RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
CPSF1P1-201ENST00000397477 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
CPSF1P1-201ENST00000397477 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 CLUAP1Q96AJ1 413 aa13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
CPSF1P1-201ENST00000397477 MINK1Q8N4C8 1332 aaPredicted RBP13.61□□□□□ -0.23
CPSF1P1-201ENST00000397477 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
CPSF1P1-201ENST00000397477 BCAR3O75815 825 aa13.61□□□□□ -0.23
CPSF1P1-201ENST00000397477 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 PDE4AP27815 886 aa13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 CDC42BPBQ9Y5S2 1711 aa13.6□□□□□ -0.23
CPSF1P1-201ENST00000397477 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
CPSF1P1-201ENST00000397477 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
CPSF1P1-201ENST00000397477 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
CPSF1P1-201ENST00000397477 MTHFSP49914 203 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
CPSF1P1-201ENST00000397477 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 COL17A1Q9UMD9 1497 aaPredicted RBP13.56□□□□□ -0.24
CPSF1P1-201ENST00000397477 NOS1P29475 1434 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
CPSF1P1-201ENST00000397477 SOX12O15370 315 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 PANK1Q8TE04 598 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 GPRASP1Q5JY77 1395 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
CPSF1P1-201ENST00000397477 DUSP27Q5VZP5 1158 aa13.53□□□□□ -0.24
CPSF1P1-201ENST00000397477 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
CPSF1P1-201ENST00000397477 MAGI2Q86UL8 1455 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 IDI1Q13907 227 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.24
CPSF1P1-201ENST00000397477 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
CPSF1P1-201ENST00000397477 NEFMP07197 916 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 STAC3Q96MF2 364 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 ATP10AO60312 1499 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 MAST1Q9Y2H9 1570 aa13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 ZCCHC11Q5TAX3 1644 aaKnown RBP13.51□□□□□ -0.25
CPSF1P1-201ENST00000397477 RNF123Q5XPI4 1314 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 FBLN1P23142 703 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 E9PSI1 815 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 PRAM1Q96QH2 718 aa13.5□□□□□ -0.25
CPSF1P1-201ENST00000397477 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
CPSF1P1-201ENST00000397477 ABCC1P33527 1531 aa13.48□□□□□ -0.25
CPSF1P1-201ENST00000397477 TSR2Q969E8 191 aaKnown RBP13.47□□□□□ -0.25
CPSF1P1-201ENST00000397477 ATP7AQ04656 1500 aa13.46□□□□□ -0.25
CPSF1P1-201ENST00000397477 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
CPSF1P1-201ENST00000397477 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
CPSF1P1-201ENST00000397477 RUNDC1Q96C34 613 aa13.46□□□□□ -0.26
CPSF1P1-201ENST00000397477 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.26
CPSF1P1-201ENST00000397477 RTEL1-TNFRSF6BF6WH68 1400 aa13.45□□□□□ -0.26
CPSF1P1-201ENST00000397477 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
CPSF1P1-201ENST00000397477 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
CPSF1P1-201ENST00000397477 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
CPSF1P1-201ENST00000397477 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 HMOX1P09601 288 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
CPSF1P1-201ENST00000397477 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
CPSF1P1-201ENST00000397477 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
CPSF1P1-201ENST00000397477 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
CPSF1P1-201ENST00000397477 ARXQ96QS3 562 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 IQGAP3Q86VI3 1631 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 UNC13BO14795 1591 aa13.41□□□□□ -0.26
CPSF1P1-201ENST00000397477 ZFYVE16Q7Z3T8 1539 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 CDK19Q9BWU1 502 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
CPSF1P1-201ENST00000397477 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
CPSF1P1-201ENST00000397477 RIPK4P57078 832 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms