RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 CDCA8Q53HL2 280 aa18.12■□□□□ 0.49
PMS2-204ENST00000406569 MYOM2P54296 1465 aa18.12■□□□□ 0.49
PMS2-204ENST00000406569 KDM5AP29375 1690 aaKnown RBP18.12■□□□□ 0.49
PMS2-204ENST00000406569 TCERG1O14776 1098 aaKnown RBP18.12■□□□□ 0.49
PMS2-204ENST00000406569 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
PMS2-204ENST00000406569 CDCA7LQ96GN5 454 aa18.11■□□□□ 0.49
PMS2-204ENST00000406569 MAP3K4Q9Y6R4 1608 aa18.11■□□□□ 0.49
PMS2-204ENST00000406569 MS4A1P11836 297 aa18.09■□□□□ 0.49
PMS2-204ENST00000406569 IPO9Q96P70 1041 aaKnown RBP18.09■□□□□ 0.49
PMS2-204ENST00000406569 KANK1Q14678 1352 aa18.09■□□□□ 0.49
PMS2-204ENST00000406569 ANP32AP39687 249 aaKnown RBP18.09■□□□□ 0.49
PMS2-204ENST00000406569 KIF1BO60333 1816 aa18.08■□□□□ 0.49
PMS2-204ENST00000406569 MYO3AQ8NEV4 1616 aa18.08■□□□□ 0.49
PMS2-204ENST00000406569 EIF3AQ14152 1382 aaKnown RBP18.08■□□□□ 0.48
PMS2-204ENST00000406569 PPP2R1AP30153 589 aa18.08■□□□□ 0.48
PMS2-204ENST00000406569 ABCA6Q8N139 1617 aa18.08■□□□□ 0.48
PMS2-204ENST00000406569 FANCAO15360 1455 aa18.07■□□□□ 0.48
PMS2-204ENST00000406569 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
PMS2-204ENST00000406569 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
PMS2-204ENST00000406569 KNSTRNQ9Y448 316 aa18.07■□□□□ 0.48
PMS2-204ENST00000406569 ADAMTS8Q9UP79 889 aa18.06■□□□□ 0.48
PMS2-204ENST00000406569 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
PMS2-204ENST00000406569 EFCAB6Q5THR3 1501 aa18.06■□□□□ 0.48
PMS2-204ENST00000406569 LMTK2Q8IWU2 1503 aa18.06■□□□□ 0.48
PMS2-204ENST00000406569 NRXN1Q9ULB1 1477 aa18.05■□□□□ 0.48
PMS2-204ENST00000406569 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
PMS2-204ENST00000406569 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
PMS2-204ENST00000406569 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
PMS2-204ENST00000406569 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
PMS2-204ENST00000406569 ADGRL1O94910 1474 aa18.02■□□□□ 0.47
PMS2-204ENST00000406569 SBNO2Q9Y2G9 1366 aa18.01■□□□□ 0.47
PMS2-204ENST00000406569 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
PMS2-204ENST00000406569 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
PMS2-204ENST00000406569 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
PMS2-204ENST00000406569 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
PMS2-204ENST00000406569 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
PMS2-204ENST00000406569 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
PMS2-204ENST00000406569 BCL11AQ9H165 835 aa18■□□□□ 0.47
PMS2-204ENST00000406569 PDE4AP27815 886 aa17.99■□□□□ 0.47
PMS2-204ENST00000406569 CRBNQ96SW2 442 aa17.99■□□□□ 0.47
PMS2-204ENST00000406569 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
PMS2-204ENST00000406569 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
PMS2-204ENST00000406569 TRMT2AQ8IZ69 625 aaKnown RBP17.98■□□□□ 0.47
PMS2-204ENST00000406569 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
PMS2-204ENST00000406569 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
PMS2-204ENST00000406569 PLIN1O60240 522 aa17.96■□□□□ 0.47
PMS2-204ENST00000406569 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.47
PMS2-204ENST00000406569 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.47
PMS2-204ENST00000406569 KIF3BO15066 747 aa17.95■□□□□ 0.46
PMS2-204ENST00000406569 GOLGA2Q08379 1002 aa17.95■□□□□ 0.46
PMS2-204ENST00000406569 NGEFQ8N5V2 710 aa17.95■□□□□ 0.46
PMS2-204ENST00000406569 PPLO60437 1756 aa17.95■□□□□ 0.46
PMS2-204ENST00000406569 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
PMS2-204ENST00000406569 ASXL2Q76L83 1435 aa17.92■□□□□ 0.46
PMS2-204ENST00000406569 ZNF518AQ6AHZ1 1483 aa17.92■□□□□ 0.46
PMS2-204ENST00000406569 CFAP74Q9C0B2 1584 aa17.92■□□□□ 0.46
PMS2-204ENST00000406569 ADGRF5Q8IZF2 1346 aa17.92■□□□□ 0.46
PMS2-204ENST00000406569 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
PMS2-204ENST00000406569 CFAP70Q5T0N1 1121 aa17.91■□□□□ 0.46
PMS2-204ENST00000406569 C20orf194Q5TEA3 1177 aa17.9■□□□□ 0.46
PMS2-204ENST00000406569 POLR3AO14802 1390 aaPredicted RBP17.89■□□□□ 0.45
PMS2-204ENST00000406569 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
PMS2-204ENST00000406569 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
PMS2-204ENST00000406569 SHPRHQ149N8 1683 aa17.89■□□□□ 0.45
PMS2-204ENST00000406569 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
PMS2-204ENST00000406569 CARD14Q9BXL6 1004 aa17.88■□□□□ 0.45
PMS2-204ENST00000406569 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
PMS2-204ENST00000406569 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
PMS2-204ENST00000406569 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
PMS2-204ENST00000406569 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
PMS2-204ENST00000406569 MLH3Q9UHC1 1453 aa17.87■□□□□ 0.45
PMS2-204ENST00000406569 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
PMS2-204ENST00000406569 NOS1P29475 1434 aa17.86■□□□□ 0.45
PMS2-204ENST00000406569 NPATQ14207 1427 aa17.84■□□□□ 0.45
PMS2-204ENST00000406569 POGZQ7Z3K3 1410 aa17.84■□□□□ 0.45
PMS2-204ENST00000406569 E9PSI1 815 aa17.84■□□□□ 0.45
PMS2-204ENST00000406569 CENPJQ9HC77 1338 aaPredicted RBP17.82■□□□□ 0.44
PMS2-204ENST00000406569 APAF1O14727 1248 aa17.82■□□□□ 0.44
PMS2-204ENST00000406569 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
PMS2-204ENST00000406569 PIK3C2BO00750 1634 aa17.82■□□□□ 0.44
PMS2-204ENST00000406569 NBR1Q14596 966 aa17.81■□□□□ 0.44
PMS2-204ENST00000406569 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
PMS2-204ENST00000406569 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
PMS2-204ENST00000406569 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
PMS2-204ENST00000406569 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
PMS2-204ENST00000406569 ABCC3O15438 1527 aa17.8■□□□□ 0.44
PMS2-204ENST00000406569 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
PMS2-204ENST00000406569 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
PMS2-204ENST00000406569 IQSEC2Q5JU85 1478 aa17.79■□□□□ 0.44
PMS2-204ENST00000406569 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
PMS2-204ENST00000406569 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
PMS2-204ENST00000406569 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
PMS2-204ENST00000406569 USP35Q9P2H5 1018 aa17.78■□□□□ 0.44
PMS2-204ENST00000406569 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
PMS2-204ENST00000406569 SIGLEC1Q9BZZ2 1709 aa17.77■□□□□ 0.44
PMS2-204ENST00000406569 CFAP65Q6ZU64 1925 aaKnown RBP17.77■□□□□ 0.44
PMS2-204ENST00000406569 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
PMS2-204ENST00000406569 GLI2P10070 1586 aa17.76■□□□□ 0.43
PMS2-204ENST00000406569 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
PMS2-204ENST00000406569 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms