RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZC3H13Q5T200 1668 aaKnown RBP13.69□□□□□ -0.22
CAPN3-208ENST00000397204 ERBINQ96RT1 1412 aa13.68□□□□□ -0.22
CAPN3-208ENST00000397204 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
CAPN3-208ENST00000397204 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
CAPN3-208ENST00000397204 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
CAPN3-208ENST00000397204 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
CAPN3-208ENST00000397204 MROH1Q8NDA8 1641 aa13.66□□□□□ -0.22
CAPN3-208ENST00000397204 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
CAPN3-208ENST00000397204 IDI1Q13907 227 aa13.66□□□□□ -0.22
CAPN3-208ENST00000397204 SLIT1O75093 1534 aa13.65□□□□□ -0.22
CAPN3-208ENST00000397204 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
CAPN3-208ENST00000397204 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
CAPN3-208ENST00000397204 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.22
CAPN3-208ENST00000397204 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
CAPN3-208ENST00000397204 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-208ENST00000397204 KCNA6P17658 529 aa13.64□□□□□ -0.23
CAPN3-208ENST00000397204 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
CAPN3-208ENST00000397204 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
CAPN3-208ENST00000397204 DAPK1P53355 1430 aa13.63□□□□□ -0.23
CAPN3-208ENST00000397204 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
CAPN3-208ENST00000397204 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-208ENST00000397204 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-208ENST00000397204 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
CAPN3-208ENST00000397204 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
CAPN3-208ENST00000397204 FAM135BQ49AJ0 1406 aa13.6□□□□□ -0.23
CAPN3-208ENST00000397204 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
CAPN3-208ENST00000397204 STRCP1A6NGW2 1772 aa13.6□□□□□ -0.23
CAPN3-208ENST00000397204 CEP152O94986 1710 aa13.59□□□□□ -0.23
CAPN3-208ENST00000397204 SYNMO15061 1565 aa13.59□□□□□ -0.23
CAPN3-208ENST00000397204 PTPN23Q9H3S7 1636 aa13.59□□□□□ -0.23
CAPN3-208ENST00000397204 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
CAPN3-208ENST00000397204 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
CAPN3-208ENST00000397204 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-208ENST00000397204 NOS1P29475 1434 aa13.57□□□□□ -0.24
CAPN3-208ENST00000397204 BCANQ96GW7 911 aa13.57□□□□□ -0.24
CAPN3-208ENST00000397204 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CAPN3-208ENST00000397204 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
CAPN3-208ENST00000397204 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
CAPN3-208ENST00000397204 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-208ENST00000397204 PIK3C2BO00750 1634 aa13.54□□□□□ -0.24
CAPN3-208ENST00000397204 TET3O43151 1660 aa13.53□□□□□ -0.24
CAPN3-208ENST00000397204 POTEHQ6S545 545 aa13.53□□□□□ -0.24
CAPN3-208ENST00000397204 RBM33Q96EV2 1170 aaKnown RBP13.53□□□□□ -0.24
CAPN3-208ENST00000397204 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
CAPN3-208ENST00000397204 TBX22Q9Y458 520 aa13.53□□□□□ -0.24
CAPN3-208ENST00000397204 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.25
CAPN3-208ENST00000397204 ANKRD50Q9ULJ7 1429 aa13.52□□□□□ -0.25
CAPN3-208ENST00000397204 ADGRL2O95490 1459 aa13.52□□□□□ -0.25
CAPN3-208ENST00000397204 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
CAPN3-208ENST00000397204 KDM5AP29375 1690 aaKnown RBP13.52□□□□□ -0.25
CAPN3-208ENST00000397204 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
CAPN3-208ENST00000397204 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CAPN3-208ENST00000397204 MSH6P52701 1360 aa13.5□□□□□ -0.25
CAPN3-208ENST00000397204 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-208ENST00000397204 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
CAPN3-208ENST00000397204 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
CAPN3-208ENST00000397204 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
CAPN3-208ENST00000397204 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CAPN3-208ENST00000397204 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
CAPN3-208ENST00000397204 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
CAPN3-208ENST00000397204 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
CAPN3-208ENST00000397204 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
CAPN3-208ENST00000397204 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
CAPN3-208ENST00000397204 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
CAPN3-208ENST00000397204 C19orf44Q9H6X5 657 aa13.45□□□□□ -0.26
CAPN3-208ENST00000397204 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
CAPN3-208ENST00000397204 JCADQ9P266 1359 aa13.44□□□□□ -0.26
CAPN3-208ENST00000397204 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAPN3-208ENST00000397204 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
CAPN3-208ENST00000397204 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
CAPN3-208ENST00000397204 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
CAPN3-208ENST00000397204 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
CAPN3-208ENST00000397204 ATF3P18847 181 aa13.42□□□□□ -0.26
CAPN3-208ENST00000397204 ROBO1Q9Y6N7 1651 aa13.41□□□□□ -0.26
CAPN3-208ENST00000397204 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-208ENST00000397204 PROM2Q8N271 834 aa13.41□□□□□ -0.26
CAPN3-208ENST00000397204 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
CAPN3-208ENST00000397204 NUP155O75694 1391 aa13.4□□□□□ -0.26
CAPN3-208ENST00000397204 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
CAPN3-208ENST00000397204 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
CAPN3-208ENST00000397204 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
CAPN3-208ENST00000397204 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
CAPN3-208ENST00000397204 CHD2O14647 1828 aaKnown RBP13.38□□□□□ -0.27
CAPN3-208ENST00000397204 ZNF772Q68DY9 489 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-208ENST00000397204 ITGAEP38570 1179 aa13.36□□□□□ -0.27
CAPN3-208ENST00000397204 MEX3CQ5U5Q3 659 aaKnown RBP13.35□□□□□ -0.27
CAPN3-208ENST00000397204 UNC13BO14795 1591 aa13.34□□□□□ -0.27
CAPN3-208ENST00000397204 BRINP3Q76B58 766 aa13.34□□□□□ -0.27
CAPN3-208ENST00000397204 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
CAPN3-208ENST00000397204 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
CAPN3-208ENST00000397204 PHLPP1O60346 1717 aa13.33□□□□□ -0.28
CAPN3-208ENST00000397204 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
CAPN3-208ENST00000397204 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
CAPN3-208ENST00000397204 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
CAPN3-208ENST00000397204 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
CAPN3-208ENST00000397204 MYO5BQ9ULV0 1848 aa13.31□□□□□ -0.28
CAPN3-208ENST00000397204 E9PCH4 1651 aa13.31□□□□□ -0.28
CAPN3-208ENST00000397204 TRPM2O94759 1503 aa13.3□□□□□ -0.28
CAPN3-208ENST00000397204 RXRBP28702 533 aa13.3□□□□□ -0.28
CAPN3-208ENST00000397204 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms