RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.52
MSH5-205ENST00000395853 RRAGDQ9NQL2 400 aaPredicted RBP11.77□□□□□ -0.52
MSH5-205ENST00000395853 MYO3AQ8NEV4 1616 aa11.77□□□□□ -0.53
MSH5-205ENST00000395853 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
MSH5-205ENST00000395853 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
MSH5-205ENST00000395853 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
MSH5-205ENST00000395853 TRIM52Q96A61 297 aa11.77□□□□□ -0.53
MSH5-205ENST00000395853 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
MSH5-205ENST00000395853 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
MSH5-205ENST00000395853 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
MSH5-205ENST00000395853 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
MSH5-205ENST00000395853 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
MSH5-205ENST00000395853 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
MSH5-205ENST00000395853 TEX2Q8IWB9 1127 aa11.75□□□□□ -0.53
MSH5-205ENST00000395853 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
MSH5-205ENST00000395853 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
MSH5-205ENST00000395853 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
MSH5-205ENST00000395853 A2MP01023 1474 aa11.75□□□□□ -0.53
MSH5-205ENST00000395853 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
MSH5-205ENST00000395853 ZNF335Q9H4Z2 1342 aaPredicted RBP11.75□□□□□ -0.53
MSH5-205ENST00000395853 DCAF11Q8TEB1 546 aa11.74□□□□□ -0.53
MSH5-205ENST00000395853 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
MSH5-205ENST00000395853 PTPN23Q9H3S7 1636 aa11.73□□□□□ -0.53
MSH5-205ENST00000395853 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
MSH5-205ENST00000395853 FAM135AQ9P2D6 1515 aa11.73□□□□□ -0.53
MSH5-205ENST00000395853 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
MSH5-205ENST00000395853 CPS1P31327 1500 aa11.72□□□□□ -0.53
MSH5-205ENST00000395853 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
MSH5-205ENST00000395853 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
MSH5-205ENST00000395853 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.54
MSH5-205ENST00000395853 SECISBP2LQ93073 1101 aaKnown RBP11.71□□□□□ -0.54
MSH5-205ENST00000395853 HNRNPMP52272 730 aaKnown RBP eCLIP11.7□□□□□ -0.54
MSH5-205ENST00000395853 RTEL1-TNFRSF6BF6WH68 1400 aa11.7□□□□□ -0.54
MSH5-205ENST00000395853 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
MSH5-205ENST00000395853 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
MSH5-205ENST00000395853 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
MSH5-205ENST00000395853 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
MSH5-205ENST00000395853 TOM1O60784 492 aa11.68□□□□□ -0.54
MSH5-205ENST00000395853 FOXD1Q16676 465 aa11.68□□□□□ -0.54
MSH5-205ENST00000395853 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
MSH5-205ENST00000395853 HFM1A2PYH4 1435 aa11.68□□□□□ -0.54
MSH5-205ENST00000395853 POLR1AO95602 1720 aaPredicted RBP11.68□□□□□ -0.54
MSH5-205ENST00000395853 CLCN1P35523 988 aa11.67□□□□□ -0.54
MSH5-205ENST00000395853 CHIC2Q9UKJ5 165 aa11.67□□□□□ -0.54
MSH5-205ENST00000395853 NAIPQ13075 1403 aa11.67□□□□□ -0.54
MSH5-205ENST00000395853 MED1Q15648 1581 aaPredicted RBP11.67□□□□□ -0.54
MSH5-205ENST00000395853 GGT6Q6P531 493 aa11.67□□□□□ -0.54
MSH5-205ENST00000395853 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
MSH5-205ENST00000395853 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
MSH5-205ENST00000395853 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
MSH5-205ENST00000395853 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
MSH5-205ENST00000395853 DHX29Q7Z478 1369 aaKnown RBP11.66□□□□□ -0.54
MSH5-205ENST00000395853 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
MSH5-205ENST00000395853 NEURL4Q96JN8 1562 aa11.65□□□□□ -0.54
MSH5-205ENST00000395853 NFKBIBQ15653 356 aa11.65□□□□□ -0.54
MSH5-205ENST00000395853 PZPP20742 1482 aa11.65□□□□□ -0.54
MSH5-205ENST00000395853 TNRQ92752 1358 aa11.64□□□□□ -0.55
MSH5-205ENST00000395853 MBD5Q9P267 1494 aa11.64□□□□□ -0.55
MSH5-205ENST00000395853 MED14O60244 1454 aa11.64□□□□□ -0.55
MSH5-205ENST00000395853 MIA2Q96PC5 1412 aa11.64□□□□□ -0.55
MSH5-205ENST00000395853 HSPA1LP34931 641 aa11.64□□□□□ -0.55
MSH5-205ENST00000395853 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
MSH5-205ENST00000395853 ZNF830Q96NB3 372 aaPredicted RBP11.64□□□□□ -0.55
MSH5-205ENST00000395853 DEPDC5O75140 1603 aa11.63□□□□□ -0.55
MSH5-205ENST00000395853 NLRP1Q9C000 1473 aa11.63□□□□□ -0.55
MSH5-205ENST00000395853 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
MSH5-205ENST00000395853 SMAP1Q8IYB5 467 aaPredicted RBP11.63□□□□□ -0.55
MSH5-205ENST00000395853 KDM5DQ9BY66 1539 aa11.63□□□□□ -0.55
MSH5-205ENST00000395853 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
MSH5-205ENST00000395853 ZNF644Q9H582 1327 aaPredicted RBP11.63□□□□□ -0.55
MSH5-205ENST00000395853 TPM2P07951 284 aa11.62□□□□□ -0.55
MSH5-205ENST00000395853 TMEM51Q9NW97 253 aa11.62□□□□□ -0.55
MSH5-205ENST00000395853 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
MSH5-205ENST00000395853 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
MSH5-205ENST00000395853 ZHX1Q9UKY1 873 aaPredicted RBP11.61□□□□□ -0.55
MSH5-205ENST00000395853 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
MSH5-205ENST00000395853 GCC2Q8IWJ2 1684 aa11.6□□□□□ -0.55
MSH5-205ENST00000395853 NPHP4O75161 1426 aaPredicted RBP11.59□□□□□ -0.55
MSH5-205ENST00000395853 PIP4K2BP78356 416 aa11.59□□□□□ -0.55
MSH5-205ENST00000395853 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
MSH5-205ENST00000395853 UGGT1Q9NYU2 1555 aa11.58□□□□□ -0.56
MSH5-205ENST00000395853 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
MSH5-205ENST00000395853 SYNMO15061 1565 aa11.58□□□□□ -0.56
MSH5-205ENST00000395853 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
MSH5-205ENST00000395853 DAPK1P53355 1430 aa11.57□□□□□ -0.56
MSH5-205ENST00000395853 VGLL3A8MV65 326 aa11.57□□□□□ -0.56
MSH5-205ENST00000395853 KIF3BO15066 747 aa11.57□□□□□ -0.56
MSH5-205ENST00000395853 ABCC5O15440 1437 aa11.57□□□□□ -0.56
MSH5-205ENST00000395853 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
MSH5-205ENST00000395853 IQGAP1P46940 1657 aa11.56□□□□□ -0.56
MSH5-205ENST00000395853 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
MSH5-205ENST00000395853 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
MSH5-205ENST00000395853 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
MSH5-205ENST00000395853 ARHGEF5Q12774 1597 aa11.55□□□□□ -0.56
MSH5-205ENST00000395853 CNPY4Q8N129 248 aa11.55□□□□□ -0.56
MSH5-205ENST00000395853 MAP7D2Q96T17 732 aa11.55□□□□□ -0.56
MSH5-205ENST00000395853 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
MSH5-205ENST00000395853 L1TD1Q5T7N2 865 aaKnown RBP11.55□□□□□ -0.56
MSH5-205ENST00000395853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
MSH5-205ENST00000395853 CDK11BP21127 795 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms