RNA–Protein interactions for RNA: ENST00000394277.7

PDE1B-202, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 2,992 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-202ENST00000394277 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
PDE1B-202ENST00000394277 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
PDE1B-202ENST00000394277 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
PDE1B-202ENST00000394277 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
PDE1B-202ENST00000394277 C3P01024 1663 aa16.63■□□□□ 0.25
PDE1B-202ENST00000394277 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
PDE1B-202ENST00000394277 ROCK2O75116 1388 aaKnown RBP16.62■□□□□ 0.25
PDE1B-202ENST00000394277 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
PDE1B-202ENST00000394277 ADAMTSL3P82987 1691 aa16.61■□□□□ 0.25
PDE1B-202ENST00000394277 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
PDE1B-202ENST00000394277 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
PDE1B-202ENST00000394277 TNRQ92752 1358 aa16.61■□□□□ 0.25
PDE1B-202ENST00000394277 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
PDE1B-202ENST00000394277 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
PDE1B-202ENST00000394277 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
PDE1B-202ENST00000394277 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
PDE1B-202ENST00000394277 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
PDE1B-202ENST00000394277 USP47Q96K76 1375 aa16.6■□□□□ 0.25
PDE1B-202ENST00000394277 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
PDE1B-202ENST00000394277 PIK3C2GO75747 1445 aa16.58■□□□□ 0.25
PDE1B-202ENST00000394277 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
PDE1B-202ENST00000394277 CEBPAP49715 358 aaPredicted RBP16.57■□□□□ 0.24
PDE1B-202ENST00000394277 NLRP1Q9C000 1473 aa16.57■□□□□ 0.24
PDE1B-202ENST00000394277 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
PDE1B-202ENST00000394277 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
PDE1B-202ENST00000394277 SETBP1Q9Y6X0 1596 aa16.54■□□□□ 0.24
PDE1B-202ENST00000394277 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
PDE1B-202ENST00000394277 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
PDE1B-202ENST00000394277 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
PDE1B-202ENST00000394277 IQGAP1P46940 1657 aa16.52■□□□□ 0.24
PDE1B-202ENST00000394277 POLR1AO95602 1720 aaPredicted RBP16.51■□□□□ 0.23
PDE1B-202ENST00000394277 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
PDE1B-202ENST00000394277 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
PDE1B-202ENST00000394277 MIER1Q8N108 512 aa16.5■□□□□ 0.23
PDE1B-202ENST00000394277 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
PDE1B-202ENST00000394277 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
PDE1B-202ENST00000394277 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
PDE1B-202ENST00000394277 ADGRB1O14514 1584 aa16.5■□□□□ 0.23
PDE1B-202ENST00000394277 NUTM2DQ5VT03 806 aaPredicted RBP16.48■□□□□ 0.23
PDE1B-202ENST00000394277 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDE1B-202ENST00000394277 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
PDE1B-202ENST00000394277 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
PDE1B-202ENST00000394277 MYO3AQ8NEV4 1616 aa16.47■□□□□ 0.23
PDE1B-202ENST00000394277 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
PDE1B-202ENST00000394277 TESK2Q96S53 571 aa16.46■□□□□ 0.23
PDE1B-202ENST00000394277 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
PDE1B-202ENST00000394277 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
PDE1B-202ENST00000394277 SLIT1O75093 1534 aa16.45■□□□□ 0.22
PDE1B-202ENST00000394277 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
PDE1B-202ENST00000394277 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
PDE1B-202ENST00000394277 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
PDE1B-202ENST00000394277 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
PDE1B-202ENST00000394277 EIF3AQ14152 1382 aaKnown RBP16.43■□□□□ 0.22
PDE1B-202ENST00000394277 PTPRMP28827 1452 aa16.43■□□□□ 0.22
PDE1B-202ENST00000394277 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
PDE1B-202ENST00000394277 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
PDE1B-202ENST00000394277 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
PDE1B-202ENST00000394277 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
PDE1B-202ENST00000394277 ZNF142P52746 1687 aaPredicted RBP16.41■□□□□ 0.22
PDE1B-202ENST00000394277 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
PDE1B-202ENST00000394277 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
PDE1B-202ENST00000394277 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
PDE1B-202ENST00000394277 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
PDE1B-202ENST00000394277 LTKP29376 864 aa16.38■□□□□ 0.21
PDE1B-202ENST00000394277 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
PDE1B-202ENST00000394277 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
PDE1B-202ENST00000394277 TMF1P82094 1093 aa16.36■□□□□ 0.21
PDE1B-202ENST00000394277 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
PDE1B-202ENST00000394277 TXNDC2Q86VQ3 553 aa16.36■□□□□ 0.21
PDE1B-202ENST00000394277 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
PDE1B-202ENST00000394277 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
PDE1B-202ENST00000394277 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
PDE1B-202ENST00000394277 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
PDE1B-202ENST00000394277 MED14O60244 1454 aa16.35■□□□□ 0.21
PDE1B-202ENST00000394277 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
PDE1B-202ENST00000394277 CENPJQ9HC77 1338 aaPredicted RBP16.34■□□□□ 0.21
PDE1B-202ENST00000394277 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.2
PDE1B-202ENST00000394277 DLC1Q96QB1 1528 aa16.32■□□□□ 0.2
PDE1B-202ENST00000394277 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
PDE1B-202ENST00000394277 QRICH2Q9H0J4 1663 aa16.32■□□□□ 0.2
PDE1B-202ENST00000394277 METP08581 1390 aa16.32■□□□□ 0.2
PDE1B-202ENST00000394277 CDCA8Q53HL2 280 aa16.31■□□□□ 0.2
PDE1B-202ENST00000394277 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
PDE1B-202ENST00000394277 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PDE1B-202ENST00000394277 SIRT1Q96EB6 747 aa16.29■□□□□ 0.2
PDE1B-202ENST00000394277 TECPR2O15040 1411 aa16.29■□□□□ 0.2
PDE1B-202ENST00000394277 STK26Q9P289 416 aa16.29■□□□□ 0.2
PDE1B-202ENST00000394277 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
PDE1B-202ENST00000394277 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
PDE1B-202ENST00000394277 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
PDE1B-202ENST00000394277 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.2
PDE1B-202ENST00000394277 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.19
PDE1B-202ENST00000394277 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
PDE1B-202ENST00000394277 BCANQ96GW7 911 aa16.26■□□□□ 0.19
PDE1B-202ENST00000394277 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
PDE1B-202ENST00000394277 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
PDE1B-202ENST00000394277 CPS1P31327 1500 aa16.25■□□□□ 0.19
PDE1B-202ENST00000394277 ANP32CO43423 234 aa16.24■□□□□ 0.19
PDE1B-202ENST00000394277 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
PDE1B-202ENST00000394277 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms