RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
LINC01139-201ENST00000400946 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
LINC01139-201ENST00000400946 ABCC1P33527 1531 aa11.81□□□□□ -0.52
LINC01139-201ENST00000400946 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
LINC01139-201ENST00000400946 A2MP01023 1474 aa11.8□□□□□ -0.52
LINC01139-201ENST00000400946 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
LINC01139-201ENST00000400946 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
LINC01139-201ENST00000400946 PDE3BQ13370 1112 aa11.8□□□□□ -0.52
LINC01139-201ENST00000400946 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
LINC01139-201ENST00000400946 TMC1Q8TDI8 760 aa11.8□□□□□ -0.52
LINC01139-201ENST00000400946 COL17A1Q9UMD9 1497 aaPredicted RBP11.79□□□□□ -0.52
LINC01139-201ENST00000400946 PARD3Q8TEW0 1356 aa11.79□□□□□ -0.52
LINC01139-201ENST00000400946 CD109Q6YHK3 1445 aa11.78□□□□□ -0.52
LINC01139-201ENST00000400946 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
LINC01139-201ENST00000400946 DEPDC5O75140 1603 aa11.78□□□□□ -0.52
LINC01139-201ENST00000400946 LHX8Q68G74 356 aa11.77□□□□□ -0.52
LINC01139-201ENST00000400946 NLRP13Q86W25 1043 aa11.77□□□□□ -0.52
LINC01139-201ENST00000400946 TRPM2O94759 1503 aa11.76□□□□□ -0.53
LINC01139-201ENST00000400946 ABCA9Q8IUA7 1624 aa11.76□□□□□ -0.53
LINC01139-201ENST00000400946 ERICH6Q7L0X2 663 aa11.76□□□□□ -0.53
LINC01139-201ENST00000400946 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
LINC01139-201ENST00000400946 CEP152O94986 1710 aa11.75□□□□□ -0.53
LINC01139-201ENST00000400946 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
LINC01139-201ENST00000400946 PTPRTO14522 1441 aa11.74□□□□□ -0.53
LINC01139-201ENST00000400946 SCAPERQ9BY12 1400 aa11.74□□□□□ -0.53
LINC01139-201ENST00000400946 PER1O15534 1290 aaPredicted RBP11.74□□□□□ -0.53
LINC01139-201ENST00000400946 TET3O43151 1660 aa11.74□□□□□ -0.53
LINC01139-201ENST00000400946 IQGAP1P46940 1657 aa11.73□□□□□ -0.53
LINC01139-201ENST00000400946 SPHKAPQ2M3C7 1700 aa11.73□□□□□ -0.53
LINC01139-201ENST00000400946 VWDEQ8N2E2 1590 aa11.72□□□□□ -0.53
LINC01139-201ENST00000400946 ZFYVE16Q7Z3T8 1539 aa11.72□□□□□ -0.53
LINC01139-201ENST00000400946 TMF1P82094 1093 aa11.72□□□□□ -0.53
LINC01139-201ENST00000400946 CDCA8Q53HL2 280 aa11.72□□□□□ -0.53
LINC01139-201ENST00000400946 TESK2Q96S53 571 aa11.72□□□□□ -0.53
LINC01139-201ENST00000400946 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
LINC01139-201ENST00000400946 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
LINC01139-201ENST00000400946 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
LINC01139-201ENST00000400946 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
LINC01139-201ENST00000400946 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
LINC01139-201ENST00000400946 BLMP54132 1417 aaPredicted RBP11.69□□□□□ -0.54
LINC01139-201ENST00000400946 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
LINC01139-201ENST00000400946 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
LINC01139-201ENST00000400946 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
LINC01139-201ENST00000400946 TRAPPC8Q9Y2L5 1435 aa11.68□□□□□ -0.54
LINC01139-201ENST00000400946 KANK1Q14678 1352 aa11.68□□□□□ -0.54
LINC01139-201ENST00000400946 SYNMO15061 1565 aa11.68□□□□□ -0.54
LINC01139-201ENST00000400946 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
LINC01139-201ENST00000400946 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
LINC01139-201ENST00000400946 NEO1Q92859 1461 aa11.66□□□□□ -0.54
LINC01139-201ENST00000400946 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
LINC01139-201ENST00000400946 EIF3AQ14152 1382 aaKnown RBP11.66□□□□□ -0.54
LINC01139-201ENST00000400946 MYOM2P54296 1465 aa11.66□□□□□ -0.54
LINC01139-201ENST00000400946 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
LINC01139-201ENST00000400946 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
LINC01139-201ENST00000400946 DISP3Q9P2K9 1392 aa11.65□□□□□ -0.54
LINC01139-201ENST00000400946 CCDC136Q96JN2 1154 aa11.65□□□□□ -0.55
LINC01139-201ENST00000400946 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.55
LINC01139-201ENST00000400946 CLTCL1P53675 1640 aa11.64□□□□□ -0.55
LINC01139-201ENST00000400946 FANCAO15360 1455 aa11.64□□□□□ -0.55
LINC01139-201ENST00000400946 RRP1P56182 461 aaKnown RBP11.63□□□□□ -0.55
LINC01139-201ENST00000400946 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
LINC01139-201ENST00000400946 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
LINC01139-201ENST00000400946 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
LINC01139-201ENST00000400946 PIK3C2GO75747 1445 aa11.62□□□□□ -0.55
LINC01139-201ENST00000400946 PANK3Q9H999 370 aa11.62□□□□□ -0.55
LINC01139-201ENST00000400946 SBNO2Q9Y2G9 1366 aa11.61□□□□□ -0.55
LINC01139-201ENST00000400946 EVX2Q03828 476 aa11.61□□□□□ -0.55
LINC01139-201ENST00000400946 KIF1BO60333 1816 aa11.61□□□□□ -0.55
LINC01139-201ENST00000400946 IFT172Q9UG01 1749 aa11.61□□□□□ -0.55
LINC01139-201ENST00000400946 ASXL1Q8IXJ9 1541 aa11.61□□□□□ -0.55
LINC01139-201ENST00000400946 RAPGEF3O95398 923 aa11.6□□□□□ -0.55
LINC01139-201ENST00000400946 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
LINC01139-201ENST00000400946 MROH1Q8NDA8 1641 aa11.6□□□□□ -0.55
LINC01139-201ENST00000400946 MYO3AQ8NEV4 1616 aa11.6□□□□□ -0.55
LINC01139-201ENST00000400946 KDM5AP29375 1690 aaKnown RBP11.6□□□□□ -0.55
LINC01139-201ENST00000400946 EFCAB6Q5THR3 1501 aa11.6□□□□□ -0.55
LINC01139-201ENST00000400946 SETBP1Q9Y6X0 1596 aa11.59□□□□□ -0.55
LINC01139-201ENST00000400946 ADGRL1O94910 1474 aa11.59□□□□□ -0.55
LINC01139-201ENST00000400946 NRXN1Q9ULB1 1477 aa11.59□□□□□ -0.55
LINC01139-201ENST00000400946 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
LINC01139-201ENST00000400946 MS4A1P11836 297 aa11.59□□□□□ -0.55
LINC01139-201ENST00000400946 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
LINC01139-201ENST00000400946 FRMPD1Q5SYB0 1578 aa11.58□□□□□ -0.56
LINC01139-201ENST00000400946 TCERG1O14776 1098 aaKnown RBP11.58□□□□□ -0.56
LINC01139-201ENST00000400946 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC01139-201ENST00000400946 MYOM1P52179 1685 aa11.58□□□□□ -0.56
LINC01139-201ENST00000400946 PITPNM1O00562 1244 aa11.57□□□□□ -0.56
LINC01139-201ENST00000400946 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
LINC01139-201ENST00000400946 RICTORQ6R327 1708 aa11.57□□□□□ -0.56
LINC01139-201ENST00000400946 AFAP1Q8N556 730 aa11.56□□□□□ -0.56
LINC01139-201ENST00000400946 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
LINC01139-201ENST00000400946 MLH3Q9UHC1 1453 aa11.55□□□□□ -0.56
LINC01139-201ENST00000400946 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
LINC01139-201ENST00000400946 ARXQ96QS3 562 aa11.55□□□□□ -0.56
LINC01139-201ENST00000400946 ABCA6Q8N139 1617 aa11.55□□□□□ -0.56
LINC01139-201ENST00000400946 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
LINC01139-201ENST00000400946 CC2D1BQ5T0F9 858 aaKnown RBP11.54□□□□□ -0.56
LINC01139-201ENST00000400946 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
LINC01139-201ENST00000400946 ADGRB3O60242 1522 aa11.53□□□□□ -0.56
LINC01139-201ENST00000400946 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms