RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 ABCC1P33527 1531 aa21.89■■□□□ 1.09
PDK1-203ENST00000410055 SKAP1Q86WV1 359 aa21.89■■□□□ 1.09
PDK1-203ENST00000410055 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.09
PDK1-203ENST00000410055 PPP2R1AP30153 589 aa21.88■■□□□ 1.09
PDK1-203ENST00000410055 PDE3BQ13370 1112 aa21.88■■□□□ 1.09
PDK1-203ENST00000410055 KANK1Q14678 1352 aa21.88■■□□□ 1.09
PDK1-203ENST00000410055 GGT6Q6P531 493 aa21.85■■□□□ 1.09
PDK1-203ENST00000410055 FANCAO15360 1455 aa21.84■■□□□ 1.09
PDK1-203ENST00000410055 ATP10AO60312 1499 aa21.84■■□□□ 1.09
PDK1-203ENST00000410055 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
PDK1-203ENST00000410055 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
PDK1-203ENST00000410055 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
PDK1-203ENST00000410055 ADGRF5Q8IZF2 1346 aa21.83■■□□□ 1.09
PDK1-203ENST00000410055 CRBNQ96SW2 442 aa21.83■■□□□ 1.09
PDK1-203ENST00000410055 TNNT2P45379 298 aaPredicted RBP21.82■■□□□ 1.08
PDK1-203ENST00000410055 AMER1Q5JTC6 1135 aaPredicted RBP21.82■■□□□ 1.08
PDK1-203ENST00000410055 C20orf194Q5TEA3 1177 aa21.81■■□□□ 1.08
PDK1-203ENST00000410055 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
PDK1-203ENST00000410055 UGGT1Q9NYU2 1555 aa21.79■■□□□ 1.08
PDK1-203ENST00000410055 ADGRL1O94910 1474 aa21.78■■□□□ 1.08
PDK1-203ENST00000410055 WDR7Q9Y4E6 1490 aa21.78■■□□□ 1.08
PDK1-203ENST00000410055 NPM1P06748 294 aaKnown RBP eCLIP21.78■■□□□ 1.08
PDK1-203ENST00000410055 GSE1Q14687 1217 aa21.78■■□□□ 1.08
PDK1-203ENST00000410055 TRAK1Q9UPV9 953 aa21.78■■□□□ 1.08
PDK1-203ENST00000410055 UHRF1BP1LA0JNW5 1464 aa21.77■■□□□ 1.08
PDK1-203ENST00000410055 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
PDK1-203ENST00000410055 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
PDK1-203ENST00000410055 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
PDK1-203ENST00000410055 CFAP65Q6ZU64 1925 aaKnown RBP21.76■■□□□ 1.07
PDK1-203ENST00000410055 CLTCL1P53675 1640 aa21.75■■□□□ 1.07
PDK1-203ENST00000410055 RTEL1-TNFRSF6BF6WH68 1400 aa21.75■■□□□ 1.07
PDK1-203ENST00000410055 APAF1O14727 1248 aa21.75■■□□□ 1.07
PDK1-203ENST00000410055 TMEM132EQ6IEE7 984 aa21.75■■□□□ 1.07
PDK1-203ENST00000410055 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
PDK1-203ENST00000410055 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
PDK1-203ENST00000410055 MADDQ8WXG6 1647 aa21.74■■□□□ 1.07
PDK1-203ENST00000410055 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
PDK1-203ENST00000410055 FRAT1Q92837 279 aaPredicted RBP21.73■■□□□ 1.07
PDK1-203ENST00000410055 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
PDK1-203ENST00000410055 EIF3AQ14152 1382 aaKnown RBP21.73■■□□□ 1.07
PDK1-203ENST00000410055 GOLGA2Q08379 1002 aa21.72■■□□□ 1.07
PDK1-203ENST00000410055 BLMP54132 1417 aaPredicted RBP21.72■■□□□ 1.07
PDK1-203ENST00000410055 TRPM2O94759 1503 aa21.72■■□□□ 1.07
PDK1-203ENST00000410055 LAMC1P11047 1609 aa21.72■■□□□ 1.07
PDK1-203ENST00000410055 ASXL2Q76L83 1435 aa21.7■■□□□ 1.06
PDK1-203ENST00000410055 PDE4AP27815 886 aa21.7■■□□□ 1.06
PDK1-203ENST00000410055 PTPRTO14522 1441 aa21.7■■□□□ 1.06
PDK1-203ENST00000410055 CARD14Q9BXL6 1004 aa21.7■■□□□ 1.06
PDK1-203ENST00000410055 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
PDK1-203ENST00000410055 DUSP27Q5VZP5 1158 aa21.69■■□□□ 1.06
PDK1-203ENST00000410055 SAFB2Q14151 953 aaKnown RBP eCLIP21.69■■□□□ 1.06
PDK1-203ENST00000410055 TCERG1O14776 1098 aaKnown RBP21.68■■□□□ 1.06
PDK1-203ENST00000410055 SPINK5Q9NQ38 1064 aaPredicted RBP21.67■■□□□ 1.06
PDK1-203ENST00000410055 RNF17Q9BXT8 1623 aaKnown RBP21.67■■□□□ 1.06
PDK1-203ENST00000410055 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
PDK1-203ENST00000410055 SLC12A5Q9H2X9 1139 aa21.66■■□□□ 1.06
PDK1-203ENST00000410055 RBM10P98175 930 aaKnown RBP21.65■■□□□ 1.06
PDK1-203ENST00000410055 FAM43AQ8N2R8 423 aa21.65■■□□□ 1.06
PDK1-203ENST00000410055 HSP90AA2PQ14568 343 aaPredicted RBP21.64■■□□□ 1.06
PDK1-203ENST00000410055 ASXL1Q8IXJ9 1541 aa21.64■■□□□ 1.06
PDK1-203ENST00000410055 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
PDK1-203ENST00000410055 NOS1P29475 1434 aa21.63■■□□□ 1.05
PDK1-203ENST00000410055 RRP7AQ9Y3A4 280 aaKnown RBP21.63■■□□□ 1.05
PDK1-203ENST00000410055 ZMYM4Q5VZL5 1548 aa21.63■■□□□ 1.05
PDK1-203ENST00000410055 CEP152O94986 1710 aa21.63■■□□□ 1.05
PDK1-203ENST00000410055 IQGAP1P46940 1657 aa21.63■■□□□ 1.05
PDK1-203ENST00000410055 CENPJQ9HC77 1338 aaPredicted RBP21.62■■□□□ 1.05
PDK1-203ENST00000410055 TET3O43151 1660 aa21.62■■□□□ 1.05
PDK1-203ENST00000410055 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
PDK1-203ENST00000410055 BCAR3O75815 825 aa21.62■■□□□ 1.05
PDK1-203ENST00000410055 MORC1Q86VD1 984 aa21.61■■□□□ 1.05
PDK1-203ENST00000410055 DMRT2Q9Y5R5 561 aa21.61■■□□□ 1.05
PDK1-203ENST00000410055 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
PDK1-203ENST00000410055 BACH2Q9BYV9 841 aa21.6■■□□□ 1.05
PDK1-203ENST00000410055 RGS3P49796 1198 aa21.59■■□□□ 1.05
PDK1-203ENST00000410055 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.58■■□□□ 1.04
PDK1-203ENST00000410055 STK26Q9P289 416 aa21.58■■□□□ 1.04
PDK1-203ENST00000410055 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
PDK1-203ENST00000410055 INO80Q9ULG1 1556 aaPredicted RBP21.57■■□□□ 1.04
PDK1-203ENST00000410055 NAP1L5Q96NT1 182 aaPredicted RBP21.57■■□□□ 1.04
PDK1-203ENST00000410055 SYNMO15061 1565 aa21.56■■□□□ 1.04
PDK1-203ENST00000410055 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
PDK1-203ENST00000410055 ARAP3Q8WWN8 1544 aa21.56■■□□□ 1.04
PDK1-203ENST00000410055 ABCA9Q8IUA7 1624 aa21.56■■□□□ 1.04
PDK1-203ENST00000410055 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
PDK1-203ENST00000410055 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
PDK1-203ENST00000410055 CD109Q6YHK3 1445 aa21.55■■□□□ 1.04
PDK1-203ENST00000410055 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
PDK1-203ENST00000410055 NFKBIBQ15653 356 aa21.54■■□□□ 1.04
PDK1-203ENST00000410055 ABCA6Q8N139 1617 aa21.53■■□□□ 1.04
PDK1-203ENST00000410055 PIK3C2GO75747 1445 aa21.53■■□□□ 1.04
PDK1-203ENST00000410055 RRAGDQ9NQL2 400 aaPredicted RBP21.53■■□□□ 1.04
PDK1-203ENST00000410055 KDM5AP29375 1690 aaKnown RBP21.52■■□□□ 1.04
PDK1-203ENST00000410055 NSD3Q9BZ95 1437 aa21.52■■□□□ 1.04
PDK1-203ENST00000410055 AAMPQ13685 434 aa21.52■■□□□ 1.04
PDK1-203ENST00000410055 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
PDK1-203ENST00000410055 INSRP06213 1382 aa21.52■■□□□ 1.03
PDK1-203ENST00000410055 KIF1BO60333 1816 aa21.51■■□□□ 1.03
PDK1-203ENST00000410055 ZNF518AQ6AHZ1 1483 aa21.51■■□□□ 1.03
PDK1-203ENST00000410055 MS4A1P11836 297 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms