RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 MFRPQ9BY79 579 aa4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 GPR37O15354 613 aa4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 CENPBP07199 599 aaPredicted RBP4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 MS4A1P11836 297 aa4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 RFX1P22670 979 aa4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 ZEB1P37275 1124 aaPredicted RBP4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 TMEM259Q4ZIN3 620 aa4.28□□□□□ -1.72
CTDSPL-203ENST00000416688 NCKAP5LQ9HCH0 1330 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 GNPATO15228 680 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 RAB11FIP3O75154 756 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 PYGBP11216 843 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 IBSPP21815 317 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 ATN1P54259 1190 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 NLRP6P59044 892 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 PDAP1Q13442 181 aaKnown RBP4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 GIPC2Q8TF65 315 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 UBA5Q9GZZ9 404 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 GDPD2Q9HCC8 539 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 SUGT1Q9Y2Z0 365 aa4.27□□□□□ -1.73
CTDSPL-203ENST00000416688 NUTM2FA1L443 756 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 POTEJP0CG39 1038 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 IGBP1P78318 339 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 HIC1Q14526 733 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 RALBP1Q15311 655 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 SPTY2D1Q68D10 685 aaPredicted RBP4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 GIMAP6Q6P9H5 292 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 DNAJC14Q6Y2X3 702 aaPredicted RBP4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 DPH6Q7L8W6 267 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 GPATCH11Q8N954 259 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 OXER1Q8TDS5 423 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 OTUD5Q96G74 571 aa4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 BMP2KQ9NSY1 1161 aaPredicted RBP4.26□□□□□ -1.73
CTDSPL-203ENST00000416688 hCG_2014768A0A024R1R8 64 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 POTEFA5A3E0 1075 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 SOCS7O14512 581 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 EIF3JO75822 258 aaKnown RBP4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 PPP1R37O75864 691 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 ABL2P42684 1182 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 MARSP56192 900 aaKnown RBP4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 PPARGC1BQ86YN6 1023 aaKnown RBP4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 SMC5Q8IY18 1101 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 CCDC136Q96JN2 1154 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 DNAJC2Q99543 621 aaKnown RBP4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 SNRKQ9NRH2 765 aa4.25□□□□□ -1.73
CTDSPL-203ENST00000416688 FCHSD2O94868 740 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 ATG7O95352 703 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 C7P10643 843 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 CLCN1P35523 988 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 TIE1P35590 1138 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 SRPK2P78362 688 aaKnown RBP4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 HSP90AB2PQ58FF8 381 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 HDGFL1Q5TGJ6 251 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 PROCA1Q8NCQ7 364 aaPredicted RBP4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 CRISPLD2Q9H0B8 497 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 CUEDC1Q9NWM3 386 aaPredicted RBP4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 METRNQ9UJH8 293 aa4.24□□□□□ -1.73
CTDSPL-203ENST00000416688 TLDC2A0PJX2 215 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 CARNS1A5YM72 827 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 TMEM88BA6NKF7 163 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 TTLL13PA6NNM8 815 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 POM121CA8CG34 1229 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 MCCP23508 829 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 RFC5P40937 340 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 FOSBP53539 338 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 CFAP70Q5T0N1 1121 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 ZNF662Q6ZS27 426 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 IFNL1Q8IU54 200 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 ZCRB1Q8TBF4 217 aaKnown RBP4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 SLC39A7Q92504 469 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 TBC1D2Q9BYX2 928 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 PPP1R12CQ9BZL4 782 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 POLR3EQ9NVU0 708 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 TERF2IPQ9NYB0 399 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 LAS1LQ9Y4W2 734 aaKnown RBP4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 PCDHB13Q9Y5F0 798 aa4.23□□□□□ -1.73
CTDSPL-203ENST00000416688 ERCC5P28715 1186 aaPredicted RBP4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 ARID4AP29374 1257 aaPredicted RBP4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 PDIA6Q15084 440 aa4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 WASHC4Q2M389 1173 aa4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 CCAR1Q8IX12 1150 aaKnown RBP4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 RBM46Q8TBY0 533 aaKnown RBP4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 CDCA7Q9BWT1 371 aaPredicted RBP4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 PCGF6Q9BYE7 350 aa4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 SBNO2Q9Y2G9 1366 aa4.22□□□□□ -1.73
CTDSPL-203ENST00000416688 DIXDC1Q155Q3 683 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 PTPROQ16827 1216 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 APBB1IPQ7Z5R6 666 aaPredicted RBP4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 FBXO22Q8NEZ5 403 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 TANGO6Q9C0B7 1094 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 GPCPD1Q9NPB8 672 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 PRDM10Q9NQV6 1147 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 SLC52A1Q9NWF4 448 aa4.21□□□□□ -1.74
CTDSPL-203ENST00000416688 PEX14O75381 377 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 NEFMP07197 916 aa4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 LMOD1P29536 600 aaPredicted RBP4.2□□□□□ -1.74
CTDSPL-203ENST00000416688 SSTR3P32745 418 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms