RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.22■□□□□ 0.03
PDXDC1-202ENST00000396410 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDXDC1-202ENST00000396410 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
PDXDC1-202ENST00000396410 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
PDXDC1-202ENST00000396410 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.02
PDXDC1-202ENST00000396410 TMEM132EQ6IEE7 984 aa15.2■□□□□ 0.02
PDXDC1-202ENST00000396410 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
PDXDC1-202ENST00000396410 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
PDXDC1-202ENST00000396410 PTPRTO14522 1441 aa15.19■□□□□ 0.02
PDXDC1-202ENST00000396410 E9PCH4 1651 aa15.19■□□□□ 0.02
PDXDC1-202ENST00000396410 STK26Q9P289 416 aa15.19■□□□□ 0.02
PDXDC1-202ENST00000396410 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
PDXDC1-202ENST00000396410 PLIN1O60240 522 aa15.18■□□□□ 0.02
PDXDC1-202ENST00000396410 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
PDXDC1-202ENST00000396410 ABCA9Q8IUA7 1624 aa15.17■□□□□ 0.02
PDXDC1-202ENST00000396410 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
PDXDC1-202ENST00000396410 NOS1P29475 1434 aa15.17■□□□□ 0.02
PDXDC1-202ENST00000396410 TET3O43151 1660 aa15.17■□□□□ 0.02
PDXDC1-202ENST00000396410 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
PDXDC1-202ENST00000396410 NEUROD2Q15784 382 aa15.16■□□□□ 0.02
PDXDC1-202ENST00000396410 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
PDXDC1-202ENST00000396410 POGKQ9P215 609 aa15.15■□□□□ 0.02
PDXDC1-202ENST00000396410 SPHKAPQ2M3C7 1700 aa15.15■□□□□ 0.02
PDXDC1-202ENST00000396410 CLTCL1P53675 1640 aa15.15■□□□□ 0.02
PDXDC1-202ENST00000396410 SRPK2P78362 688 aaKnown RBP15.15■□□□□ 0.02
PDXDC1-202ENST00000396410 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
PDXDC1-202ENST00000396410 LAMC1P11047 1609 aa15.14■□□□□ 0.01
PDXDC1-202ENST00000396410 UGGT1Q9NYU2 1555 aa15.14■□□□□ 0.01
PDXDC1-202ENST00000396410 RPGRIP1LQ68CZ1 1315 aa15.13■□□□□ 0.01
PDXDC1-202ENST00000396410 APAF1O14727 1248 aa15.13■□□□□ 0.01
PDXDC1-202ENST00000396410 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 MLECQ14165 292 aa15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 MADDQ8WXG6 1647 aa15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
PDXDC1-202ENST00000396410 SLC12A5Q9H2X9 1139 aa15.11■□□□□ 0.01
PDXDC1-202ENST00000396410 ASXL1Q8IXJ9 1541 aa15.11■□□□□ 0.01
PDXDC1-202ENST00000396410 CRBNQ96SW2 442 aa15.1■□□□□ 0.01
PDXDC1-202ENST00000396410 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
PDXDC1-202ENST00000396410 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
PDXDC1-202ENST00000396410 CGNL1Q0VF96 1302 aa15.08■□□□□ 0.01
PDXDC1-202ENST00000396410 CEP152O94986 1710 aa15.08■□□□□ 0.01
PDXDC1-202ENST00000396410 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
PDXDC1-202ENST00000396410 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
PDXDC1-202ENST00000396410 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
PDXDC1-202ENST00000396410 NPATQ14207 1427 aa15.07■□□□□ 0
PDXDC1-202ENST00000396410 KIF1BO60333 1816 aa15.07■□□□□ 0
PDXDC1-202ENST00000396410 CABP2Q9NPB3 220 aa15.06■□□□□ 0
PDXDC1-202ENST00000396410 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
PDXDC1-202ENST00000396410 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
PDXDC1-202ENST00000396410 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
PDXDC1-202ENST00000396410 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
PDXDC1-202ENST00000396410 MYOM2P54296 1465 aa15.06■□□□□ 0
PDXDC1-202ENST00000396410 IDI1Q13907 227 aa15.05■□□□□ 0
PDXDC1-202ENST00000396410 DEPDC5O75140 1603 aa15.05■□□□□ -0
PDXDC1-202ENST00000396410 NSD3Q9BZ95 1437 aa15.05■□□□□ -0
PDXDC1-202ENST00000396410 MLH3Q9UHC1 1453 aa15.05■□□□□ -0
PDXDC1-202ENST00000396410 BLMP54132 1417 aaPredicted RBP15.05■□□□□ -0
PDXDC1-202ENST00000396410 RNF17Q9BXT8 1623 aaKnown RBP15.04■□□□□ -0
PDXDC1-202ENST00000396410 E9PSI1 815 aa15.04■□□□□ -0
PDXDC1-202ENST00000396410 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
PDXDC1-202ENST00000396410 NEFMP07197 916 aa15.04■□□□□ -0
PDXDC1-202ENST00000396410 MINK1Q8N4C8 1332 aaPredicted RBP15.04■□□□□ -0
PDXDC1-202ENST00000396410 SYNMO15061 1565 aa15.04■□□□□ -0
PDXDC1-202ENST00000396410 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
PDXDC1-202ENST00000396410 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
PDXDC1-202ENST00000396410 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
PDXDC1-202ENST00000396410 RRP7AQ9Y3A4 280 aaKnown RBP15.04■□□□□ -0
PDXDC1-202ENST00000396410 KDM5AP29375 1690 aaKnown RBP15.03■□□□□ -0
PDXDC1-202ENST00000396410 MAP3K4Q9Y6R4 1608 aa15.03■□□□□ -0
PDXDC1-202ENST00000396410 HECW2Q9P2P5 1572 aa15.03■□□□□ -0
PDXDC1-202ENST00000396410 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
PDXDC1-202ENST00000396410 KIDINS220Q9ULH0 1771 aa15.02■□□□□ -0
PDXDC1-202ENST00000396410 NOP58Q9Y2X3 529 aaKnown RBP15.02■□□□□ -0
PDXDC1-202ENST00000396410 INSRP06213 1382 aa15.02■□□□□ -0
PDXDC1-202ENST00000396410 PIK3C2GO75747 1445 aa15.02■□□□□ -0
PDXDC1-202ENST00000396410 NEO1Q92859 1461 aa15.02■□□□□ -0
PDXDC1-202ENST00000396410 TERF2IPQ9NYB0 399 aa15.02□□□□□ -0.01
PDXDC1-202ENST00000396410 NPC1L1Q9UHC9 1359 aa15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 VWDEQ8N2E2 1590 aa15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 MTHFSP49914 203 aa15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 IQGAP1P46940 1657 aa15.01□□□□□ -0.01
PDXDC1-202ENST00000396410 PPRC1Q5VV67 1664 aaKnown RBP15□□□□□ -0.01
PDXDC1-202ENST00000396410 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
PDXDC1-202ENST00000396410 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
PDXDC1-202ENST00000396410 MAPK8IP3Q9UPT6 1336 aa15□□□□□ -0.01
PDXDC1-202ENST00000396410 SLFN5Q08AF3 891 aa15□□□□□ -0.01
PDXDC1-202ENST00000396410 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
PDXDC1-202ENST00000396410 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
PDXDC1-202ENST00000396410 MSH5O43196 834 aa14.99□□□□□ -0.01
PDXDC1-202ENST00000396410 RUNDC1Q96C34 613 aa14.99□□□□□ -0.01
PDXDC1-202ENST00000396410 ZMYM4Q5VZL5 1548 aa14.99□□□□□ -0.01
PDXDC1-202ENST00000396410 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
PDXDC1-202ENST00000396410 FBXO31Q5XUX0 539 aaPredicted RBP14.98□□□□□ -0.01
PDXDC1-202ENST00000396410 PRAM1Q96QH2 718 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms