RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
PTPN20-208ENST00000395727 SIGLEC1Q9BZZ2 1709 aa9.9□□□□□ -0.83
PTPN20-208ENST00000395727 CEP162Q5TB80 1403 aa9.9□□□□□ -0.83
PTPN20-208ENST00000395727 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.83
PTPN20-208ENST00000395727 LHX8Q68G74 356 aa9.89□□□□□ -0.83
PTPN20-208ENST00000395727 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
PTPN20-208ENST00000395727 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-208ENST00000395727 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
PTPN20-208ENST00000395727 MLH3Q9UHC1 1453 aa9.89□□□□□ -0.83
PTPN20-208ENST00000395727 C9orf84Q5VXU9 1444 aa9.89□□□□□ -0.83
PTPN20-208ENST00000395727 EHBP1L1Q8N3D4 1523 aa9.88□□□□□ -0.83
PTPN20-208ENST00000395727 ATP10AO60312 1499 aa9.88□□□□□ -0.83
PTPN20-208ENST00000395727 KIF3CO14782 793 aa9.88□□□□□ -0.83
PTPN20-208ENST00000395727 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
PTPN20-208ENST00000395727 DIP2CQ9Y2E4 1556 aa9.88□□□□□ -0.83
PTPN20-208ENST00000395727 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
PTPN20-208ENST00000395727 PDE4AP27815 886 aa9.87□□□□□ -0.83
PTPN20-208ENST00000395727 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
PTPN20-208ENST00000395727 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
PTPN20-208ENST00000395727 MFSD10Q14728 455 aa9.86□□□□□ -0.83
PTPN20-208ENST00000395727 SAMD9LQ8IVG5 1584 aa9.86□□□□□ -0.83
PTPN20-208ENST00000395727 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
PTPN20-208ENST00000395727 AGLP35573 1532 aa9.86□□□□□ -0.83
PTPN20-208ENST00000395727 ABCA6Q8N139 1617 aa9.85□□□□□ -0.83
PTPN20-208ENST00000395727 PLEKHH2Q8IVE3 1493 aa9.85□□□□□ -0.83
PTPN20-208ENST00000395727 KIAA1107Q9UPP5 1409 aa9.85□□□□□ -0.83
PTPN20-208ENST00000395727 C2orf72A6NCS6 295 aa9.85□□□□□ -0.83
PTPN20-208ENST00000395727 RIMS1Q86UR5 1692 aaKnown RBP9.85□□□□□ -0.83
PTPN20-208ENST00000395727 TIAM1Q13009 1591 aa9.84□□□□□ -0.83
PTPN20-208ENST00000395727 FER1L4A9Z1Z3 1794 aa9.84□□□□□ -0.83
PTPN20-208ENST00000395727 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
PTPN20-208ENST00000395727 OTUD5Q96G74 571 aa9.84□□□□□ -0.83
PTPN20-208ENST00000395727 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
PTPN20-208ENST00000395727 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
PTPN20-208ENST00000395727 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
PTPN20-208ENST00000395727 MTUS2Q5JR59 1369 aa9.83□□□□□ -0.84
PTPN20-208ENST00000395727 INO80Q9ULG1 1556 aaPredicted RBP9.83□□□□□ -0.84
PTPN20-208ENST00000395727 VPS8Q8N3P4 1428 aa9.82□□□□□ -0.84
PTPN20-208ENST00000395727 MAP3K1Q13233 1512 aa9.82□□□□□ -0.84
PTPN20-208ENST00000395727 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
PTPN20-208ENST00000395727 ARID4BQ4LE39 1312 aaPredicted RBP9.82□□□□□ -0.84
PTPN20-208ENST00000395727 LMTK3Q96Q04 1460 aa9.81□□□□□ -0.84
PTPN20-208ENST00000395727 FOXK1P85037 733 aa9.81□□□□□ -0.84
PTPN20-208ENST00000395727 SUPT6HQ7KZ85 1726 aaKnown RBP9.81□□□□□ -0.84
PTPN20-208ENST00000395727 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
PTPN20-208ENST00000395727 CCNB3Q8WWL7 1395 aa9.8□□□□□ -0.84
PTPN20-208ENST00000395727 DSG2Q14126 1118 aa9.8□□□□□ -0.84
PTPN20-208ENST00000395727 AFAP1Q8N556 730 aa9.8□□□□□ -0.84
PTPN20-208ENST00000395727 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
PTPN20-208ENST00000395727 ATP7AQ04656 1500 aa9.8□□□□□ -0.84
PTPN20-208ENST00000395727 SLAIN1Q8ND83 568 aa9.79□□□□□ -0.84
PTPN20-208ENST00000395727 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
PTPN20-208ENST00000395727 PPP1R15BQ5SWA1 713 aa9.78□□□□□ -0.84
PTPN20-208ENST00000395727 NCOA2Q15596 1464 aa9.78□□□□□ -0.84
PTPN20-208ENST00000395727 MROH2AA6NES4 1674 aa9.77□□□□□ -0.84
PTPN20-208ENST00000395727 PREX1Q8TCU6 1659 aa9.77□□□□□ -0.84
PTPN20-208ENST00000395727 RTEL1-TNFRSF6BF6WH68 1400 aa9.77□□□□□ -0.85
PTPN20-208ENST00000395727 WDR70Q9NW82 654 aa9.77□□□□□ -0.85
PTPN20-208ENST00000395727 CFDP1Q9UEE9 299 aaPredicted RBP9.77□□□□□ -0.85
PTPN20-208ENST00000395727 LRRC9Q6ZRR7 1453 aa9.77□□□□□ -0.85
PTPN20-208ENST00000395727 ADGBQ8N7X0 1667 aa9.77□□□□□ -0.85
PTPN20-208ENST00000395727 ARHGEF5Q12774 1597 aa9.76□□□□□ -0.85
PTPN20-208ENST00000395727 CNTLNQ9NXG0 1405 aa9.76□□□□□ -0.85
PTPN20-208ENST00000395727 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
PTPN20-208ENST00000395727 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
PTPN20-208ENST00000395727 FAM135AQ9P2D6 1515 aa9.75□□□□□ -0.85
PTPN20-208ENST00000395727 C3P01024 1663 aa9.74□□□□□ -0.85
PTPN20-208ENST00000395727 CAMSAP2Q08AD1 1489 aa9.74□□□□□ -0.85
PTPN20-208ENST00000395727 SPAG9O60271 1321 aaKnown RBP9.74□□□□□ -0.85
PTPN20-208ENST00000395727 A2MP01023 1474 aa9.73□□□□□ -0.85
PTPN20-208ENST00000395727 CCDC141Q6ZP82 1450 aa9.73□□□□□ -0.85
PTPN20-208ENST00000395727 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
PTPN20-208ENST00000395727 HNRNPMP52272 730 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPN20-208ENST00000395727 E2F4Q16254 413 aa9.72□□□□□ -0.85
PTPN20-208ENST00000395727 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
PTPN20-208ENST00000395727 NPATQ14207 1427 aa9.72□□□□□ -0.85
PTPN20-208ENST00000395727 MIA2Q96PC5 1412 aa9.72□□□□□ -0.85
PTPN20-208ENST00000395727 MLECQ14165 292 aa9.71□□□□□ -0.86
PTPN20-208ENST00000395727 ZNF777Q9ULD5 760 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-208ENST00000395727 LOC105371045A0A1W2PR82 267 aa9.7□□□□□ -0.86
PTPN20-208ENST00000395727 HOXB3P14651 431 aaPredicted RBP9.7□□□□□ -0.86
PTPN20-208ENST00000395727 MYT1LQ9UL68 1186 aa9.7□□□□□ -0.86
PTPN20-208ENST00000395727 UHRF1BP1Q6BDS2 1440 aa9.7□□□□□ -0.86
PTPN20-208ENST00000395727 SLC34A2O95436 690 aa9.69□□□□□ -0.86
PTPN20-208ENST00000395727 MYOM3Q5VTT5 1437 aa9.69□□□□□ -0.86
PTPN20-208ENST00000395727 KCNV2Q8TDN2 545 aa9.69□□□□□ -0.86
PTPN20-208ENST00000395727 ZNF644Q9H582 1327 aaPredicted RBP9.69□□□□□ -0.86
PTPN20-208ENST00000395727 SETD1BQ9UPS6 1966 aaKnown RBP9.69□□□□□ -0.86
PTPN20-208ENST00000395727 ZNF142P52746 1687 aaPredicted RBP9.68□□□□□ -0.86
PTPN20-208ENST00000395727 DHX29Q7Z478 1369 aaKnown RBP9.68□□□□□ -0.86
PTPN20-208ENST00000395727 EMILIN3Q9NT22 766 aa9.68□□□□□ -0.86
PTPN20-208ENST00000395727 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
PTPN20-208ENST00000395727 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-208ENST00000395727 CLTCQ00610 1675 aaKnown RBP9.67□□□□□ -0.86
PTPN20-208ENST00000395727 SHANK2Q9UPX8 1470 aa9.66□□□□□ -0.86
PTPN20-208ENST00000395727 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
PTPN20-208ENST00000395727 RNF17Q9BXT8 1623 aaKnown RBP9.66□□□□□ -0.86
PTPN20-208ENST00000395727 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
PTPN20-208ENST00000395727 CROCC2H7BZ55 1655 aa9.65□□□□□ -0.86
PTPN20-208ENST00000395727 ZC3H13Q5T200 1668 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms