RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 MLECQ14165 292 aa13.08□□□□□ -0.32
APTX-207ENST00000397172 GGT6Q6P531 493 aa13.08□□□□□ -0.32
APTX-207ENST00000397172 MRS2Q9HD23 443 aa13.08□□□□□ -0.32
APTX-207ENST00000397172 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
APTX-207ENST00000397172 KDM4FA0A1W2PPD8 638 aa13.06□□□□□ -0.32
APTX-207ENST00000397172 BRPF3Q9ULD4 1205 aa13.06□□□□□ -0.32
APTX-207ENST00000397172 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
APTX-207ENST00000397172 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
APTX-207ENST00000397172 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
APTX-207ENST00000397172 ESF1Q9H501 851 aaKnown RBP13.05□□□□□ -0.32
APTX-207ENST00000397172 PRDM15P57071 1507 aaPredicted RBP13.05□□□□□ -0.32
APTX-207ENST00000397172 KDM5DQ9BY66 1539 aa13.04□□□□□ -0.32
APTX-207ENST00000397172 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.32
APTX-207ENST00000397172 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
APTX-207ENST00000397172 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
APTX-207ENST00000397172 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
APTX-207ENST00000397172 MADDQ8WXG6 1647 aa13.03□□□□□ -0.32
APTX-207ENST00000397172 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
APTX-207ENST00000397172 KANK1Q14678 1352 aa13.03□□□□□ -0.32
APTX-207ENST00000397172 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.32
APTX-207ENST00000397172 PDE4AP27815 886 aa13.02□□□□□ -0.32
APTX-207ENST00000397172 RRP9O43818 475 aaKnown RBP13.02□□□□□ -0.33
APTX-207ENST00000397172 L1TD1Q5T7N2 865 aaKnown RBP13.02□□□□□ -0.33
APTX-207ENST00000397172 UNC13BO14795 1591 aa13.01□□□□□ -0.33
APTX-207ENST00000397172 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
APTX-207ENST00000397172 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
APTX-207ENST00000397172 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
APTX-207ENST00000397172 MROH2AA6NES4 1674 aa13□□□□□ -0.33
APTX-207ENST00000397172 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
APTX-207ENST00000397172 ABCC3O15438 1527 aa13□□□□□ -0.33
APTX-207ENST00000397172 PTPRMP28827 1452 aa13□□□□□ -0.33
APTX-207ENST00000397172 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
APTX-207ENST00000397172 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
APTX-207ENST00000397172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
APTX-207ENST00000397172 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
APTX-207ENST00000397172 CLTCQ00610 1675 aaKnown RBP12.98□□□□□ -0.33
APTX-207ENST00000397172 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
APTX-207ENST00000397172 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
APTX-207ENST00000397172 NUP155O75694 1391 aa12.97□□□□□ -0.33
APTX-207ENST00000397172 HSP90AA1P07900 732 aaKnown RBP12.96□□□□□ -0.33
APTX-207ENST00000397172 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
APTX-207ENST00000397172 IQGAP3Q86VI3 1631 aa12.96□□□□□ -0.33
APTX-207ENST00000397172 HSPA5P11021 654 aaKnown RBP12.96□□□□□ -0.34
APTX-207ENST00000397172 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.34
APTX-207ENST00000397172 ZMYND15Q9H091 742 aa12.96□□□□□ -0.34
APTX-207ENST00000397172 PZPP20742 1482 aa12.95□□□□□ -0.34
APTX-207ENST00000397172 CEP152O94986 1710 aa12.94□□□□□ -0.34
APTX-207ENST00000397172 NPATQ14207 1427 aa12.94□□□□□ -0.34
APTX-207ENST00000397172 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
APTX-207ENST00000397172 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
APTX-207ENST00000397172 C3P01024 1663 aa12.93□□□□□ -0.34
APTX-207ENST00000397172 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
APTX-207ENST00000397172 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
APTX-207ENST00000397172 TET3O43151 1660 aa12.93□□□□□ -0.34
APTX-207ENST00000397172 EFCAB6Q5THR3 1501 aa12.93□□□□□ -0.34
APTX-207ENST00000397172 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
APTX-207ENST00000397172 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
APTX-207ENST00000397172 SPATA31D1Q6ZQQ2 1576 aa12.89□□□□□ -0.35
APTX-207ENST00000397172 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
APTX-207ENST00000397172 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
APTX-207ENST00000397172 RRP1P56182 461 aaKnown RBP12.88□□□□□ -0.35
APTX-207ENST00000397172 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
APTX-207ENST00000397172 MPHOSPH9Q99550 1183 aa12.88□□□□□ -0.35
APTX-207ENST00000397172 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
APTX-207ENST00000397172 ERVK-7P63135 1459 aa12.88□□□□□ -0.35
APTX-207ENST00000397172 NOS1P29475 1434 aa12.88□□□□□ -0.35
APTX-207ENST00000397172 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
APTX-207ENST00000397172 TNRQ92752 1358 aa12.87□□□□□ -0.35
APTX-207ENST00000397172 E9PCH4 1651 aa12.87□□□□□ -0.35
APTX-207ENST00000397172 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
APTX-207ENST00000397172 PKD2Q13563 968 aa12.86□□□□□ -0.35
APTX-207ENST00000397172 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
APTX-207ENST00000397172 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
APTX-207ENST00000397172 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
APTX-207ENST00000397172 PTPRTO14522 1441 aa12.85□□□□□ -0.35
APTX-207ENST00000397172 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
APTX-207ENST00000397172 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
APTX-207ENST00000397172 UHRF1BP1Q6BDS2 1440 aa12.84□□□□□ -0.35
APTX-207ENST00000397172 CLCN1P35523 988 aa12.82□□□□□ -0.36
APTX-207ENST00000397172 CFAP65Q6ZU64 1925 aaKnown RBP12.82□□□□□ -0.36
APTX-207ENST00000397172 MYO3AQ8NEV4 1616 aa12.82□□□□□ -0.36
APTX-207ENST00000397172 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
APTX-207ENST00000397172 SYNMO15061 1565 aa12.81□□□□□ -0.36
APTX-207ENST00000397172 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
APTX-207ENST00000397172 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
APTX-207ENST00000397172 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
APTX-207ENST00000397172 TRPM2O94759 1503 aa12.8□□□□□ -0.36
APTX-207ENST00000397172 BECN1Q14457 450 aa12.8□□□□□ -0.36
APTX-207ENST00000397172 SPHKAPQ2M3C7 1700 aa12.8□□□□□ -0.36
APTX-207ENST00000397172 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
APTX-207ENST00000397172 LMTK3Q96Q04 1460 aa12.8□□□□□ -0.36
APTX-207ENST00000397172 TPM2P07951 284 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 IDI1Q13907 227 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 FAM161AQ3B820 660 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 CEP170BQ9Y4F5 1589 aaPredicted RBP12.79□□□□□ -0.36
APTX-207ENST00000397172 PLA2R1Q13018 1463 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 EXOC6Q8TAG9 804 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
APTX-207ENST00000397172 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms