RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
CPSF1P1-201ENST00000397477 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
CPSF1P1-201ENST00000397477 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 CLUAP1Q96AJ1 413 aa13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
CPSF1P1-201ENST00000397477 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
CPSF1P1-201ENST00000397477 BCAR3O75815 825 aa13.61□□□□□ -0.23
CPSF1P1-201ENST00000397477 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 PDE4AP27815 886 aa13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 CDC42BPBQ9Y5S2 1711 aa13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
CPSF1P1-201ENST00000397477 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
CPSF1P1-201ENST00000397477 MTHFSP49914 203 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 COL17A1Q9UMD9 1497 aaPredicted RBP13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 NOS1P29475 1434 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 SOX12O15370 315 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 PANK1Q8TE04 598 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 GPRASP1Q5JY77 1395 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 DUSP27Q5VZP5 1158 aa13.53□□□□□ -0.24
CPSF1P1-201ENST00000397477 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
CPSF1P1-201ENST00000397477 MAGI2Q86UL8 1455 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 IDI1Q13907 227 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 NEFMP07197 916 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 STAC3Q96MF2 364 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 ATP10AO60312 1499 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 MAST1Q9Y2H9 1570 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 ZCCHC11Q5TAX3 1644 aaKnown RBP13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 RNF123Q5XPI4 1314 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 FBLN1P23142 703 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 E9PSI1 815 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 PRAM1Q96QH2 718 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
CPSF1P1-201ENST00000397477 ABCC1P33527 1531 aa13.48□□□□□ -0.25
CPSF1P1-201ENST00000397477 TSR2Q969E8 191 aaKnown RBP13.47□□□□□ -0.25
CPSF1P1-201ENST00000397477 ATP7AQ04656 1500 aa13.46□□□□□ -0.25
CPSF1P1-201ENST00000397477 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
CPSF1P1-201ENST00000397477 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
CPSF1P1-201ENST00000397477 RUNDC1Q96C34 613 aa13.46□□□□□ -0.26
CPSF1P1-201ENST00000397477 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.26
CPSF1P1-201ENST00000397477 RTEL1-TNFRSF6BF6WH68 1400 aa13.45□□□□□ -0.26
CPSF1P1-201ENST00000397477 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
CPSF1P1-201ENST00000397477 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
CPSF1P1-201ENST00000397477 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 HMOX1P09601 288 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
CPSF1P1-201ENST00000397477 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
CPSF1P1-201ENST00000397477 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
CPSF1P1-201ENST00000397477 ARXQ96QS3 562 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 IQGAP3Q86VI3 1631 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 UNC13BO14795 1591 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 ZFYVE16Q7Z3T8 1539 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 CDK19Q9BWU1 502 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
CPSF1P1-201ENST00000397477 RIPK4P57078 832 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms