RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
NUB1-201ENST00000413040 NUTM2DQ5VT03 806 aaPredicted RBP18.14■□□□□ 0.49
NUB1-201ENST00000413040 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
NUB1-201ENST00000413040 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
NUB1-201ENST00000413040 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
NUB1-201ENST00000413040 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
NUB1-201ENST00000413040 EIF3AQ14152 1382 aaKnown RBP18.13■□□□□ 0.49
NUB1-201ENST00000413040 BLMP54132 1417 aaPredicted RBP18.12■□□□□ 0.49
NUB1-201ENST00000413040 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
NUB1-201ENST00000413040 DUSP27Q5VZP5 1158 aa18.11■□□□□ 0.49
NUB1-201ENST00000413040 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
NUB1-201ENST00000413040 DEKP35659 375 aaKnown RBP18.1■□□□□ 0.49
NUB1-201ENST00000413040 TMEM132EQ6IEE7 984 aa18.1■□□□□ 0.49
NUB1-201ENST00000413040 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
NUB1-201ENST00000413040 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
NUB1-201ENST00000413040 UGGT1Q9NYU2 1555 aa18.09■□□□□ 0.49
NUB1-201ENST00000413040 RTEL1-TNFRSF6BF6WH68 1400 aa18.09■□□□□ 0.49
NUB1-201ENST00000413040 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.49
NUB1-201ENST00000413040 BACH2Q9BYV9 841 aa18.08■□□□□ 0.48
NUB1-201ENST00000413040 RGS3P49796 1198 aa18.07■□□□□ 0.48
NUB1-201ENST00000413040 LAMC1P11047 1609 aa18.07■□□□□ 0.48
NUB1-201ENST00000413040 ZFYVE16Q7Z3T8 1539 aa18.07■□□□□ 0.48
NUB1-201ENST00000413040 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
NUB1-201ENST00000413040 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
NUB1-201ENST00000413040 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
NUB1-201ENST00000413040 CLTCL1P53675 1640 aa18.06■□□□□ 0.48
NUB1-201ENST00000413040 PRKCSHP14314 528 aaPredicted RBP18.06■□□□□ 0.48
NUB1-201ENST00000413040 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
NUB1-201ENST00000413040 MADDQ8WXG6 1647 aa18.06■□□□□ 0.48
NUB1-201ENST00000413040 TRPM2O94759 1503 aa18.06■□□□□ 0.48
NUB1-201ENST00000413040 CFAP65Q6ZU64 1925 aaKnown RBP18.05■□□□□ 0.48
NUB1-201ENST00000413040 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
NUB1-201ENST00000413040 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
NUB1-201ENST00000413040 PTPRTO14522 1441 aa18.05■□□□□ 0.48
NUB1-201ENST00000413040 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
NUB1-201ENST00000413040 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
NUB1-201ENST00000413040 ZMYM4Q5VZL5 1548 aa18.04■□□□□ 0.48
NUB1-201ENST00000413040 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
NUB1-201ENST00000413040 BCAR3O75815 825 aa18.04■□□□□ 0.48
NUB1-201ENST00000413040 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
NUB1-201ENST00000413040 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
NUB1-201ENST00000413040 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
NUB1-201ENST00000413040 MS4A1P11836 297 aa18.03■□□□□ 0.48
NUB1-201ENST00000413040 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
NUB1-201ENST00000413040 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
NUB1-201ENST00000413040 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
NUB1-201ENST00000413040 ASXL2Q76L83 1435 aa18.01■□□□□ 0.47
NUB1-201ENST00000413040 RNF17Q9BXT8 1623 aaKnown RBP18■□□□□ 0.47
NUB1-201ENST00000413040 NOS1P29475 1434 aa18■□□□□ 0.47
NUB1-201ENST00000413040 SLC24A1O60721 1099 aa18■□□□□ 0.47
NUB1-201ENST00000413040 FRAT1Q92837 279 aaPredicted RBP18■□□□□ 0.47
NUB1-201ENST00000413040 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
NUB1-201ENST00000413040 INSRP06213 1382 aa17.98■□□□□ 0.47
NUB1-201ENST00000413040 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
NUB1-201ENST00000413040 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
NUB1-201ENST00000413040 IQGAP1P46940 1657 aa17.97■□□□□ 0.47
NUB1-201ENST00000413040 CENPQQ7L2Z9 268 aaPredicted RBP17.97■□□□□ 0.47
NUB1-201ENST00000413040 STK26Q9P289 416 aa17.97■□□□□ 0.47
NUB1-201ENST00000413040 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
NUB1-201ENST00000413040 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
NUB1-201ENST00000413040 E9PSI1 815 aa17.96■□□□□ 0.47
NUB1-201ENST00000413040 TET3O43151 1660 aa17.96■□□□□ 0.47
NUB1-201ENST00000413040 ERVK-7P63135 1459 aa17.95■□□□□ 0.46
NUB1-201ENST00000413040 CEP152O94986 1710 aa17.95■□□□□ 0.46
NUB1-201ENST00000413040 SYNMO15061 1565 aa17.95■□□□□ 0.46
NUB1-201ENST00000413040 NEFMP07197 916 aa17.95■□□□□ 0.46
NUB1-201ENST00000413040 BCL2L13Q9BXK5 485 aa17.94■□□□□ 0.46
NUB1-201ENST00000413040 NSD3Q9BZ95 1437 aa17.94■□□□□ 0.46
NUB1-201ENST00000413040 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
NUB1-201ENST00000413040 MTHFSP49914 203 aa17.93■□□□□ 0.46
NUB1-201ENST00000413040 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
NUB1-201ENST00000413040 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
NUB1-201ENST00000413040 NPC1L1Q9UHC9 1359 aa17.91■□□□□ 0.46
NUB1-201ENST00000413040 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
NUB1-201ENST00000413040 ARAP3Q8WWN8 1544 aa17.91■□□□□ 0.46
NUB1-201ENST00000413040 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
NUB1-201ENST00000413040 KDM5AP29375 1690 aaKnown RBP17.91■□□□□ 0.46
NUB1-201ENST00000413040 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
NUB1-201ENST00000413040 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
NUB1-201ENST00000413040 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
NUB1-201ENST00000413040 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
NUB1-201ENST00000413040 CD109Q6YHK3 1445 aa17.9■□□□□ 0.46
NUB1-201ENST00000413040 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.46
NUB1-201ENST00000413040 INO80Q9ULG1 1556 aaPredicted RBP17.89■□□□□ 0.45
NUB1-201ENST00000413040 NKTRP30414 1462 aaKnown RBP17.89■□□□□ 0.45
NUB1-201ENST00000413040 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
NUB1-201ENST00000413040 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.45
NUB1-201ENST00000413040 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
NUB1-201ENST00000413040 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
NUB1-201ENST00000413040 OSCARQ8IYS5 282 aa17.88■□□□□ 0.45
NUB1-201ENST00000413040 DDRGK1Q96HY6 314 aa17.88■□□□□ 0.45
NUB1-201ENST00000413040 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
NUB1-201ENST00000413040 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
NUB1-201ENST00000413040 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
NUB1-201ENST00000413040 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
NUB1-201ENST00000413040 NPATQ14207 1427 aa17.87■□□□□ 0.45
NUB1-201ENST00000413040 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
NUB1-201ENST00000413040 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
NUB1-201ENST00000413040 KIF1BO60333 1816 aa17.87■□□□□ 0.45
NUB1-201ENST00000413040 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms