RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 SCAPERQ9BY12 1400 aa14.47□□□□□ -0.09
PCDHGA8-201ENST00000398604 CENPJQ9HC77 1338 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA8-201ENST00000398604 C9orf84Q5VXU9 1444 aa14.46□□□□□ -0.09
PCDHGA8-201ENST00000398604 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA8-201ENST00000398604 EIF3AQ14152 1382 aaKnown RBP14.45□□□□□ -0.1
PCDHGA8-201ENST00000398604 HFM1A2PYH4 1435 aa14.45□□□□□ -0.1
PCDHGA8-201ENST00000398604 EIF2S2P20042 333 aaKnown RBP14.45□□□□□ -0.1
PCDHGA8-201ENST00000398604 APAF1O14727 1248 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 G3V3G9 751 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 FOXD4L5Q5VV16 416 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 FOXD4L4Q8WXT5 416 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 TMX4Q9H1E5 349 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 NAIPQ13075 1403 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 NRDCO43847 1150 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 EVA1CP58658 441 aa14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA8-201ENST00000398604 MSH5O43196 834 aa14.43□□□□□ -0.1
PCDHGA8-201ENST00000398604 COG3Q96JB2 828 aa14.43□□□□□ -0.1
PCDHGA8-201ENST00000398604 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA8-201ENST00000398604 HMMRO75330 724 aa14.43□□□□□ -0.1
PCDHGA8-201ENST00000398604 TEFQ10587 303 aa14.42□□□□□ -0.1
PCDHGA8-201ENST00000398604 ROCK1Q13464 1354 aa14.42□□□□□ -0.1
PCDHGA8-201ENST00000398604 POGZQ7Z3K3 1410 aa14.42□□□□□ -0.1
PCDHGA8-201ENST00000398604 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
PCDHGA8-201ENST00000398604 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
PCDHGA8-201ENST00000398604 DAPK1P53355 1430 aa14.41□□□□□ -0.1
PCDHGA8-201ENST00000398604 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCDHGA8-201ENST00000398604 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
PCDHGA8-201ENST00000398604 FOXD4L6Q3SYB3 417 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA8-201ENST00000398604 FOXD4L3Q6VB84 417 aaPredicted RBP14.4□□□□□ -0.1
PCDHGA8-201ENST00000398604 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
PCDHGA8-201ENST00000398604 GOLGA6L6A8MZA4 724 aa14.4□□□□□ -0.1
PCDHGA8-201ENST00000398604 ATP10BO94823 1461 aa14.39□□□□□ -0.11
PCDHGA8-201ENST00000398604 HSP90B1P14625 803 aaKnown RBP14.39□□□□□ -0.11
PCDHGA8-201ENST00000398604 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
PCDHGA8-201ENST00000398604 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
PCDHGA8-201ENST00000398604 CHMP4AQ9BY43 222 aa14.39□□□□□ -0.11
PCDHGA8-201ENST00000398604 RILPL2Q969X0 211 aa14.39□□□□□ -0.11
PCDHGA8-201ENST00000398604 WASHC2AQ641Q2 1341 aa14.38□□□□□ -0.11
PCDHGA8-201ENST00000398604 LMOD3Q0VAK6 560 aa14.38□□□□□ -0.11
PCDHGA8-201ENST00000398604 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
PCDHGA8-201ENST00000398604 ANKRD45Q5TZF3 282 aa14.38□□□□□ -0.11
PCDHGA8-201ENST00000398604 PSME1Q06323 249 aa14.37□□□□□ -0.11
PCDHGA8-201ENST00000398604 CREBRFQ8IUR6 639 aa14.37□□□□□ -0.11
PCDHGA8-201ENST00000398604 C1orf141Q5JVX7 400 aa14.37□□□□□ -0.11
PCDHGA8-201ENST00000398604 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
PCDHGA8-201ENST00000398604 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 EVC2Q86UK5 1308 aa14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 ADGRL1O94910 1474 aa14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 NUP153P49790 1475 aaKnown RBP14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 SAMD9Q5K651 1589 aa14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 ARID3AQ99856 593 aa14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 TEX14Q8IWB6 1497 aa14.36□□□□□ -0.11
PCDHGA8-201ENST00000398604 CGNL1Q0VF96 1302 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 ASXL2Q76L83 1435 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 PDE4CQ08493 712 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 GPATCH3Q96I76 525 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 HDAC5Q9UQL6 1122 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 HMOX1P09601 288 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 GGNBP2Q9H3C7 697 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 USP35Q9P2H5 1018 aa14.35□□□□□ -0.11
PCDHGA8-201ENST00000398604 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 CAMSAP2Q08AD1 1489 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 IPO9Q96P70 1041 aaKnown RBP14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 WDR7Q9Y4E6 1490 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 MYBBP1AQ9BQG0 1328 aaKnown RBP14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 RAPGEF3O95398 923 aa14.34□□□□□ -0.11
PCDHGA8-201ENST00000398604 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.11
PCDHGA8-201ENST00000398604 DISP1Q96F81 1524 aa14.33□□□□□ -0.12
PCDHGA8-201ENST00000398604 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
PCDHGA8-201ENST00000398604 ANO8Q9HCE9 1232 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA8-201ENST00000398604 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
PCDHGA8-201ENST00000398604 PLCH2O75038 1416 aa14.33□□□□□ -0.12
PCDHGA8-201ENST00000398604 CEP170Q5SW79 1584 aa14.33□□□□□ -0.12
PCDHGA8-201ENST00000398604 FANCAO15360 1455 aa14.32□□□□□ -0.12
PCDHGA8-201ENST00000398604 KIF7Q2M1P5 1343 aa14.32□□□□□ -0.12
PCDHGA8-201ENST00000398604 RIPK4P57078 832 aa14.32□□□□□ -0.12
PCDHGA8-201ENST00000398604 USP47Q96K76 1375 aa14.32□□□□□ -0.12
PCDHGA8-201ENST00000398604 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
PCDHGA8-201ENST00000398604 CCDC7Q96M83 1385 aa14.32□□□□□ -0.12
PCDHGA8-201ENST00000398604 TTC5Q8N0Z6 440 aa14.31□□□□□ -0.12
PCDHGA8-201ENST00000398604 SLC52A1Q9NWF4 448 aa14.31□□□□□ -0.12
PCDHGA8-201ENST00000398604 FANCIQ9NVI1 1328 aa14.31□□□□□ -0.12
PCDHGA8-201ENST00000398604 DIAPH1O60610 1272 aaKnown RBP14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 CRBNQ96SW2 442 aa14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 RAD21O60216 631 aa14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
PCDHGA8-201ENST00000398604 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms