RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 POLA2Q14181 598 aa11.93□□□□□ -0.5
SP140-204ENST00000417495 EIF2AK4Q9P2K8 1649 aaKnown RBP11.93□□□□□ -0.5
SP140-204ENST00000417495 NEURL4Q96JN8 1562 aa11.93□□□□□ -0.5
SP140-204ENST00000417495 ERBINQ96RT1 1412 aa11.92□□□□□ -0.5
SP140-204ENST00000417495 ZMYND10O75800 440 aa11.92□□□□□ -0.5
SP140-204ENST00000417495 ITGAEP38570 1179 aa11.92□□□□□ -0.5
SP140-204ENST00000417495 ATP10AO60312 1499 aa11.91□□□□□ -0.5
SP140-204ENST00000417495 BCORL1Q5H9F3 1711 aa11.91□□□□□ -0.5
SP140-204ENST00000417495 ANKRD50Q9ULJ7 1429 aa11.91□□□□□ -0.5
SP140-204ENST00000417495 DEPDC5O75140 1603 aa11.91□□□□□ -0.5
SP140-204ENST00000417495 MFAP1P55081 439 aaKnown RBP11.9□□□□□ -0.5
SP140-204ENST00000417495 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.5
SP140-204ENST00000417495 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
SP140-204ENST00000417495 INO80Q9ULG1 1556 aaPredicted RBP11.89□□□□□ -0.51
SP140-204ENST00000417495 TONSLQ96HA7 1378 aa11.89□□□□□ -0.51
SP140-204ENST00000417495 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
SP140-204ENST00000417495 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
SP140-204ENST00000417495 MPHOSPH9Q99550 1183 aa11.89□□□□□ -0.51
SP140-204ENST00000417495 WASHC2CQ9Y4E1 1318 aa11.88□□□□□ -0.51
SP140-204ENST00000417495 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
SP140-204ENST00000417495 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
SP140-204ENST00000417495 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
SP140-204ENST00000417495 KDM4CQ9H3R0 1056 aa11.88□□□□□ -0.51
SP140-204ENST00000417495 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
SP140-204ENST00000417495 LAMC1P11047 1609 aa11.88□□□□□ -0.51
SP140-204ENST00000417495 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
SP140-204ENST00000417495 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
SP140-204ENST00000417495 VWDEQ8N2E2 1590 aa11.85□□□□□ -0.51
SP140-204ENST00000417495 STK25O00506 426 aa11.85□□□□□ -0.51
SP140-204ENST00000417495 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
SP140-204ENST00000417495 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
SP140-204ENST00000417495 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
SP140-204ENST00000417495 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
SP140-204ENST00000417495 IRF5Q13568 498 aa11.85□□□□□ -0.51
SP140-204ENST00000417495 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
SP140-204ENST00000417495 ZFYVE16Q7Z3T8 1539 aa11.84□□□□□ -0.51
SP140-204ENST00000417495 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
SP140-204ENST00000417495 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
SP140-204ENST00000417495 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
SP140-204ENST00000417495 GLI2P10070 1586 aa11.84□□□□□ -0.51
SP140-204ENST00000417495 FAM43AQ8N2R8 423 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
SP140-204ENST00000417495 RRP7BPQ9NSQ0 103 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 PRDM4Q9UKN5 801 aa11.83□□□□□ -0.52
SP140-204ENST00000417495 FTSJ3Q8IY81 847 aaKnown RBP11.82□□□□□ -0.52
SP140-204ENST00000417495 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
SP140-204ENST00000417495 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
SP140-204ENST00000417495 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
SP140-204ENST00000417495 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
SP140-204ENST00000417495 KDM5CP41229 1560 aa11.81□□□□□ -0.52
SP140-204ENST00000417495 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
SP140-204ENST00000417495 SIN3AQ96ST3 1273 aa11.8□□□□□ -0.52
SP140-204ENST00000417495 LMTK2Q8IWU2 1503 aa11.8□□□□□ -0.52
SP140-204ENST00000417495 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
SP140-204ENST00000417495 TET3O43151 1660 aa11.79□□□□□ -0.52
SP140-204ENST00000417495 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
SP140-204ENST00000417495 CENPJQ9HC77 1338 aaPredicted RBP11.79□□□□□ -0.52
SP140-204ENST00000417495 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
SP140-204ENST00000417495 PRDM15P57071 1507 aaPredicted RBP11.78□□□□□ -0.52
SP140-204ENST00000417495 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
SP140-204ENST00000417495 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
SP140-204ENST00000417495 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
SP140-204ENST00000417495 NEO1Q92859 1461 aa11.78□□□□□ -0.52
SP140-204ENST00000417495 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
SP140-204ENST00000417495 SPATA31E1Q6ZUB1 1445 aa11.78□□□□□ -0.52
SP140-204ENST00000417495 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.52
SP140-204ENST00000417495 ATP7AQ04656 1500 aa11.77□□□□□ -0.52
SP140-204ENST00000417495 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
SP140-204ENST00000417495 ASXL2Q76L83 1435 aa11.77□□□□□ -0.53
SP140-204ENST00000417495 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
SP140-204ENST00000417495 MAP3K4Q9Y6R4 1608 aa11.75□□□□□ -0.53
SP140-204ENST00000417495 NCLP19338 710 aaKnown RBP11.75□□□□□ -0.53
SP140-204ENST00000417495 ZNF777Q9ULD5 760 aaPredicted RBP11.75□□□□□ -0.53
SP140-204ENST00000417495 FANCAO15360 1455 aa11.75□□□□□ -0.53
SP140-204ENST00000417495 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
SP140-204ENST00000417495 CEP152O94986 1710 aa11.74□□□□□ -0.53
SP140-204ENST00000417495 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
SP140-204ENST00000417495 TRPM2O94759 1503 aa11.74□□□□□ -0.53
SP140-204ENST00000417495 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
SP140-204ENST00000417495 PTPRTO14522 1441 aa11.74□□□□□ -0.53
SP140-204ENST00000417495 TRAIPQ9BWF2 469 aa11.73□□□□□ -0.53
SP140-204ENST00000417495 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
SP140-204ENST00000417495 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
SP140-204ENST00000417495 KIDINS220Q9ULH0 1771 aa11.73□□□□□ -0.53
SP140-204ENST00000417495 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
SP140-204ENST00000417495 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
SP140-204ENST00000417495 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
SP140-204ENST00000417495 FAM177A1Q8N128 213 aaPredicted RBP11.73□□□□□ -0.53
SP140-204ENST00000417495 SPHKAPQ2M3C7 1700 aa11.73□□□□□ -0.53
SP140-204ENST00000417495 NUP155O75694 1391 aa11.72□□□□□ -0.53
SP140-204ENST00000417495 MROH1Q8NDA8 1641 aa11.72□□□□□ -0.53
SP140-204ENST00000417495 TRPM1Q7Z4N2 1603 aa11.72□□□□□ -0.53
SP140-204ENST00000417495 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
SP140-204ENST00000417495 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.53
SP140-204ENST00000417495 PLEKHG3A1L390 1219 aa11.71□□□□□ -0.54
SP140-204ENST00000417495 TRAK2O60296 914 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms