RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
LINC00476-202ENST00000412446 KDM5DQ9BY66 1539 aa13.04□□□□□ -0.32
LINC00476-202ENST00000412446 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
LINC00476-202ENST00000412446 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00476-202ENST00000412446 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
LINC00476-202ENST00000412446 AFF2P51816 1311 aa13.03□□□□□ -0.32
LINC00476-202ENST00000412446 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
LINC00476-202ENST00000412446 CAMSAP2Q08AD1 1489 aa13.03□□□□□ -0.32
LINC00476-202ENST00000412446 TNRQ92752 1358 aa13.02□□□□□ -0.33
LINC00476-202ENST00000412446 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
LINC00476-202ENST00000412446 ABCB7O75027 752 aa13.01□□□□□ -0.33
LINC00476-202ENST00000412446 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
LINC00476-202ENST00000412446 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
LINC00476-202ENST00000412446 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
LINC00476-202ENST00000412446 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
LINC00476-202ENST00000412446 MIA2Q96PC5 1412 aa13□□□□□ -0.33
LINC00476-202ENST00000412446 THEMISQ8N1K5 641 aaPredicted RBP13□□□□□ -0.33
LINC00476-202ENST00000412446 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
LINC00476-202ENST00000412446 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
LINC00476-202ENST00000412446 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
LINC00476-202ENST00000412446 EIF2AK4Q9P2K8 1649 aaKnown RBP12.97□□□□□ -0.33
LINC00476-202ENST00000412446 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
LINC00476-202ENST00000412446 NWD1Q149M9 1564 aa12.96□□□□□ -0.33
LINC00476-202ENST00000412446 TSPY4P0CV99 314 aa12.96□□□□□ -0.33
LINC00476-202ENST00000412446 TSPY10P0CW01 314 aa12.96□□□□□ -0.33
LINC00476-202ENST00000412446 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
LINC00476-202ENST00000412446 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
LINC00476-202ENST00000412446 UTRNP46939 3433 aa12.95□□□□□ -0.34
LINC00476-202ENST00000412446 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
LINC00476-202ENST00000412446 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
LINC00476-202ENST00000412446 PZPP20742 1482 aa12.94□□□□□ -0.34
LINC00476-202ENST00000412446 NLRP1Q9C000 1473 aa12.94□□□□□ -0.34
LINC00476-202ENST00000412446 HRCP23327 699 aa12.94□□□□□ -0.34
LINC00476-202ENST00000412446 GGT6Q6P531 493 aa12.94□□□□□ -0.34
LINC00476-202ENST00000412446 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
LINC00476-202ENST00000412446 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
LINC00476-202ENST00000412446 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
LINC00476-202ENST00000412446 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
LINC00476-202ENST00000412446 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
LINC00476-202ENST00000412446 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
LINC00476-202ENST00000412446 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
LINC00476-202ENST00000412446 PSDA5PKW4 1024 aaPredicted RBP12.89□□□□□ -0.35
LINC00476-202ENST00000412446 KIF3BO15066 747 aa12.89□□□□□ -0.35
LINC00476-202ENST00000412446 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
LINC00476-202ENST00000412446 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
LINC00476-202ENST00000412446 DEFB132Q7Z7B7 95 aa12.88□□□□□ -0.35
LINC00476-202ENST00000412446 BCANQ96GW7 911 aa12.88□□□□□ -0.35
LINC00476-202ENST00000412446 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
LINC00476-202ENST00000412446 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
LINC00476-202ENST00000412446 CROCC2H7BZ55 1655 aa12.87□□□□□ -0.35
LINC00476-202ENST00000412446 SCAF11Q99590 1463 aaKnown RBP12.86□□□□□ -0.35
LINC00476-202ENST00000412446 SLC34A2O95436 690 aa12.86□□□□□ -0.35
LINC00476-202ENST00000412446 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
LINC00476-202ENST00000412446 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
LINC00476-202ENST00000412446 ABCC3O15438 1527 aa12.85□□□□□ -0.35
LINC00476-202ENST00000412446 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
LINC00476-202ENST00000412446 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
LINC00476-202ENST00000412446 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
LINC00476-202ENST00000412446 NGLY1Q96IV0 654 aa12.85□□□□□ -0.35
LINC00476-202ENST00000412446 LTKP29376 864 aa12.84□□□□□ -0.35
LINC00476-202ENST00000412446 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
LINC00476-202ENST00000412446 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
LINC00476-202ENST00000412446 ARHGAP31Q2M1Z3 1444 aa12.83□□□□□ -0.36
LINC00476-202ENST00000412446 LOC105371045A0A1W2PR82 267 aa12.83□□□□□ -0.36
LINC00476-202ENST00000412446 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
LINC00476-202ENST00000412446 KDM5AP29375 1690 aaKnown RBP12.83□□□□□ -0.36
LINC00476-202ENST00000412446 UBR1Q8IWV7 1749 aa12.82□□□□□ -0.36
LINC00476-202ENST00000412446 MROH1Q8NDA8 1641 aa12.82□□□□□ -0.36
LINC00476-202ENST00000412446 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
LINC00476-202ENST00000412446 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
LINC00476-202ENST00000412446 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
LINC00476-202ENST00000412446 KANK4Q5T7N3 995 aaPredicted RBP12.81□□□□□ -0.36
LINC00476-202ENST00000412446 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
LINC00476-202ENST00000412446 MSH6P52701 1360 aa12.81□□□□□ -0.36
LINC00476-202ENST00000412446 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
LINC00476-202ENST00000412446 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
LINC00476-202ENST00000412446 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
LINC00476-202ENST00000412446 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
LINC00476-202ENST00000412446 KCNA6P17658 529 aa12.8□□□□□ -0.36
LINC00476-202ENST00000412446 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
LINC00476-202ENST00000412446 ABCC5O15440 1437 aa12.79□□□□□ -0.36
LINC00476-202ENST00000412446 DAPK1P53355 1430 aa12.79□□□□□ -0.36
LINC00476-202ENST00000412446 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
LINC00476-202ENST00000412446 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
LINC00476-202ENST00000412446 SLIT1O75093 1534 aa12.78□□□□□ -0.36
LINC00476-202ENST00000412446 LMTK2Q8IWU2 1503 aa12.78□□□□□ -0.36
LINC00476-202ENST00000412446 DSG3P32926 999 aa12.78□□□□□ -0.36
LINC00476-202ENST00000412446 KANK1Q14678 1352 aa12.78□□□□□ -0.36
LINC00476-202ENST00000412446 RGL2O15211 777 aa12.77□□□□□ -0.37
LINC00476-202ENST00000412446 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
LINC00476-202ENST00000412446 KDM2AQ9Y2K7 1162 aa12.77□□□□□ -0.37
LINC00476-202ENST00000412446 ADGRL2O95490 1459 aa12.77□□□□□ -0.37
LINC00476-202ENST00000412446 NKTRP30414 1462 aaKnown RBP12.77□□□□□ -0.37
LINC00476-202ENST00000412446 CEP152O94986 1710 aa12.76□□□□□ -0.37
LINC00476-202ENST00000412446 ATRNO75882 1429 aa12.76□□□□□ -0.37
LINC00476-202ENST00000412446 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
LINC00476-202ENST00000412446 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
LINC00476-202ENST00000412446 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
LINC00476-202ENST00000412446 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
LINC00476-202ENST00000412446 RPRD2Q5VT52 1461 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms