aa6.85□□□□□ -1.31
ITGB1-205ENST00000423113 ADAMTS13Q76LX8 1427 aa6.84□□□□□ -1.31
ITGB1-205ENST00000423113 ARID3CA6NKF2 412 aa6.84□□□□□ -1.31
ITGB1-205ENST00000423113 UBE2Q2Q8WVN8 375 aa6.84□□□□□ -1.31
ITGB1-205ENST00000423113 MST1RQ04912 1400 aa6.84□□□□□ -1.31
ITGB1-205ENST00000423113 RPGRIP1LQ68CZ1 1315 aa6.83□□□□□ -1.32
ITGB1-205ENST00000423113 PODXL2Q9NZ53 605 aa6.83□□□□□ -1.32
ITGB1-205ENST00000423113 ATP1B4Q9UN42 357 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-205ENST00000423113 GLIPR1L2Q4G1C9 344 aa6.83□□□□□ -1.32
ITGB1-205ENST00000423113 ALS2Q96Q42 1657 aa6.82□□□□□ -1.32
ITGB1-205ENST00000423113 SLC52A1Q9NWF4 448 aa6.82□□□□□ -1.32
ITGB1-205ENST00000423113 TMEM2Q9UHN6 1383 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 KIF20BQ96Q89 1820 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 PLEKHG5O94827 1062 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 AMER1Q5JTC6 1135 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-205ENST00000423113 SBNO2Q9Y2G9 1366 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 WNK3Q9BYP7 1800 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 DCCP43146 1447 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 SHPRHQ149N8 1683 aa6.81□□□□□ -1.32
ITGB1-205ENST00000423113 RGPD8O14715 1765 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-205ENST00000423113 MED1Q15648 1581 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-205ENST00000423113 FAM135BQ49AJ0 1406 aa6.8□□□□□ -1.32
ITGB1-205ENST00000423113 ERICH6BQ5W0A0 696 aa6.8□□□□□ -1.32
ITGB1-205ENST00000423113 CCDC144AA2RUR9 1427 aa6.79□□□□□ -1.32
ITGB1-205ENST00000423113 AHDC1Q5TGY3 1603 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-205ENST00000423113 MPHOSPH9Q99550 1183 aa6.79□□□□□ -1.32
ITGB1-205ENST00000423113 CAMTA1Q9Y6Y1 1673 aa6.79□□□□□ -1.32
ITGB1-205ENST00000423113 RRP7BPQ9NSQ0 103 aa6.79□□□□□ -1.32
ITGB1-205ENST00000423113 ABCC6O95255 1503 aa6.78□□□□□ -1.32
ITGB1-205ENST00000423113 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.78□□□□□ -1.32
ITGB1-205ENST00000423113 RIMS2Q9UQ26 1411 aa6.78□□□□□ -1.32
ITGB1-205ENST00000423113 FAM50AQ14320 339 aaKnown RBP6.77□□□□□ -1.33
ITGB1-205ENST00000423113 SIRT1Q96EB6 747 aa6.77□□□□□ -1.33
ITGB1-205ENST00000423113 ZNF777Q9ULD5 760 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-205ENST00000423113 KIF3BO15066 747 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms