RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
NUP43-204ENST00000403890 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
NUP43-204ENST00000403890 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
NUP43-204ENST00000403890 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
NUP43-204ENST00000403890 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
NUP43-204ENST00000403890 EHBP1L1Q8N3D4 1523 aa14.94□□□□□ -0.02
NUP43-204ENST00000403890 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
NUP43-204ENST00000403890 SPATA31A6Q5VVP1 1343 aa14.93□□□□□ -0.02
NUP43-204ENST00000403890 RXRBP28702 533 aa14.93□□□□□ -0.02
NUP43-204ENST00000403890 MSH6P52701 1360 aa14.93□□□□□ -0.02
NUP43-204ENST00000403890 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
NUP43-204ENST00000403890 SRCAPQ6ZRS2 3230 aa14.92□□□□□ -0.02
NUP43-204ENST00000403890 PHLPP1O60346 1717 aa14.91□□□□□ -0.02
NUP43-204ENST00000403890 PRDM15P57071 1507 aaPredicted RBP14.91□□□□□ -0.02
NUP43-204ENST00000403890 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
NUP43-204ENST00000403890 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
NUP43-204ENST00000403890 FGD6Q6ZV73 1430 aa14.88□□□□□ -0.03
NUP43-204ENST00000403890 LRP6O75581 1613 aa14.88□□□□□ -0.03
NUP43-204ENST00000403890 IDI1Q13907 227 aa14.87□□□□□ -0.03
NUP43-204ENST00000403890 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
NUP43-204ENST00000403890 NKTRP30414 1462 aaKnown RBP14.87□□□□□ -0.03
NUP43-204ENST00000403890 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
NUP43-204ENST00000403890 BCANQ96GW7 911 aa14.86□□□□□ -0.03
NUP43-204ENST00000403890 TET3O43151 1660 aa14.86□□□□□ -0.03
NUP43-204ENST00000403890 CDK12Q9NYV4 1490 aaPredicted RBP14.85□□□□□ -0.03
NUP43-204ENST00000403890 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
NUP43-204ENST00000403890 CEP152O94986 1710 aa14.85□□□□□ -0.03
NUP43-204ENST00000403890 PIK3C2BO00750 1634 aa14.84□□□□□ -0.03
NUP43-204ENST00000403890 COL16A1Q07092 1604 aaPredicted RBP14.84□□□□□ -0.03
NUP43-204ENST00000403890 EFCAB6Q5THR3 1501 aa14.83□□□□□ -0.04
NUP43-204ENST00000403890 MAST1Q9Y2H9 1570 aa14.82□□□□□ -0.04
NUP43-204ENST00000403890 NUTM2BA6NNL0 878 aaPredicted RBP14.82□□□□□ -0.04
NUP43-204ENST00000403890 NUTM2EB1AL46 878 aaPredicted RBP14.82□□□□□ -0.04
NUP43-204ENST00000403890 NUTM2AQ8IVF1 878 aaPredicted RBP14.82□□□□□ -0.04
NUP43-204ENST00000403890 NWD1Q149M9 1564 aa14.81□□□□□ -0.04
NUP43-204ENST00000403890 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
NUP43-204ENST00000403890 CADPS2Q86UW7 1296 aa14.8□□□□□ -0.04
NUP43-204ENST00000403890 AFF2P51816 1311 aa14.8□□□□□ -0.04
NUP43-204ENST00000403890 DUOX2Q9NRD8 1548 aa14.8□□□□□ -0.04
NUP43-204ENST00000403890 KDM5AP29375 1690 aaKnown RBP14.79□□□□□ -0.04
NUP43-204ENST00000403890 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
NUP43-204ENST00000403890 NCOA3Q9Y6Q9 1424 aa14.79□□□□□ -0.04
NUP43-204ENST00000403890 KANK1Q14678 1352 aa14.78□□□□□ -0.04
NUP43-204ENST00000403890 ATF3P18847 181 aa14.78□□□□□ -0.04
NUP43-204ENST00000403890 C19orf44Q9H6X5 657 aa14.78□□□□□ -0.04
NUP43-204ENST00000403890 RBM6P78332 1123 aaKnown RBP14.77□□□□□ -0.05
NUP43-204ENST00000403890 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.05
NUP43-204ENST00000403890 QTRT2Q9H974 415 aaKnown RBP14.77□□□□□ -0.05
NUP43-204ENST00000403890 RRP7BPQ9NSQ0 103 aa14.77□□□□□ -0.05
NUP43-204ENST00000403890 KIF15Q9NS87 1388 aa14.76□□□□□ -0.05
NUP43-204ENST00000403890 HDGFP51858 240 aaKnown RBP14.76□□□□□ -0.05
NUP43-204ENST00000403890 SLC52A1Q9NWF4 448 aa14.76□□□□□ -0.05
NUP43-204ENST00000403890 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
NUP43-204ENST00000403890 SHPRHQ149N8 1683 aa14.76□□□□□ -0.05
NUP43-204ENST00000403890 AHDC1Q5TGY3 1603 aaPredicted RBP14.76□□□□□ -0.05
NUP43-204ENST00000403890 TBX22Q9Y458 520 aa14.75□□□□□ -0.05
NUP43-204ENST00000403890 ERBINQ96RT1 1412 aa14.75□□□□□ -0.05
NUP43-204ENST00000403890 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
NUP43-204ENST00000403890 BRINP3Q76B58 766 aa14.74□□□□□ -0.05
NUP43-204ENST00000403890 RGS12O14924 1447 aa14.74□□□□□ -0.05
NUP43-204ENST00000403890 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
NUP43-204ENST00000403890 ZBTB22O15209 634 aa14.73□□□□□ -0.05
NUP43-204ENST00000403890 MYOM3Q5VTT5 1437 aa14.73□□□□□ -0.05
NUP43-204ENST00000403890 CHD2O14647 1828 aaKnown RBP14.72□□□□□ -0.05
NUP43-204ENST00000403890 NGLY1Q96IV0 654 aa14.72□□□□□ -0.05
NUP43-204ENST00000403890 C8orf37Q96NL8 207 aa14.72□□□□□ -0.05
NUP43-204ENST00000403890 NOS1P29475 1434 aa14.72□□□□□ -0.05
NUP43-204ENST00000403890 ADGRB3O60242 1522 aa14.71□□□□□ -0.06
NUP43-204ENST00000403890 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
NUP43-204ENST00000403890 ATAD2Q6PL18 1390 aa14.7□□□□□ -0.06
NUP43-204ENST00000403890 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
NUP43-204ENST00000403890 LMTK2Q8IWU2 1503 aa14.69□□□□□ -0.06
NUP43-204ENST00000403890 DIP2AQ14689 1571 aa14.68□□□□□ -0.06
NUP43-204ENST00000403890 SETD5Q9C0A6 1442 aa14.68□□□□□ -0.06
NUP43-204ENST00000403890 RIMS2Q9UQ26 1411 aa14.68□□□□□ -0.06
NUP43-204ENST00000403890 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.68□□□□□ -0.06
NUP43-204ENST00000403890 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.68□□□□□ -0.06
NUP43-204ENST00000403890 PIK3R4Q99570 1358 aa14.66□□□□□ -0.06
NUP43-204ENST00000403890 ABCC5O15440 1437 aa14.66□□□□□ -0.06
NUP43-204ENST00000403890 AMOTL2Q9Y2J4 779 aa14.65□□□□□ -0.06
NUP43-204ENST00000403890 CCDC125Q86Z20 511 aa14.64□□□□□ -0.07
NUP43-204ENST00000403890 ADAMTS2O95450 1211 aa14.63□□□□□ -0.07
NUP43-204ENST00000403890 KANK4Q5T7N3 995 aaPredicted RBP14.63□□□□□ -0.07
NUP43-204ENST00000403890 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
NUP43-204ENST00000403890 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
NUP43-204ENST00000403890 SETBP1Q9Y6X0 1596 aa14.63□□□□□ -0.07
NUP43-204ENST00000403890 PNPLA6Q8IY17 1366 aa14.62□□□□□ -0.07
NUP43-204ENST00000403890 ASXL1Q8IXJ9 1541 aa14.62□□□□□ -0.07
NUP43-204ENST00000403890 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
NUP43-204ENST00000403890 DCCP43146 1447 aa14.62□□□□□ -0.07
NUP43-204ENST00000403890 SP7Q8TDD2 431 aaPredicted RBP14.62□□□□□ -0.07
NUP43-204ENST00000403890 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
NUP43-204ENST00000403890 ANKRD30AQ9BXX3 1397 aa14.61□□□□□ -0.07
NUP43-204ENST00000403890 USP21Q9UK80 565 aa14.61□□□□□ -0.07
NUP43-204ENST00000403890 CHIC2Q9UKJ5 165 aa14.61□□□□□ -0.07
NUP43-204ENST00000403890 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
NUP43-204ENST00000403890 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
NUP43-204ENST00000403890 SPDYE2Q495Y8 402 aa14.6□□□□□ -0.07
NUP43-204ENST00000403890 DDX17Q92841 729 aaKnown RBP14.6□□□□□ -0.07
NUP43-204ENST00000403890 RPRD2Q5VT52 1461 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms