RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 ATP10AO60312 1499 aa11.34□□□□□ -0.59
FNDC3B-203ENST00000416957 DEPDC5O75140 1603 aa11.34□□□□□ -0.59
FNDC3B-203ENST00000416957 FAM193AP78312 1265 aa11.34□□□□□ -0.59
FNDC3B-203ENST00000416957 ZNF644Q9H582 1327 aaPredicted RBP11.33□□□□□ -0.6
FNDC3B-203ENST00000416957 ZNF777Q9ULD5 760 aaPredicted RBP11.33□□□□□ -0.6
FNDC3B-203ENST00000416957 C11orf95C9JLR9 678 aaPredicted RBP11.33□□□□□ -0.6
FNDC3B-203ENST00000416957 ANKRD30AQ9BXX3 1397 aa11.33□□□□□ -0.6
FNDC3B-203ENST00000416957 SPAG9O60271 1321 aaKnown RBP11.32□□□□□ -0.6
FNDC3B-203ENST00000416957 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
FNDC3B-203ENST00000416957 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
FNDC3B-203ENST00000416957 PTMSP20962 102 aa11.32□□□□□ -0.6
FNDC3B-203ENST00000416957 UNC13BO14795 1591 aa11.32□□□□□ -0.6
FNDC3B-203ENST00000416957 PTMAP06454 111 aaKnown RBP11.32□□□□□ -0.6
FNDC3B-203ENST00000416957 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
FNDC3B-203ENST00000416957 A2MP01023 1474 aa11.31□□□□□ -0.6
FNDC3B-203ENST00000416957 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■■■□□ 18.2
FNDC3B-203ENST00000416957 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
FNDC3B-203ENST00000416957 NCOA1Q15788 1441 aa11.31□□□□□ -0.6
FNDC3B-203ENST00000416957 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
FNDC3B-203ENST00000416957 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
FNDC3B-203ENST00000416957 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
FNDC3B-203ENST00000416957 HFM1A2PYH4 1435 aa11.3□□□□□ -0.6
FNDC3B-203ENST00000416957 PTPRKQ15262 1439 aa11.29□□□□□ -0.6
FNDC3B-203ENST00000416957 FAM50AQ14320 339 aaKnown RBP11.29□□□□□ -0.6
FNDC3B-203ENST00000416957 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
FNDC3B-203ENST00000416957 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
FNDC3B-203ENST00000416957 PRDM15P57071 1507 aaPredicted RBP11.29□□□□□ -0.6
FNDC3B-203ENST00000416957 PRDM16Q9HAZ2 1276 aa11.29□□□□□ -0.6
FNDC3B-203ENST00000416957 MROH2AA6NES4 1674 aa11.28□□□□□ -0.6
FNDC3B-203ENST00000416957 YEATS2Q9ULM3 1422 aa11.28□□□□□ -0.6
FNDC3B-203ENST00000416957 KDM5DQ9BY66 1539 aa11.28□□□□□ -0.6
FNDC3B-203ENST00000416957 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
FNDC3B-203ENST00000416957 ZNF830Q96NB3 372 aaPredicted RBP11.28□□□□□ -0.6
FNDC3B-203ENST00000416957 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
FNDC3B-203ENST00000416957 RAPGEF3O95398 923 aa11.27□□□□□ -0.6
FNDC3B-203ENST00000416957 KIF15Q9NS87 1388 aa11.27□□□□□ -0.61
FNDC3B-203ENST00000416957 AFAP1Q8N556 730 aa11.27□□□□□ -0.61
FNDC3B-203ENST00000416957 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
FNDC3B-203ENST00000416957 MROH1Q8NDA8 1641 aa11.26□□□□□ -0.61
FNDC3B-203ENST00000416957 IQGAP3Q86VI3 1631 aa11.25□□□□□ -0.61
FNDC3B-203ENST00000416957 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
FNDC3B-203ENST00000416957 ADAMTSL3P82987 1691 aa11.25□□□□□ -0.61
FNDC3B-203ENST00000416957 NAIPQ13075 1403 aa11.25□□□□□ -0.61
FNDC3B-203ENST00000416957 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
FNDC3B-203ENST00000416957 OS9Q13438 667 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-203ENST00000416957 RGS22Q8NE09 1264 aa11.24□□□□□ -0.61
FNDC3B-203ENST00000416957 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-203ENST00000416957 MCCP23508 829 aa11.23□□□□□ -0.61
FNDC3B-203ENST00000416957 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
FNDC3B-203ENST00000416957 NEFMP07197 916 aa11.23□□□□□ -0.61
FNDC3B-203ENST00000416957 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
FNDC3B-203ENST00000416957 CLGNO14967 610 aa11.22□□□□□ -0.61
FNDC3B-203ENST00000416957 TET3O43151 1660 aa11.22□□□□□ -0.61
FNDC3B-203ENST00000416957 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
FNDC3B-203ENST00000416957 CNTLNQ9NXG0 1405 aa11.21□□□□□ -0.62
FNDC3B-203ENST00000416957 SETD5Q9C0A6 1442 aa11.21□□□□□ -0.62
FNDC3B-203ENST00000416957 ARID3AQ99856 593 aa11.2□□□□□ -0.62
FNDC3B-203ENST00000416957 CAMSAP1Q5T5Y3 1602 aa11.2□□□□□ -0.62
FNDC3B-203ENST00000416957 CEP152O94986 1710 aa11.18□□□□□ -0.62
FNDC3B-203ENST00000416957 ABCC3O15438 1527 aa11.18□□□□□ -0.62
FNDC3B-203ENST00000416957 VGLL3A8MV65 326 aa11.18□□□□□ -0.62
FNDC3B-203ENST00000416957 SOX12O15370 315 aa11.18□□□□□ -0.62
FNDC3B-203ENST00000416957 HDAC5Q9UQL6 1122 aa11.17□□□□□ -0.62
FNDC3B-203ENST00000416957 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
FNDC3B-203ENST00000416957 APPP05067 770 aa11.17□□□□□ -0.62
FNDC3B-203ENST00000416957 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
FNDC3B-203ENST00000416957 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
FNDC3B-203ENST00000416957 EFCAB6Q5THR3 1501 aa11.17□□□□□ -0.62
FNDC3B-203ENST00000416957 MADDQ8WXG6 1647 aa11.16□□□□□ -0.62
FNDC3B-203ENST00000416957 RPRD2Q5VT52 1461 aaKnown RBP11.16□□□□□ -0.62
FNDC3B-203ENST00000416957 KANK1Q14678 1352 aa11.16□□□□□ -0.62
FNDC3B-203ENST00000416957 ANAPC15P60006 121 aa11.16□□□□□ -0.62
FNDC3B-203ENST00000416957 ARHGAP31Q2M1Z3 1444 aa11.16□□□□□ -0.62
FNDC3B-203ENST00000416957 ZNF622Q969S3 477 aaKnown RBP eCLIP11.15□□□□□ -0.622e-6■■□□□ 14.2
FNDC3B-203ENST00000416957 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
FNDC3B-203ENST00000416957 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
FNDC3B-203ENST00000416957 RIMS1Q86UR5 1692 aaKnown RBP11.14□□□□□ -0.63
FNDC3B-203ENST00000416957 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
FNDC3B-203ENST00000416957 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
FNDC3B-203ENST00000416957 CHIC2Q9UKJ5 165 aa11.14□□□□□ -0.63
FNDC3B-203ENST00000416957 ZNF428Q96B54 188 aa11.14□□□□□ -0.63
FNDC3B-203ENST00000416957 C3P01024 1663 aa11.14□□□□□ -0.63
FNDC3B-203ENST00000416957 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
FNDC3B-203ENST00000416957 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
FNDC3B-203ENST00000416957 GPATCH11Q8N954 259 aa11.13□□□□□ -0.63
FNDC3B-203ENST00000416957 RAB3GAP2Q9H2M9 1393 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 E9PCH4 1651 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 KDM5AP29375 1690 aaKnown RBP11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 PZPP20742 1482 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 ITGAEP38570 1179 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
FNDC3B-203ENST00000416957 SPHKAPQ2M3C7 1700 aa11.11□□□□□ -0.63
FNDC3B-203ENST00000416957 WASHC2CQ9Y4E1 1318 aa11.11□□□□□ -0.63
FNDC3B-203ENST00000416957 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
FNDC3B-203ENST00000416957 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
FNDC3B-203ENST00000416957 NPATQ14207 1427 aa11.11□□□□□ -0.63
FNDC3B-203ENST00000416957 PHF14O94880 888 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms