RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
TRIM39-203ENST00000396547 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
TRIM39-203ENST00000396547 USP35Q9P2H5 1018 aa12.96□□□□□ -0.33
TRIM39-203ENST00000396547 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
TRIM39-203ENST00000396547 RGS3P49796 1198 aa12.96□□□□□ -0.33
TRIM39-203ENST00000396547 DCAF11Q8TEB1 546 aa12.95□□□□□ -0.34
TRIM39-203ENST00000396547 RPRD2Q5VT52 1461 aaKnown RBP12.95□□□□□ -0.34
TRIM39-203ENST00000396547 ARXQ96QS3 562 aa12.95□□□□□ -0.34
TRIM39-203ENST00000396547 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-203ENST00000396547 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
TRIM39-203ENST00000396547 C20orf194Q5TEA3 1177 aa12.94□□□□□ -0.34
TRIM39-203ENST00000396547 MYBBP1AQ9BQG0 1328 aaKnown RBP12.94□□□□□ -0.34
TRIM39-203ENST00000396547 A2MP01023 1474 aa12.94□□□□□ -0.34
TRIM39-203ENST00000396547 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
TRIM39-203ENST00000396547 DDRGK1Q96HY6 314 aa12.93□□□□□ -0.34
TRIM39-203ENST00000396547 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
TRIM39-203ENST00000396547 MS4A1P11836 297 aa12.92□□□□□ -0.34
TRIM39-203ENST00000396547 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
TRIM39-203ENST00000396547 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
TRIM39-203ENST00000396547 PTPRMP28827 1452 aa12.91□□□□□ -0.34
TRIM39-203ENST00000396547 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
TRIM39-203ENST00000396547 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
TRIM39-203ENST00000396547 C3P01024 1663 aa12.9□□□□□ -0.34
TRIM39-203ENST00000396547 VWDEQ8N2E2 1590 aa12.9□□□□□ -0.34
TRIM39-203ENST00000396547 WASHC2CQ9Y4E1 1318 aa12.9□□□□□ -0.34
TRIM39-203ENST00000396547 RALBP1Q15311 655 aa12.9□□□□□ -0.34
TRIM39-203ENST00000396547 ZNF142P52746 1687 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-203ENST00000396547 PREX1Q8TCU6 1659 aa12.9□□□□□ -0.34
TRIM39-203ENST00000396547 ERBINQ96RT1 1412 aa12.9□□□□□ -0.35
TRIM39-203ENST00000396547 ABCC5O15440 1437 aa12.89□□□□□ -0.35
TRIM39-203ENST00000396547 DAPK1P53355 1430 aa12.89□□□□□ -0.35
TRIM39-203ENST00000396547 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-203ENST00000396547 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
TRIM39-203ENST00000396547 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
TRIM39-203ENST00000396547 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
TRIM39-203ENST00000396547 NPATQ14207 1427 aa12.88□□□□□ -0.35
TRIM39-203ENST00000396547 AFAP1Q8N556 730 aa12.87□□□□□ -0.35
TRIM39-203ENST00000396547 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
TRIM39-203ENST00000396547 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
TRIM39-203ENST00000396547 UBE2Q2Q8WVN8 375 aa12.86□□□□□ -0.35
TRIM39-203ENST00000396547 UNC13BO14795 1591 aa12.85□□□□□ -0.35
TRIM39-203ENST00000396547 KTN1Q86UP2 1357 aaKnown RBP12.85□□□□□ -0.35
TRIM39-203ENST00000396547 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
TRIM39-203ENST00000396547 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
TRIM39-203ENST00000396547 NUP155O75694 1391 aa12.84□□□□□ -0.35
TRIM39-203ENST00000396547 SETD1BQ9UPS6 1966 aaKnown RBP12.84□□□□□ -0.35
TRIM39-203ENST00000396547 LRPPRCP42704 1394 aaKnown RBP12.84□□□□□ -0.35
TRIM39-203ENST00000396547 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
TRIM39-203ENST00000396547 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
TRIM39-203ENST00000396547 HNRNPMP52272 730 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM39-203ENST00000396547 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
TRIM39-203ENST00000396547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■■■□ 21.3
TRIM39-203ENST00000396547 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
TRIM39-203ENST00000396547 PANK3Q9H999 370 aa12.82□□□□□ -0.36
TRIM39-203ENST00000396547 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
TRIM39-203ENST00000396547 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
TRIM39-203ENST00000396547 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
TRIM39-203ENST00000396547 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
TRIM39-203ENST00000396547 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
TRIM39-203ENST00000396547 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
TRIM39-203ENST00000396547 ABCC3O15438 1527 aa12.79□□□□□ -0.36
TRIM39-203ENST00000396547 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
TRIM39-203ENST00000396547 PZPP20742 1482 aa12.79□□□□□ -0.36
TRIM39-203ENST00000396547 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
TRIM39-203ENST00000396547 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
TRIM39-203ENST00000396547 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
TRIM39-203ENST00000396547 POLR1AO95602 1720 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-203ENST00000396547 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM39-203ENST00000396547 MYO3AQ8NEV4 1616 aa12.78□□□□□ -0.36
TRIM39-203ENST00000396547 C8orf34Q49A92 452 aa12.77□□□□□ -0.36
TRIM39-203ENST00000396547 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.36
TRIM39-203ENST00000396547 IQGAP3Q86VI3 1631 aa12.77□□□□□ -0.37
TRIM39-203ENST00000396547 POGKQ9P215 609 aa12.77□□□□□ -0.37
TRIM39-203ENST00000396547 ANKRD30AQ9BXX3 1397 aa12.76□□□□□ -0.37
TRIM39-203ENST00000396547 TET3O43151 1660 aa12.75□□□□□ -0.37
TRIM39-203ENST00000396547 TSPY4P0CV99 314 aa12.75□□□□□ -0.37
TRIM39-203ENST00000396547 TSPY10P0CW01 314 aa12.75□□□□□ -0.37
TRIM39-203ENST00000396547 CEP152O94986 1710 aa12.75□□□□□ -0.37
TRIM39-203ENST00000396547 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
TRIM39-203ENST00000396547 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
TRIM39-203ENST00000396547 BCAR3O75815 825 aa12.73□□□□□ -0.37
TRIM39-203ENST00000396547 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
TRIM39-203ENST00000396547 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-203ENST00000396547 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
TRIM39-203ENST00000396547 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
TRIM39-203ENST00000396547 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
TRIM39-203ENST00000396547 KDM2BQ8NHM5 1336 aa12.72□□□□□ -0.37
TRIM39-203ENST00000396547 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
TRIM39-203ENST00000396547 SEC24BO95487 1268 aa12.71□□□□□ -0.37
TRIM39-203ENST00000396547 NLRP1Q9C000 1473 aa12.71□□□□□ -0.38
TRIM39-203ENST00000396547 DUSP27Q5VZP5 1158 aa12.71□□□□□ -0.38
TRIM39-203ENST00000396547 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.38
TRIM39-203ENST00000396547 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
TRIM39-203ENST00000396547 STRCQ7RTU9 1775 aa12.7□□□□□ -0.38
TRIM39-203ENST00000396547 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
TRIM39-203ENST00000396547 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
TRIM39-203ENST00000396547 CEP170BQ9Y4F5 1589 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-203ENST00000396547 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
TRIM39-203ENST00000396547 AEBP2Q6ZN18 517 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-203ENST00000396547 IGHDP01880 384 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms