RNA–Protein interactions for RNA: ENST00000422221.1

CLIC4P3-201, Transcript of chloride intracellular channel 4 pseudogene 3, humanhuman

BASIC

Gene CLIC4P3, Length 752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P3-201ENST00000422221 A2MP01023 1474 aa12.18□□□□□ -0.46
CLIC4P3-201ENST00000422221 UBAP1LF5GYI3 381 aa12.17□□□□□ -0.46
CLIC4P3-201ENST00000422221 PLXNC1O60486 1568 aa12.17□□□□□ -0.46
CLIC4P3-201ENST00000422221 SPATA31D1Q6ZQQ2 1576 aa12.17□□□□□ -0.46
CLIC4P3-201ENST00000422221 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
CLIC4P3-201ENST00000422221 CLTCQ00610 1675 aaKnown RBP12.16□□□□□ -0.46
CLIC4P3-201ENST00000422221 TCOF1Q13428 1488 aaKnown RBP12.16□□□□□ -0.46
CLIC4P3-201ENST00000422221 FKBP8Q14318 412 aa12.16□□□□□ -0.46
CLIC4P3-201ENST00000422221 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
CLIC4P3-201ENST00000422221 PLA2R1Q13018 1463 aa12.15□□□□□ -0.46
CLIC4P3-201ENST00000422221 PLCG2P16885 1265 aa12.15□□□□□ -0.46
CLIC4P3-201ENST00000422221 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
CLIC4P3-201ENST00000422221 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
CLIC4P3-201ENST00000422221 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
CLIC4P3-201ENST00000422221 PYGBP11216 843 aa12.13□□□□□ -0.47
CLIC4P3-201ENST00000422221 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
CLIC4P3-201ENST00000422221 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
CLIC4P3-201ENST00000422221 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
CLIC4P3-201ENST00000422221 ZNF142P52746 1687 aaPredicted RBP12.12□□□□□ -0.47
CLIC4P3-201ENST00000422221 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
CLIC4P3-201ENST00000422221 DHX29Q7Z478 1369 aaKnown RBP12.11□□□□□ -0.47
CLIC4P3-201ENST00000422221 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
CLIC4P3-201ENST00000422221 RTEL1-TNFRSF6BF6WH68 1400 aa12.1□□□□□ -0.47
CLIC4P3-201ENST00000422221 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
CLIC4P3-201ENST00000422221 DNMT1P26358 1616 aaKnown RBP12.09□□□□□ -0.47
CLIC4P3-201ENST00000422221 KIF3BO15066 747 aa12.08□□□□□ -0.48
CLIC4P3-201ENST00000422221 HSPA1LP34931 641 aa12.08□□□□□ -0.48
CLIC4P3-201ENST00000422221 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
CLIC4P3-201ENST00000422221 ADGBQ8N7X0 1667 aa12.07□□□□□ -0.48
CLIC4P3-201ENST00000422221 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
CLIC4P3-201ENST00000422221 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
CLIC4P3-201ENST00000422221 TNRQ92752 1358 aa12.06□□□□□ -0.48
CLIC4P3-201ENST00000422221 PIP4K2BP78356 416 aa12.06□□□□□ -0.48
CLIC4P3-201ENST00000422221 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
CLIC4P3-201ENST00000422221 SHANK2Q9UPX8 1470 aa12.05□□□□□ -0.48
CLIC4P3-201ENST00000422221 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
CLIC4P3-201ENST00000422221 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
CLIC4P3-201ENST00000422221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLIC4P3-201ENST00000422221 TOM1O60784 492 aa12.04□□□□□ -0.48
CLIC4P3-201ENST00000422221 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
CLIC4P3-201ENST00000422221 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
CLIC4P3-201ENST00000422221 PZPP20742 1482 aa12.03□□□□□ -0.48
CLIC4P3-201ENST00000422221 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
CLIC4P3-201ENST00000422221 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
CLIC4P3-201ENST00000422221 PDCD7Q8N8D1 485 aaKnown RBP12.03□□□□□ -0.48
CLIC4P3-201ENST00000422221 CPS1P31327 1500 aa12.01□□□□□ -0.49
CLIC4P3-201ENST00000422221 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
CLIC4P3-201ENST00000422221 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
CLIC4P3-201ENST00000422221 ALKQ9UM73 1620 aa12□□□□□ -0.49
CLIC4P3-201ENST00000422221 MED14O60244 1454 aa12□□□□□ -0.49
CLIC4P3-201ENST00000422221 NCOA2Q15596 1464 aa12□□□□□ -0.49
CLIC4P3-201ENST00000422221 CCDC141Q6ZP82 1450 aa12□□□□□ -0.49
CLIC4P3-201ENST00000422221 KDM5DQ9BY66 1539 aa12□□□□□ -0.49
CLIC4P3-201ENST00000422221 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
CLIC4P3-201ENST00000422221 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
CLIC4P3-201ENST00000422221 CAMSAP2Q08AD1 1489 aa11.99□□□□□ -0.49
CLIC4P3-201ENST00000422221 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
CLIC4P3-201ENST00000422221 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
CLIC4P3-201ENST00000422221 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
CLIC4P3-201ENST00000422221 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
CLIC4P3-201ENST00000422221 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
CLIC4P3-201ENST00000422221 FAM135AQ9P2D6 1515 aa11.97□□□□□ -0.49
CLIC4P3-201ENST00000422221 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
CLIC4P3-201ENST00000422221 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
CLIC4P3-201ENST00000422221 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
CLIC4P3-201ENST00000422221 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
CLIC4P3-201ENST00000422221 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
CLIC4P3-201ENST00000422221 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
CLIC4P3-201ENST00000422221 LRRC7Q96NW7 1537 aa11.94□□□□□ -0.5
CLIC4P3-201ENST00000422221 STRCP1A6NGW2 1772 aa11.94□□□□□ -0.5
CLIC4P3-201ENST00000422221 ABCC3O15438 1527 aa11.93□□□□□ -0.5
CLIC4P3-201ENST00000422221 LTKP29376 864 aa11.93□□□□□ -0.5
CLIC4P3-201ENST00000422221 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
CLIC4P3-201ENST00000422221 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
CLIC4P3-201ENST00000422221 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
CLIC4P3-201ENST00000422221 ERVK-7P63135 1459 aa11.91□□□□□ -0.5
CLIC4P3-201ENST00000422221 RNF17Q9BXT8 1623 aaKnown RBP11.91□□□□□ -0.5
CLIC4P3-201ENST00000422221 RGS17Q9UGC6 210 aaPredicted RBP11.91□□□□□ -0.5
CLIC4P3-201ENST00000422221 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
CLIC4P3-201ENST00000422221 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
CLIC4P3-201ENST00000422221 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
CLIC4P3-201ENST00000422221 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
CLIC4P3-201ENST00000422221 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
CLIC4P3-201ENST00000422221 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
CLIC4P3-201ENST00000422221 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
CLIC4P3-201ENST00000422221 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
CLIC4P3-201ENST00000422221 SNPHO15079 494 aa11.88□□□□□ -0.51
CLIC4P3-201ENST00000422221 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
CLIC4P3-201ENST00000422221 ZNF467Q7Z7K2 595 aaPredicted RBP11.88□□□□□ -0.51
CLIC4P3-201ENST00000422221 CFAP65Q6ZU64 1925 aaKnown RBP11.88□□□□□ -0.51
CLIC4P3-201ENST00000422221 ZC3H13Q5T200 1668 aaKnown RBP11.87□□□□□ -0.51
CLIC4P3-201ENST00000422221 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
CLIC4P3-201ENST00000422221 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
CLIC4P3-201ENST00000422221 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
CLIC4P3-201ENST00000422221 ARHGAP23Q9P227 1491 aa11.86□□□□□ -0.51
CLIC4P3-201ENST00000422221 GSE1Q14687 1217 aa11.85□□□□□ -0.51
CLIC4P3-201ENST00000422221 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
CLIC4P3-201ENST00000422221 EIF2AK4Q9P2K8 1649 aaKnown RBP11.85□□□□□ -0.51
CLIC4P3-201ENST00000422221 SLIT1O75093 1534 aa11.85□□□□□ -0.51
CLIC4P3-201ENST00000422221 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms