RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
TRIM40-207ENST00000396581 PER1O15534 1290 aaPredicted RBP17.73■□□□□ 0.43
TRIM40-207ENST00000396581 MS4A1P11836 297 aa17.73■□□□□ 0.43
TRIM40-207ENST00000396581 NBR1Q14596 966 aa17.73■□□□□ 0.43
TRIM40-207ENST00000396581 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
TRIM40-207ENST00000396581 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
TRIM40-207ENST00000396581 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
TRIM40-207ENST00000396581 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
TRIM40-207ENST00000396581 PTPRTO14522 1441 aa17.71■□□□□ 0.43
TRIM40-207ENST00000396581 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
TRIM40-207ENST00000396581 TET3O43151 1660 aa17.71■□□□□ 0.43
TRIM40-207ENST00000396581 COL17A1Q9UMD9 1497 aaPredicted RBP17.71■□□□□ 0.43
TRIM40-207ENST00000396581 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
TRIM40-207ENST00000396581 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
TRIM40-207ENST00000396581 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
TRIM40-207ENST00000396581 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
TRIM40-207ENST00000396581 BACH2Q9BYV9 841 aa17.68■□□□□ 0.42
TRIM40-207ENST00000396581 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
TRIM40-207ENST00000396581 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
TRIM40-207ENST00000396581 PDE4AP27815 886 aa17.67■□□□□ 0.42
TRIM40-207ENST00000396581 KIF13AQ9H1H9 1805 aa17.66■□□□□ 0.42
TRIM40-207ENST00000396581 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
TRIM40-207ENST00000396581 TRPM2O94759 1503 aa17.66■□□□□ 0.42
TRIM40-207ENST00000396581 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
TRIM40-207ENST00000396581 EFCAB6Q5THR3 1501 aa17.64■□□□□ 0.41
TRIM40-207ENST00000396581 GGT6Q6P531 493 aa17.64■□□□□ 0.41
TRIM40-207ENST00000396581 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
TRIM40-207ENST00000396581 TESK2Q96S53 571 aa17.63■□□□□ 0.41
TRIM40-207ENST00000396581 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
TRIM40-207ENST00000396581 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
TRIM40-207ENST00000396581 CDCA7LQ96GN5 454 aa17.6■□□□□ 0.41
TRIM40-207ENST00000396581 DISP3Q9P2K9 1392 aa17.6■□□□□ 0.41
TRIM40-207ENST00000396581 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
TRIM40-207ENST00000396581 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
TRIM40-207ENST00000396581 ABCC3O15438 1527 aa17.58■□□□□ 0.41
TRIM40-207ENST00000396581 NPATQ14207 1427 aa17.58■□□□□ 0.41
TRIM40-207ENST00000396581 NEURL4Q96JN8 1562 aa17.57■□□□□ 0.4
TRIM40-207ENST00000396581 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
TRIM40-207ENST00000396581 CEP152O94986 1710 aa17.57■□□□□ 0.4
TRIM40-207ENST00000396581 REREQ9P2R6 1566 aa17.56■□□□□ 0.4
TRIM40-207ENST00000396581 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
TRIM40-207ENST00000396581 ARHGAP31Q2M1Z3 1444 aa17.54■□□□□ 0.4
TRIM40-207ENST00000396581 PANK3Q9H999 370 aa17.54■□□□□ 0.4
TRIM40-207ENST00000396581 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
TRIM40-207ENST00000396581 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
TRIM40-207ENST00000396581 CRBNQ96SW2 442 aa17.53■□□□□ 0.4
TRIM40-207ENST00000396581 AGLP35573 1532 aa17.53■□□□□ 0.4
TRIM40-207ENST00000396581 TMF1P82094 1093 aa17.52■□□□□ 0.4
TRIM40-207ENST00000396581 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
TRIM40-207ENST00000396581 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.39
TRIM40-207ENST00000396581 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
TRIM40-207ENST00000396581 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
TRIM40-207ENST00000396581 PLIN1O60240 522 aa17.51■□□□□ 0.39
TRIM40-207ENST00000396581 NOS1P29475 1434 aa17.5■□□□□ 0.39
TRIM40-207ENST00000396581 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
TRIM40-207ENST00000396581 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
TRIM40-207ENST00000396581 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
TRIM40-207ENST00000396581 ZNF521Q96K83 1311 aa17.5■□□□□ 0.39
TRIM40-207ENST00000396581 NEFMP07197 916 aa17.48■□□□□ 0.39
TRIM40-207ENST00000396581 IQGAP1P46940 1657 aa17.47■□□□□ 0.39
TRIM40-207ENST00000396581 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
TRIM40-207ENST00000396581 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
TRIM40-207ENST00000396581 ADAMTS8Q9UP79 889 aa17.46■□□□□ 0.39
TRIM40-207ENST00000396581 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
TRIM40-207ENST00000396581 KIF1BO60333 1816 aa17.45■□□□□ 0.38
TRIM40-207ENST00000396581 SYNMO15061 1565 aa17.45■□□□□ 0.38
TRIM40-207ENST00000396581 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
TRIM40-207ENST00000396581 LAS1LQ9Y4W2 734 aaKnown RBP17.45■□□□□ 0.38
TRIM40-207ENST00000396581 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
TRIM40-207ENST00000396581 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
TRIM40-207ENST00000396581 CFAP65Q6ZU64 1925 aaKnown RBP17.44■□□□□ 0.38
TRIM40-207ENST00000396581 ADGRB3O60242 1522 aa17.44■□□□□ 0.38
TRIM40-207ENST00000396581 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
TRIM40-207ENST00000396581 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
TRIM40-207ENST00000396581 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
TRIM40-207ENST00000396581 MYOM2P54296 1465 aa17.43■□□□□ 0.38
TRIM40-207ENST00000396581 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
TRIM40-207ENST00000396581 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
TRIM40-207ENST00000396581 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
TRIM40-207ENST00000396581 PIK3C2BO00750 1634 aa17.41■□□□□ 0.38
TRIM40-207ENST00000396581 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
TRIM40-207ENST00000396581 RPGRIP1LQ68CZ1 1315 aa17.41■□□□□ 0.38
TRIM40-207ENST00000396581 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
TRIM40-207ENST00000396581 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
TRIM40-207ENST00000396581 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.38
TRIM40-207ENST00000396581 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.38
TRIM40-207ENST00000396581 IDI1Q13907 227 aa17.39■□□□□ 0.37
TRIM40-207ENST00000396581 C8orf34Q49A92 452 aa17.39■□□□□ 0.37
TRIM40-207ENST00000396581 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
TRIM40-207ENST00000396581 GOLGA2Q08379 1002 aa17.38■□□□□ 0.37
TRIM40-207ENST00000396581 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
TRIM40-207ENST00000396581 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
TRIM40-207ENST00000396581 MROH2AA6NES4 1674 aa17.38■□□□□ 0.37
TRIM40-207ENST00000396581 SCAF11Q99590 1463 aaKnown RBP17.38■□□□□ 0.37
TRIM40-207ENST00000396581 MYOM1P52179 1685 aa17.38■□□□□ 0.37
TRIM40-207ENST00000396581 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
TRIM40-207ENST00000396581 IFT172Q9UG01 1749 aa17.37■□□□□ 0.37
TRIM40-207ENST00000396581 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
TRIM40-207ENST00000396581 SLFN5Q08AF3 891 aa17.37■□□□□ 0.37
TRIM40-207ENST00000396581 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms