RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 ADGRL2O95490 1459 aa14.67□□□□□ -0.06
SCN4B-202ENST00000415030 HSP90AB1P08238 724 aaKnown RBP14.67□□□□□ -0.06
SCN4B-202ENST00000415030 UBE2Q2Q8WVN8 375 aa14.67□□□□□ -0.06
SCN4B-202ENST00000415030 GPATCH8Q9UKJ3 1502 aaKnown RBP14.67□□□□□ -0.06
SCN4B-202ENST00000415030 MORC1Q86VD1 984 aa14.67□□□□□ -0.06
SCN4B-202ENST00000415030 CHMP5Q9NZZ3 219 aa14.67□□□□□ -0.06
SCN4B-202ENST00000415030 ITSN2Q9NZM3 1697 aa14.67□□□□□ -0.06
SCN4B-202ENST00000415030 KDM5CP41229 1560 aa14.67□□□□□ -0.06
SCN4B-202ENST00000415030 C8orf34Q49A92 452 aa14.66□□□□□ -0.06
SCN4B-202ENST00000415030 SPRYD3Q8NCJ5 442 aa14.66□□□□□ -0.06
SCN4B-202ENST00000415030 MBD5Q9P267 1494 aa14.66□□□□□ -0.06
SCN4B-202ENST00000415030 KIF3BO15066 747 aa14.66□□□□□ -0.06
SCN4B-202ENST00000415030 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
SCN4B-202ENST00000415030 LMOD2Q6P5Q4 547 aa14.65□□□□□ -0.06
SCN4B-202ENST00000415030 KDM2BQ8NHM5 1336 aa14.65□□□□□ -0.06
SCN4B-202ENST00000415030 NUP153P49790 1475 aaKnown RBP14.65□□□□□ -0.06
SCN4B-202ENST00000415030 MRC2Q9UBG0 1479 aa14.65□□□□□ -0.06
SCN4B-202ENST00000415030 KANK1Q14678 1352 aa14.64□□□□□ -0.07
SCN4B-202ENST00000415030 PER1O15534 1290 aaPredicted RBP14.64□□□□□ -0.07
SCN4B-202ENST00000415030 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
SCN4B-202ENST00000415030 HSP90AA2PQ14568 343 aaPredicted RBP14.63□□□□□ -0.07
SCN4B-202ENST00000415030 BLMP54132 1417 aaPredicted RBP14.63□□□□□ -0.07
SCN4B-202ENST00000415030 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
SCN4B-202ENST00000415030 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
SCN4B-202ENST00000415030 MRE11P49959 708 aa14.62□□□□□ -0.07
SCN4B-202ENST00000415030 SPAG9O60271 1321 aaKnown RBP14.62□□□□□ -0.07
SCN4B-202ENST00000415030 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
SCN4B-202ENST00000415030 POGKQ9P215 609 aa14.62□□□□□ -0.07
SCN4B-202ENST00000415030 PRAG1Q86YV5 1406 aa14.61□□□□□ -0.07
SCN4B-202ENST00000415030 ISY1Q9ULR0 285 aaKnown RBP14.61□□□□□ -0.07
SCN4B-202ENST00000415030 ZMYM4Q5VZL5 1548 aa14.61□□□□□ -0.07
SCN4B-202ENST00000415030 BCAR3O75815 825 aa14.61□□□□□ -0.07
SCN4B-202ENST00000415030 IFT140Q96RY7 1462 aa14.61□□□□□ -0.07
SCN4B-202ENST00000415030 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
SCN4B-202ENST00000415030 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
SCN4B-202ENST00000415030 SKOR2Q2VWA4 1001 aaPredicted RBP14.6□□□□□ -0.07
SCN4B-202ENST00000415030 PANK1Q8TE04 598 aa14.6□□□□□ -0.07
SCN4B-202ENST00000415030 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
SCN4B-202ENST00000415030 DISP3Q9P2K9 1392 aa14.59□□□□□ -0.07
SCN4B-202ENST00000415030 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
SCN4B-202ENST00000415030 IPO8O15397 1037 aaKnown RBP14.59□□□□□ -0.07
SCN4B-202ENST00000415030 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
SCN4B-202ENST00000415030 COL17A1Q9UMD9 1497 aaPredicted RBP14.58□□□□□ -0.08
SCN4B-202ENST00000415030 ZKSCAN2Q63HK3 967 aa14.58□□□□□ -0.08
SCN4B-202ENST00000415030 CCDC141Q6ZP82 1450 aa14.58□□□□□ -0.08
SCN4B-202ENST00000415030 MSNP26038 577 aaKnown RBP14.58□□□□□ -0.08
SCN4B-202ENST00000415030 NUP160Q12769 1436 aa14.57□□□□□ -0.08
SCN4B-202ENST00000415030 RUNDC1Q96C34 613 aa14.57□□□□□ -0.08
SCN4B-202ENST00000415030 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
SCN4B-202ENST00000415030 ADGBQ8N7X0 1667 aa14.57□□□□□ -0.08
SCN4B-202ENST00000415030 BCORL1Q5H9F3 1711 aa14.57□□□□□ -0.08
SCN4B-202ENST00000415030 MAGI1Q96QZ7 1491 aaPredicted RBP14.57□□□□□ -0.08
SCN4B-202ENST00000415030 ADAMTS12P58397 1594 aa14.57□□□□□ -0.08
SCN4B-202ENST00000415030 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 TRAK2O60296 914 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
SCN4B-202ENST00000415030 MCM4P33991 863 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 ITPRIPQ8IWB1 547 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 TESK2Q96S53 571 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 PDZRN3Q9UPQ7 1066 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 PLB1Q6P1J6 1458 aa14.56□□□□□ -0.08
SCN4B-202ENST00000415030 SMC4Q9NTJ3 1288 aa14.55□□□□□ -0.08
SCN4B-202ENST00000415030 SYNJ2O15056 1496 aa14.55□□□□□ -0.08
SCN4B-202ENST00000415030 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
SCN4B-202ENST00000415030 U2AF1L5P0DN76 240 aaPredicted RBP14.54□□□□□ -0.08
SCN4B-202ENST00000415030 U2AF1Q01081 240 aaKnown RBP eCLIP14.54□□□□□ -0.08
SCN4B-202ENST00000415030 PLEKHH1Q9ULM0 1364 aa14.54□□□□□ -0.08
SCN4B-202ENST00000415030 DDX19BQ9UMR2 479 aa14.53□□□□□ -0.08
SCN4B-202ENST00000415030 NCLP19338 710 aaKnown RBP14.53□□□□□ -0.08
SCN4B-202ENST00000415030 DZIP1LQ8IYY4 767 aaKnown RBP14.53□□□□□ -0.08
SCN4B-202ENST00000415030 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
SCN4B-202ENST00000415030 LRRIQ1Q96JM4 1722 aa14.53□□□□□ -0.08
SCN4B-202ENST00000415030 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
SCN4B-202ENST00000415030 EIF2AK4Q9P2K8 1649 aaKnown RBP14.52□□□□□ -0.08
SCN4B-202ENST00000415030 SAFB2Q14151 953 aaKnown RBP eCLIP14.52□□□□□ -0.08
SCN4B-202ENST00000415030 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.09
SCN4B-202ENST00000415030 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
SCN4B-202ENST00000415030 PIK3C2GO75747 1445 aa14.51□□□□□ -0.09
SCN4B-202ENST00000415030 U2SURPO15042 1029 aaKnown RBP14.51□□□□□ -0.09
SCN4B-202ENST00000415030 CASC1Q6TDU7 716 aa14.51□□□□□ -0.09
SCN4B-202ENST00000415030 VSIG10Q8N0Z9 540 aa14.51□□□□□ -0.09
SCN4B-202ENST00000415030 IGHDP01880 384 aa14.51□□□□□ -0.09
SCN4B-202ENST00000415030 TBC1D32Q96NH3 1257 aa14.51□□□□□ -0.09
SCN4B-202ENST00000415030 FAM135AQ9P2D6 1515 aa14.5□□□□□ -0.09
SCN4B-202ENST00000415030 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
SCN4B-202ENST00000415030 TBC1D2Q9BYX2 928 aa14.5□□□□□ -0.09
SCN4B-202ENST00000415030 RRP9O43818 475 aaKnown RBP14.5□□□□□ -0.09
SCN4B-202ENST00000415030 STK26Q9P289 416 aa14.5□□□□□ -0.09
SCN4B-202ENST00000415030 WWC1Q8IX03 1113 aa14.49□□□□□ -0.09
SCN4B-202ENST00000415030 DISP1Q96F81 1524 aa14.49□□□□□ -0.09
SCN4B-202ENST00000415030 CT47B1P0C2W7 299 aaPredicted RBP14.49□□□□□ -0.09
SCN4B-202ENST00000415030 TCP11L2Q8N4U5 519 aa14.48□□□□□ -0.09
SCN4B-202ENST00000415030 ASXL1Q8IXJ9 1541 aa14.48□□□□□ -0.09
SCN4B-202ENST00000415030 GRPEL1Q9HAV7 217 aa14.48□□□□□ -0.09
SCN4B-202ENST00000415030 CIZ1Q9ULV3 898 aaPredicted RBP14.47□□□□□ -0.09
SCN4B-202ENST00000415030 ARHGAP5Q13017 1502 aa14.47□□□□□ -0.09
SCN4B-202ENST00000415030 TPM2P07951 284 aa14.47□□□□□ -0.09
SCN4B-202ENST00000415030 CLCN1P35523 988 aa14.47□□□□□ -0.09
SCN4B-202ENST00000415030 NPC1L1Q9UHC9 1359 aa14.46□□□□□ -0.09
SCN4B-202ENST00000415030 SCAF11Q99590 1463 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms