RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 NCOA1Q15788 1441 aa14.38□□□□□ -0.11
NIF3L1-204ENST00000409357 IL27Q8NEV9 243 aa14.38□□□□□ -0.11
NIF3L1-204ENST00000409357 ADGRL2O95490 1459 aa14.38□□□□□ -0.11
NIF3L1-204ENST00000409357 NBR1Q14596 966 aa14.37□□□□□ -0.11
NIF3L1-204ENST00000409357 ANKRD30AQ9BXX3 1397 aa14.36□□□□□ -0.11
NIF3L1-204ENST00000409357 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
NIF3L1-204ENST00000409357 TNRQ92752 1358 aa14.34□□□□□ -0.11
NIF3L1-204ENST00000409357 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
NIF3L1-204ENST00000409357 A2ML1A8K2U0 1454 aa14.34□□□□□ -0.11
NIF3L1-204ENST00000409357 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.11
NIF3L1-204ENST00000409357 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.11
NIF3L1-204ENST00000409357 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.11
NIF3L1-204ENST00000409357 ZBED9Q6R2W3 1325 aa14.33□□□□□ -0.12
NIF3L1-204ENST00000409357 SPATA31D1Q6ZQQ2 1576 aa14.33□□□□□ -0.12
NIF3L1-204ENST00000409357 VWDEQ8N2E2 1590 aa14.32□□□□□ -0.12
NIF3L1-204ENST00000409357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
NIF3L1-204ENST00000409357 ERVK-7P63135 1459 aa14.32□□□□□ -0.12
NIF3L1-204ENST00000409357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.31□□□□□ -0.12
NIF3L1-204ENST00000409357 NCKAP5LQ9HCH0 1330 aa14.31□□□□□ -0.12
NIF3L1-204ENST00000409357 ANKRD50Q9ULJ7 1429 aa14.3□□□□□ -0.12
NIF3L1-204ENST00000409357 PLA2R1Q13018 1463 aa14.29□□□□□ -0.12
NIF3L1-204ENST00000409357 POLR1AO95602 1720 aaPredicted RBP14.29□□□□□ -0.12
NIF3L1-204ENST00000409357 PTPRTO14522 1441 aa14.28□□□□□ -0.12
NIF3L1-204ENST00000409357 NLRP1Q9C000 1473 aa14.28□□□□□ -0.12
NIF3L1-204ENST00000409357 NEURL4Q96JN8 1562 aa14.28□□□□□ -0.12
NIF3L1-204ENST00000409357 UGGT1Q9NYU2 1555 aa14.27□□□□□ -0.12
NIF3L1-204ENST00000409357 LMTK2Q8IWU2 1503 aa14.27□□□□□ -0.13
NIF3L1-204ENST00000409357 EFCAB6Q5THR3 1501 aa14.26□□□□□ -0.13
NIF3L1-204ENST00000409357 ARHGAP31Q2M1Z3 1444 aa14.26□□□□□ -0.13
NIF3L1-204ENST00000409357 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
NIF3L1-204ENST00000409357 UNC13BO14795 1591 aa14.26□□□□□ -0.13
NIF3L1-204ENST00000409357 UBR1Q8IWV7 1749 aa14.26□□□□□ -0.13
NIF3L1-204ENST00000409357 ROCK1Q13464 1354 aa14.25□□□□□ -0.13
NIF3L1-204ENST00000409357 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
NIF3L1-204ENST00000409357 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
NIF3L1-204ENST00000409357 SYNMO15061 1565 aa14.25□□□□□ -0.13
NIF3L1-204ENST00000409357 LTBP4Q8N2S1 1624 aa14.24□□□□□ -0.13
NIF3L1-204ENST00000409357 KANK1Q14678 1352 aa14.24□□□□□ -0.13
NIF3L1-204ENST00000409357 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
NIF3L1-204ENST00000409357 PIK3C2BO00750 1634 aa14.23□□□□□ -0.13
NIF3L1-204ENST00000409357 GLIPR1L2Q4G1C9 344 aa14.23□□□□□ -0.13
NIF3L1-204ENST00000409357 EIF5BO60841 1220 aaKnown RBP14.22□□□□□ -0.13
NIF3L1-204ENST00000409357 FAM43AQ8N2R8 423 aa14.22□□□□□ -0.13
NIF3L1-204ENST00000409357 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
NIF3L1-204ENST00000409357 TET3O43151 1660 aa14.22□□□□□ -0.13
NIF3L1-204ENST00000409357 ZNF335Q9H4Z2 1342 aaPredicted RBP14.21□□□□□ -0.13
NIF3L1-204ENST00000409357 GCC2Q8IWJ2 1684 aa14.21□□□□□ -0.14
NIF3L1-204ENST00000409357 MS4A1P11836 297 aa14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 PKD2Q13563 968 aa14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 FBXO41Q8TF61 875 aa14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 IQGAP3Q86VI3 1631 aa14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 E9PCH4 1651 aa14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 TCERG1O14776 1098 aaKnown RBP14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 SIN3AQ96ST3 1273 aa14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
NIF3L1-204ENST00000409357 GSE1Q14687 1217 aa14.19□□□□□ -0.14
NIF3L1-204ENST00000409357 NOS1P29475 1434 aa14.19□□□□□ -0.14
NIF3L1-204ENST00000409357 IQGAP1P46940 1657 aa14.18□□□□□ -0.14
NIF3L1-204ENST00000409357 NEFMP07197 916 aa14.18□□□□□ -0.14
NIF3L1-204ENST00000409357 THEMISQ8N1K5 641 aaPredicted RBP14.18□□□□□ -0.14
NIF3L1-204ENST00000409357 MYO5BQ9ULV0 1848 aa14.17□□□□□ -0.14
NIF3L1-204ENST00000409357 MED14O60244 1454 aa14.16□□□□□ -0.14
NIF3L1-204ENST00000409357 TONSLQ96HA7 1378 aa14.16□□□□□ -0.14
NIF3L1-204ENST00000409357 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 NAIPQ13075 1403 aa14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 SLIT1O75093 1534 aa14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
NIF3L1-204ENST00000409357 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.15
NIF3L1-204ENST00000409357 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
NIF3L1-204ENST00000409357 IDI1Q13907 227 aa14.14□□□□□ -0.15
NIF3L1-204ENST00000409357 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
NIF3L1-204ENST00000409357 NUP155O75694 1391 aa14.14□□□□□ -0.15
NIF3L1-204ENST00000409357 LTKP29376 864 aa14.14□□□□□ -0.15
NIF3L1-204ENST00000409357 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
NIF3L1-204ENST00000409357 SCAF11Q99590 1463 aaKnown RBP14.13□□□□□ -0.15
NIF3L1-204ENST00000409357 TMEM2Q9UHN6 1383 aa14.11□□□□□ -0.15
NIF3L1-204ENST00000409357 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
NIF3L1-204ENST00000409357 NUDCQ9Y266 331 aa14.1□□□□□ -0.15
NIF3L1-204ENST00000409357 TMEM131LA2VDJ0 1609 aa14.1□□□□□ -0.15
NIF3L1-204ENST00000409357 HFM1A2PYH4 1435 aa14.1□□□□□ -0.15
NIF3L1-204ENST00000409357 PRKRIP1Q9H875 184 aaPredicted RBP14.1□□□□□ -0.15
NIF3L1-204ENST00000409357 SPHKAPQ2M3C7 1700 aa14.09□□□□□ -0.15
NIF3L1-204ENST00000409357 BACH2Q9BYV9 841 aa14.08□□□□□ -0.16
NIF3L1-204ENST00000409357 TXNDC2Q86VQ3 553 aa14.07□□□□□ -0.16
NIF3L1-204ENST00000409357 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
NIF3L1-204ENST00000409357 IQSEC2Q5JU85 1478 aa14.07□□□□□ -0.16
NIF3L1-204ENST00000409357 SLC52A1Q9NWF4 448 aa14.07□□□□□ -0.16
NIF3L1-204ENST00000409357 BRPF3Q9ULD4 1205 aa14.07□□□□□ -0.16
NIF3L1-204ENST00000409357 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
NIF3L1-204ENST00000409357 CPS1P31327 1500 aa14.05□□□□□ -0.16
NIF3L1-204ENST00000409357 PDE4AP27815 886 aa14.04□□□□□ -0.16
NIF3L1-204ENST00000409357 CLTCL1P53675 1640 aa14.03□□□□□ -0.16
NIF3L1-204ENST00000409357 EID1Q9Y6B2 187 aa14.03□□□□□ -0.16
NIF3L1-204ENST00000409357 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
NIF3L1-204ENST00000409357 ALKQ9UM73 1620 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms