RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
PTPRM-203ENST00000400060 PRDM10Q9NQV6 1147 aa12.19□□□□□ -0.46
PTPRM-203ENST00000400060 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
PTPRM-203ENST00000400060 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
PTPRM-203ENST00000400060 PNISRQ8TF01 805 aaKnown RBP12.18□□□□□ -0.46
PTPRM-203ENST00000400060 FEZ1Q99689 392 aa12.18□□□□□ -0.46
PTPRM-203ENST00000400060 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
PTPRM-203ENST00000400060 CBX1P83916 185 aa12.17□□□□□ -0.46
PTPRM-203ENST00000400060 MCTP1Q6DN14 999 aa12.17□□□□□ -0.46
PTPRM-203ENST00000400060 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
PTPRM-203ENST00000400060 PKD2Q13563 968 aa12.17□□□□□ -0.46
PTPRM-203ENST00000400060 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
PTPRM-203ENST00000400060 FAM193AP78312 1265 aa12.16□□□□□ -0.46
PTPRM-203ENST00000400060 IGF1RP08069 1367 aa12.16□□□□□ -0.46
PTPRM-203ENST00000400060 DMTNQ08495 405 aa12.16□□□□□ -0.46
PTPRM-203ENST00000400060 LEKR1Q6ZMV7 388 aa12.16□□□□□ -0.46
PTPRM-203ENST00000400060 CCP110O43303 1012 aa12.15□□□□□ -0.46
PTPRM-203ENST00000400060 GABPB1Q06547 395 aaPredicted RBP12.15□□□□□ -0.46
PTPRM-203ENST00000400060 NCAPD3P42695 1498 aa12.15□□□□□ -0.47
PTPRM-203ENST00000400060 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
PTPRM-203ENST00000400060 NCOA1Q15788 1441 aa12.14□□□□□ -0.47
PTPRM-203ENST00000400060 ITPRIPQ8IWB1 547 aa12.14□□□□□ -0.47
PTPRM-203ENST00000400060 CCDC112Q8NEF3 446 aa12.14□□□□□ -0.47
PTPRM-203ENST00000400060 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
PTPRM-203ENST00000400060 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
PTPRM-203ENST00000400060 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
PTPRM-203ENST00000400060 CLGNO14967 610 aa12.13□□□□□ -0.47
PTPRM-203ENST00000400060 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
PTPRM-203ENST00000400060 MAPKBP1O60336 1514 aa12.13□□□□□ -0.47
PTPRM-203ENST00000400060 RABEP1Q15276 862 aa12.13□□□□□ -0.47
PTPRM-203ENST00000400060 KIF2AO00139 706 aaPredicted RBP12.13□□□□□ -0.47
PTPRM-203ENST00000400060 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
PTPRM-203ENST00000400060 MCM2P49736 904 aa12.13□□□□□ -0.47
PTPRM-203ENST00000400060 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 ZKSCAN5Q9Y2L8 839 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 HFM1A2PYH4 1435 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
PTPRM-203ENST00000400060 REC8O95072 547 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 KCNJ4P48050 445 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 TPM1P09493 284 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 FOXD1Q16676 465 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
PTPRM-203ENST00000400060 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
PTPRM-203ENST00000400060 KLHL40Q2TBA0 621 aa12.11□□□□□ -0.47
PTPRM-203ENST00000400060 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
PTPRM-203ENST00000400060 OGFRQ9NZT2 677 aa12.11□□□□□ -0.47
PTPRM-203ENST00000400060 GOLGA6L19H0YKK7 550 aa12.11□□□□□ -0.47
PTPRM-203ENST00000400060 FAM107BQ9H098 131 aa12.11□□□□□ -0.47
PTPRM-203ENST00000400060 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
PTPRM-203ENST00000400060 RDXP35241 583 aaKnown RBP12.1□□□□□ -0.47
PTPRM-203ENST00000400060 NUP155O75694 1391 aa12.1□□□□□ -0.47
PTPRM-203ENST00000400060 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
PTPRM-203ENST00000400060 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
PTPRM-203ENST00000400060 ERCC4Q92889 916 aaPredicted RBP12.1□□□□□ -0.47
PTPRM-203ENST00000400060 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
PTPRM-203ENST00000400060 XPCQ01831 940 aaPredicted RBP12.09□□□□□ -0.47
PTPRM-203ENST00000400060 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
PTPRM-203ENST00000400060 NOL7Q9UMY1 257 aaKnown RBP12.09□□□□□ -0.47
PTPRM-203ENST00000400060 KANK1Q14678 1352 aa12.09□□□□□ -0.47
PTPRM-203ENST00000400060 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
PTPRM-203ENST00000400060 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
PTPRM-203ENST00000400060 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
PTPRM-203ENST00000400060 MNS1Q8NEH6 495 aa12.08□□□□□ -0.48
PTPRM-203ENST00000400060 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
PTPRM-203ENST00000400060 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
PTPRM-203ENST00000400060 ZMYM3Q14202 1370 aa12.07□□□□□ -0.48
PTPRM-203ENST00000400060 CDC45O75419 566 aa12.07□□□□□ -0.48
PTPRM-203ENST00000400060 GTF2A1P52655 376 aaPredicted RBP12.07□□□□□ -0.48
PTPRM-203ENST00000400060 HSP90B2PQ58FF3 399 aa12.07□□□□□ -0.48
PTPRM-203ENST00000400060 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
PTPRM-203ENST00000400060 INTS3Q68E01 1043 aaKnown RBP12.06□□□□□ -0.48
PTPRM-203ENST00000400060 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
PTPRM-203ENST00000400060 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
PTPRM-203ENST00000400060 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
PTPRM-203ENST00000400060 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
PTPRM-203ENST00000400060 BRD2P25440 801 aaKnown RBP12.06□□□□□ -0.48
PTPRM-203ENST00000400060 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
PTPRM-203ENST00000400060 PAXBP1Q9Y5B6 917 aa12.06□□□□□ -0.48
PTPRM-203ENST00000400060 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
PTPRM-203ENST00000400060 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
PTPRM-203ENST00000400060 ZNF500O60304 480 aaPredicted RBP12.05□□□□□ -0.48
PTPRM-203ENST00000400060 PANK2Q9BZ23 570 aa12.05□□□□□ -0.48
PTPRM-203ENST00000400060 FSD2A1L4K1 749 aa12.05□□□□□ -0.48
PTPRM-203ENST00000400060 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
PTPRM-203ENST00000400060 MYRIPQ8NFW9 859 aa12.05□□□□□ -0.48
PTPRM-203ENST00000400060 HMMRO75330 724 aa12.04□□□□□ -0.48
PTPRM-203ENST00000400060 INSRP06213 1382 aa12.04□□□□□ -0.48
PTPRM-203ENST00000400060 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
PTPRM-203ENST00000400060 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
PTPRM-203ENST00000400060 CCDC184Q52MB2 194 aa12.04□□□□□ -0.48
PTPRM-203ENST00000400060 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
PTPRM-203ENST00000400060 CHMP4CQ96CF2 233 aa12.04□□□□□ -0.48
PTPRM-203ENST00000400060 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
PTPRM-203ENST00000400060 EIF3JO75822 258 aaKnown RBP12.03□□□□□ -0.48
PTPRM-203ENST00000400060 PPP1R9BQ96SB3 815 aa12.03□□□□□ -0.48
PTPRM-203ENST00000400060 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
PTPRM-203ENST00000400060 CT47B1P0C2W7 299 aaPredicted RBP12.03□□□□□ -0.48
PTPRM-203ENST00000400060 BMS1Q14692 1282 aaKnown RBP12.03□□□□□ -0.48
PTPRM-203ENST00000400060 NOL10Q9BSC4 688 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms