RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 TOM1O60784 492 aa11.63□□□□□ -0.55
LINC02408-201ENST00000400306 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
LINC02408-201ENST00000400306 KIF3BO15066 747 aa11.62□□□□□ -0.55
LINC02408-201ENST00000400306 CPS1P31327 1500 aa11.62□□□□□ -0.55
LINC02408-201ENST00000400306 NPATQ14207 1427 aa11.62□□□□□ -0.55
LINC02408-201ENST00000400306 UNC13BO14795 1591 aa11.62□□□□□ -0.55
LINC02408-201ENST00000400306 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
LINC02408-201ENST00000400306 PKD2Q13563 968 aa11.62□□□□□ -0.55
LINC02408-201ENST00000400306 CLTCQ00610 1675 aaKnown RBP11.61□□□□□ -0.55
LINC02408-201ENST00000400306 DEPDC5O75140 1603 aa11.61□□□□□ -0.55
LINC02408-201ENST00000400306 RNF17Q9BXT8 1623 aaKnown RBP11.61□□□□□ -0.55
LINC02408-201ENST00000400306 CEP152O94986 1710 aa11.6□□□□□ -0.55
LINC02408-201ENST00000400306 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
LINC02408-201ENST00000400306 FKBP8Q14318 412 aa11.59□□□□□ -0.55
LINC02408-201ENST00000400306 GGT6Q6P531 493 aa11.59□□□□□ -0.55
LINC02408-201ENST00000400306 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
LINC02408-201ENST00000400306 ALKQ9UM73 1620 aa11.58□□□□□ -0.56
LINC02408-201ENST00000400306 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
LINC02408-201ENST00000400306 PRDM15P57071 1507 aaPredicted RBP11.57□□□□□ -0.56
LINC02408-201ENST00000400306 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
LINC02408-201ENST00000400306 NUP155O75694 1391 aa11.56□□□□□ -0.56
LINC02408-201ENST00000400306 PZPP20742 1482 aa11.56□□□□□ -0.56
LINC02408-201ENST00000400306 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
LINC02408-201ENST00000400306 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
LINC02408-201ENST00000400306 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
LINC02408-201ENST00000400306 VWDEQ8N2E2 1590 aa11.55□□□□□ -0.56
LINC02408-201ENST00000400306 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
LINC02408-201ENST00000400306 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
LINC02408-201ENST00000400306 ABCC3O15438 1527 aa11.54□□□□□ -0.56
LINC02408-201ENST00000400306 ZMYM3Q14202 1370 aa11.53□□□□□ -0.56
LINC02408-201ENST00000400306 KANK1Q14678 1352 aa11.53□□□□□ -0.56
LINC02408-201ENST00000400306 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
LINC02408-201ENST00000400306 HRCP23327 699 aa11.53□□□□□ -0.56
LINC02408-201ENST00000400306 RGS17Q9UGC6 210 aaPredicted RBP11.53□□□□□ -0.56
LINC02408-201ENST00000400306 ZC3H13Q5T200 1668 aaKnown RBP11.53□□□□□ -0.56
LINC02408-201ENST00000400306 E9PCH4 1651 aa11.52□□□□□ -0.57
LINC02408-201ENST00000400306 TET3O43151 1660 aa11.52□□□□□ -0.57
LINC02408-201ENST00000400306 STRCP1A6NGW2 1772 aa11.51□□□□□ -0.57
LINC02408-201ENST00000400306 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
LINC02408-201ENST00000400306 CFAP65Q6ZU64 1925 aaKnown RBP11.51□□□□□ -0.57
LINC02408-201ENST00000400306 WASHC2CQ9Y4E1 1318 aa11.51□□□□□ -0.57
LINC02408-201ENST00000400306 MPHOSPH9Q99550 1183 aa11.51□□□□□ -0.57
LINC02408-201ENST00000400306 EVX2Q03828 476 aa11.5□□□□□ -0.57
LINC02408-201ENST00000400306 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
LINC02408-201ENST00000400306 A2ML1A8K2U0 1454 aa11.49□□□□□ -0.57
LINC02408-201ENST00000400306 SYNMO15061 1565 aa11.49□□□□□ -0.57
LINC02408-201ENST00000400306 LMTK2Q8IWU2 1503 aa11.49□□□□□ -0.57
LINC02408-201ENST00000400306 IQGAP1P46940 1657 aa11.46□□□□□ -0.57
LINC02408-201ENST00000400306 SPHKAPQ2M3C7 1700 aa11.46□□□□□ -0.58
LINC02408-201ENST00000400306 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
LINC02408-201ENST00000400306 XIRP1Q702N8 1843 aaKnown RBP11.45□□□□□ -0.58
LINC02408-201ENST00000400306 POTEAQ6S8J7 498 aa11.44□□□□□ -0.58
LINC02408-201ENST00000400306 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
LINC02408-201ENST00000400306 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
LINC02408-201ENST00000400306 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
LINC02408-201ENST00000400306 UGGT1Q9NYU2 1555 aa11.43□□□□□ -0.58
LINC02408-201ENST00000400306 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
LINC02408-201ENST00000400306 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
LINC02408-201ENST00000400306 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
LINC02408-201ENST00000400306 CLTCL1P53675 1640 aa11.41□□□□□ -0.58
LINC02408-201ENST00000400306 RPRD2Q5VT52 1461 aaKnown RBP11.41□□□□□ -0.58
LINC02408-201ENST00000400306 SIN3AQ96ST3 1273 aa11.4□□□□□ -0.58
LINC02408-201ENST00000400306 TRPM2O94759 1503 aa11.4□□□□□ -0.58
LINC02408-201ENST00000400306 ANKRD30BQ9BXX2 1392 aa11.4□□□□□ -0.59
LINC02408-201ENST00000400306 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
LINC02408-201ENST00000400306 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
LINC02408-201ENST00000400306 NOS1P29475 1434 aa11.39□□□□□ -0.59
LINC02408-201ENST00000400306 MED14O60244 1454 aa11.39□□□□□ -0.59
LINC02408-201ENST00000400306 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
LINC02408-201ENST00000400306 ANKLE2Q86XL3 938 aa11.37□□□□□ -0.59
LINC02408-201ENST00000400306 PIK3C2BO00750 1634 aa11.37□□□□□ -0.59
LINC02408-201ENST00000400306 MYO5BQ9ULV0 1848 aa11.37□□□□□ -0.59
LINC02408-201ENST00000400306 MIER1Q8N108 512 aa11.36□□□□□ -0.59
LINC02408-201ENST00000400306 TNRQ92752 1358 aa11.36□□□□□ -0.59
LINC02408-201ENST00000400306 KIF1BO60333 1816 aa11.36□□□□□ -0.59
LINC02408-201ENST00000400306 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
LINC02408-201ENST00000400306 ROBO1Q9Y6N7 1651 aa11.35□□□□□ -0.59
LINC02408-201ENST00000400306 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
LINC02408-201ENST00000400306 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.59
LINC02408-201ENST00000400306 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.59
LINC02408-201ENST00000400306 IDI1Q13907 227 aa11.33□□□□□ -0.6
LINC02408-201ENST00000400306 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
LINC02408-201ENST00000400306 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
LINC02408-201ENST00000400306 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
LINC02408-201ENST00000400306 TMEM131LA2VDJ0 1609 aa11.32□□□□□ -0.6
LINC02408-201ENST00000400306 ADGRB3O60242 1522 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 THEMISQ8N1K5 641 aaPredicted RBP11.31□□□□□ -0.6
LINC02408-201ENST00000400306 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 NLRP1Q9C000 1473 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 RGL3Q3MIN7 710 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
LINC02408-201ENST00000400306 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
LINC02408-201ENST00000400306 GABBR2O75899 941 aa11.3□□□□□ -0.6
LINC02408-201ENST00000400306 SPATA31E1Q6ZUB1 1445 aa11.29□□□□□ -0.6
LINC02408-201ENST00000400306 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
LINC02408-201ENST00000400306 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
LINC02408-201ENST00000400306 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
LINC02408-201ENST00000400306 CLCN6P51797 869 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms