RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
RFX3-205ENST00000420720 RGS12O14924 1447 aa11.33□□□□□ -0.6
RFX3-205ENST00000420720 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
RFX3-205ENST00000420720 GABBR2O75899 941 aa11.32□□□□□ -0.6
RFX3-205ENST00000420720 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
RFX3-205ENST00000420720 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
RFX3-205ENST00000420720 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
RFX3-205ENST00000420720 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
RFX3-205ENST00000420720 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
RFX3-205ENST00000420720 UGGT1Q9NYU2 1555 aa11.31□□□□□ -0.6
RFX3-205ENST00000420720 COL16A1Q07092 1604 aaPredicted RBP11.31□□□□□ -0.6
RFX3-205ENST00000420720 TSPY4P0CV99 314 aa11.3□□□□□ -0.6
RFX3-205ENST00000420720 TSPY10P0CW01 314 aa11.3□□□□□ -0.6
RFX3-205ENST00000420720 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
RFX3-205ENST00000420720 CCDC141Q6ZP82 1450 aa11.3□□□□□ -0.6
RFX3-205ENST00000420720 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
RFX3-205ENST00000420720 EP400Q96L91 3159 aa11.3□□□□□ -0.6
RFX3-205ENST00000420720 CAMSAP2Q08AD1 1489 aa11.29□□□□□ -0.6
RFX3-205ENST00000420720 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
RFX3-205ENST00000420720 THEMISQ8N1K5 641 aaPredicted RBP11.28□□□□□ -0.6
RFX3-205ENST00000420720 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
RFX3-205ENST00000420720 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
RFX3-205ENST00000420720 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
RFX3-205ENST00000420720 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
RFX3-205ENST00000420720 ADGBQ8N7X0 1667 aa11.27□□□□□ -0.61
RFX3-205ENST00000420720 PZPP20742 1482 aa11.26□□□□□ -0.61
RFX3-205ENST00000420720 MEX3CQ5U5Q3 659 aaKnown RBP11.26□□□□□ -0.61
RFX3-205ENST00000420720 LRP5O75197 1615 aa11.26□□□□□ -0.61
RFX3-205ENST00000420720 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
RFX3-205ENST00000420720 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
RFX3-205ENST00000420720 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
RFX3-205ENST00000420720 SPATA31A6Q5VVP1 1343 aa11.25□□□□□ -0.61
RFX3-205ENST00000420720 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
RFX3-205ENST00000420720 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
RFX3-205ENST00000420720 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
RFX3-205ENST00000420720 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
RFX3-205ENST00000420720 SHPRHQ149N8 1683 aa11.22□□□□□ -0.61
RFX3-205ENST00000420720 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
RFX3-205ENST00000420720 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
RFX3-205ENST00000420720 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
RFX3-205ENST00000420720 ARHGEF5Q12774 1597 aa11.21□□□□□ -0.61
RFX3-205ENST00000420720 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
RFX3-205ENST00000420720 AFF2P51816 1311 aa11.2□□□□□ -0.62
RFX3-205ENST00000420720 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
RFX3-205ENST00000420720 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
RFX3-205ENST00000420720 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
RFX3-205ENST00000420720 PROM2Q8N271 834 aa11.18□□□□□ -0.62
RFX3-205ENST00000420720 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
RFX3-205ENST00000420720 LTKP29376 864 aa11.17□□□□□ -0.62
RFX3-205ENST00000420720 RBM6P78332 1123 aaKnown RBP11.17□□□□□ -0.62
RFX3-205ENST00000420720 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
RFX3-205ENST00000420720 SLAIN2Q9P270 581 aa11.17□□□□□ -0.62
RFX3-205ENST00000420720 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
RFX3-205ENST00000420720 ABCC3O15438 1527 aa11.16□□□□□ -0.62
RFX3-205ENST00000420720 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
RFX3-205ENST00000420720 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.62
RFX3-205ENST00000420720 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
RFX3-205ENST00000420720 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
RFX3-205ENST00000420720 ERVK-7P63135 1459 aa11.14□□□□□ -0.63
RFX3-205ENST00000420720 ARHGAP23Q9P227 1491 aa11.14□□□□□ -0.63
RFX3-205ENST00000420720 AHDC1Q5TGY3 1603 aaPredicted RBP11.14□□□□□ -0.63
RFX3-205ENST00000420720 KIF15Q9NS87 1388 aa11.14□□□□□ -0.63
RFX3-205ENST00000420720 ABCC5O15440 1437 aa11.13□□□□□ -0.63
RFX3-205ENST00000420720 YY1P25490 414 aa11.13□□□□□ -0.63
RFX3-205ENST00000420720 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
RFX3-205ENST00000420720 QTRT2Q9H974 415 aaKnown RBP11.13□□□□□ -0.63
RFX3-205ENST00000420720 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
RFX3-205ENST00000420720 SLIT1O75093 1534 aa11.13□□□□□ -0.63
RFX3-205ENST00000420720 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
RFX3-205ENST00000420720 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
RFX3-205ENST00000420720 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
RFX3-205ENST00000420720 MROH1Q8NDA8 1641 aa11.11□□□□□ -0.63
RFX3-205ENST00000420720 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
RFX3-205ENST00000420720 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
RFX3-205ENST00000420720 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
RFX3-205ENST00000420720 KCNA6P17658 529 aa11.1□□□□□ -0.63
RFX3-205ENST00000420720 MSH6P52701 1360 aa11.1□□□□□ -0.63
RFX3-205ENST00000420720 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
RFX3-205ENST00000420720 DAPK1P53355 1430 aa11.09□□□□□ -0.63
RFX3-205ENST00000420720 ARHGAP31Q2M1Z3 1444 aa11.09□□□□□ -0.63
RFX3-205ENST00000420720 ERBINQ96RT1 1412 aa11.09□□□□□ -0.63
RFX3-205ENST00000420720 NKTRP30414 1462 aaKnown RBP11.08□□□□□ -0.64
RFX3-205ENST00000420720 KANK1Q14678 1352 aa11.08□□□□□ -0.64
RFX3-205ENST00000420720 EID1Q9Y6B2 187 aa11.08□□□□□ -0.64
RFX3-205ENST00000420720 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
RFX3-205ENST00000420720 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
RFX3-205ENST00000420720 IDI1Q13907 227 aa11.07□□□□□ -0.64
RFX3-205ENST00000420720 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
RFX3-205ENST00000420720 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
RFX3-205ENST00000420720 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
RFX3-205ENST00000420720 TET3O43151 1660 aa11.06□□□□□ -0.64
RFX3-205ENST00000420720 CEP152O94986 1710 aa11.06□□□□□ -0.64
RFX3-205ENST00000420720 HRCP23327 699 aa11.05□□□□□ -0.64
RFX3-205ENST00000420720 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
RFX3-205ENST00000420720 DEFB132Q7Z7B7 95 aa11.05□□□□□ -0.64
RFX3-205ENST00000420720 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
RFX3-205ENST00000420720 TMEM2Q9UHN6 1383 aa11.04□□□□□ -0.64
RFX3-205ENST00000420720 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
RFX3-205ENST00000420720 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
RFX3-205ENST00000420720 GALR2O43603 387 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms