RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 ABCC5O15440 1437 aa14.33□□□□□ -0.12
PRAMEF1-202ENST00000400814 DNMT1P26358 1616 aaKnown RBP14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 ARHGAP5Q13017 1502 aa14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 DPYSL4O14531 572 aa14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 RSPH4AQ5TD94 716 aa14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 EMILIN3Q9NT22 766 aa14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 DAPK1P53355 1430 aa14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 SAMD9LQ8IVG5 1584 aa14.32□□□□□ -0.12
PRAMEF1-202ENST00000400814 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
PRAMEF1-202ENST00000400814 HRCP23327 699 aa14.31□□□□□ -0.12
PRAMEF1-202ENST00000400814 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
PRAMEF1-202ENST00000400814 GLI2P10070 1586 aa14.3□□□□□ -0.12
PRAMEF1-202ENST00000400814 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
PRAMEF1-202ENST00000400814 PLEKHH2Q8IVE3 1493 aa14.3□□□□□ -0.12
PRAMEF1-202ENST00000400814 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
PRAMEF1-202ENST00000400814 HNRNPMP52272 730 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRAMEF1-202ENST00000400814 PDIA6Q15084 440 aa14.29□□□□□ -0.12
PRAMEF1-202ENST00000400814 ARHGEF5Q12774 1597 aa14.29□□□□□ -0.12
PRAMEF1-202ENST00000400814 CD109Q6YHK3 1445 aa14.28□□□□□ -0.12
PRAMEF1-202ENST00000400814 AKNAQ7Z591 1439 aa14.28□□□□□ -0.12
PRAMEF1-202ENST00000400814 DSG2Q14126 1118 aa14.28□□□□□ -0.12
PRAMEF1-202ENST00000400814 ROCK1Q13464 1354 aa14.28□□□□□ -0.12
PRAMEF1-202ENST00000400814 TRIM66O15016 1216 aa14.27□□□□□ -0.12
PRAMEF1-202ENST00000400814 KDM4CQ9H3R0 1056 aa14.27□□□□□ -0.12
PRAMEF1-202ENST00000400814 HFM1A2PYH4 1435 aa14.27□□□□□ -0.13
PRAMEF1-202ENST00000400814 IL27Q8NEV9 243 aa14.26□□□□□ -0.13
PRAMEF1-202ENST00000400814 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
PRAMEF1-202ENST00000400814 FANCAO15360 1455 aa14.26□□□□□ -0.13
PRAMEF1-202ENST00000400814 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
PRAMEF1-202ENST00000400814 NAIPQ13075 1403 aa14.25□□□□□ -0.13
PRAMEF1-202ENST00000400814 TSPY4P0CV99 314 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 TSPY10P0CW01 314 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 PDE4DQ08499 809 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 RAB3GAP2Q9H2M9 1393 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 ADGRL2O95490 1459 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 CCDC141Q6ZP82 1450 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 SHANK2Q9UPX8 1470 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 ABCC1P33527 1531 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 CROCC2H7BZ55 1655 aa14.24□□□□□ -0.13
PRAMEF1-202ENST00000400814 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
PRAMEF1-202ENST00000400814 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
PRAMEF1-202ENST00000400814 DPY19L2Q6NUT2 758 aa14.23□□□□□ -0.13
PRAMEF1-202ENST00000400814 SYCP2Q9BX26 1530 aa14.23□□□□□ -0.13
PRAMEF1-202ENST00000400814 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
PRAMEF1-202ENST00000400814 NCOA1Q15788 1441 aa14.22□□□□□ -0.13
PRAMEF1-202ENST00000400814 FOXK1P85037 733 aa14.22□□□□□ -0.13
PRAMEF1-202ENST00000400814 RRP7BPQ9NSQ0 103 aa14.22□□□□□ -0.13
PRAMEF1-202ENST00000400814 MICALL2Q8IY33 904 aa14.21□□□□□ -0.13
PRAMEF1-202ENST00000400814 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
PRAMEF1-202ENST00000400814 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.14
PRAMEF1-202ENST00000400814 ANKRD30AQ9BXX3 1397 aa14.21□□□□□ -0.14
PRAMEF1-202ENST00000400814 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
PRAMEF1-202ENST00000400814 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
PRAMEF1-202ENST00000400814 NEO1Q92859 1461 aa14.2□□□□□ -0.14
PRAMEF1-202ENST00000400814 TRAPPC8Q9Y2L5 1435 aa14.2□□□□□ -0.14
PRAMEF1-202ENST00000400814 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
PRAMEF1-202ENST00000400814 SCAPERQ9BY12 1400 aa14.19□□□□□ -0.14
PRAMEF1-202ENST00000400814 GCC2Q8IWJ2 1684 aa14.19□□□□□ -0.14
PRAMEF1-202ENST00000400814 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
PRAMEF1-202ENST00000400814 GPR37O15354 613 aa14.18□□□□□ -0.14
PRAMEF1-202ENST00000400814 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
PRAMEF1-202ENST00000400814 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
PRAMEF1-202ENST00000400814 KIF13AQ9H1H9 1805 aa14.16□□□□□ -0.14
PRAMEF1-202ENST00000400814 AFAP1Q8N556 730 aa14.16□□□□□ -0.14
PRAMEF1-202ENST00000400814 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
PRAMEF1-202ENST00000400814 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
PRAMEF1-202ENST00000400814 DHX57Q6P158 1386 aaKnown RBP14.16□□□□□ -0.14
PRAMEF1-202ENST00000400814 PLPP6Q8IY26 295 aa14.15□□□□□ -0.15
PRAMEF1-202ENST00000400814 PPRC1Q5VV67 1664 aaKnown RBP14.14□□□□□ -0.15
PRAMEF1-202ENST00000400814 KDM6BO15054 1643 aa14.13□□□□□ -0.15
PRAMEF1-202ENST00000400814 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
PRAMEF1-202ENST00000400814 PLXNC1O60486 1568 aa14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 MINK1Q8N4C8 1332 aaPredicted RBP14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 CLSPNQ9HAW4 1339 aa14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 PDCD7Q8N8D1 485 aaKnown RBP14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 KIF15Q9NS87 1388 aa14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 TEX14Q8IWB6 1497 aa14.12□□□□□ -0.15
PRAMEF1-202ENST00000400814 POGZQ7Z3K3 1410 aa14.11□□□□□ -0.15
PRAMEF1-202ENST00000400814 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
PRAMEF1-202ENST00000400814 GRXCR2A6NFK2 248 aa14.11□□□□□ -0.15
PRAMEF1-202ENST00000400814 ZEB1P37275 1124 aaPredicted RBP14.11□□□□□ -0.15
PRAMEF1-202ENST00000400814 DENND4BO75064 1496 aaPredicted RBP14.1□□□□□ -0.15
PRAMEF1-202ENST00000400814 ZMYND15Q9H091 742 aa14.1□□□□□ -0.15
PRAMEF1-202ENST00000400814 KDM5CP41229 1560 aa14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 INO80Q9ULG1 1556 aaPredicted RBP14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 TSPOAP1O95153 1857 aa14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 C2orf72A6NCS6 295 aa14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 MAP3K9P80192 1104 aa14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 TMEM121BQ9BXQ6 578 aaPredicted RBP14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 ZFYVE16Q7Z3T8 1539 aa14.09□□□□□ -0.15
PRAMEF1-202ENST00000400814 MLH3Q9UHC1 1453 aa14.08□□□□□ -0.16
PRAMEF1-202ENST00000400814 ATP7AQ04656 1500 aa14.08□□□□□ -0.16
PRAMEF1-202ENST00000400814 DUOX2Q9NRD8 1548 aa14.08□□□□□ -0.16
PRAMEF1-202ENST00000400814 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
PRAMEF1-202ENST00000400814 KIF3CO14782 793 aa14.08□□□□□ -0.16
PRAMEF1-202ENST00000400814 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms