RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RABEP1Q15276 862 aa17.88■□□□□ 0.45
CCDC50-201ENST00000392455 ANKRD30AQ9BXX3 1397 aa17.88■□□□□ 0.45
CCDC50-201ENST00000392455 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
CCDC50-201ENST00000392455 LUC7LQ9NQ29 371 aaKnown RBP17.88■□□□□ 0.45
CCDC50-201ENST00000392455 DYDC1Q8WWB3 177 aa17.88■□□□□ 0.45
CCDC50-201ENST00000392455 MNS1Q8NEH6 495 aa17.88■□□□□ 0.45
CCDC50-201ENST00000392455 KAT6BQ8WYB5 2073 aa17.88■□□□□ 0.45
CCDC50-201ENST00000392455 GOLGA6L10A6NI86 522 aa17.87■□□□□ 0.45
CCDC50-201ENST00000392455 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
CCDC50-201ENST00000392455 LEKR1Q6ZMV7 388 aa17.87■□□□□ 0.45
CCDC50-201ENST00000392455 CLUAP1Q96AJ1 413 aa17.86■□□□□ 0.45
CCDC50-201ENST00000392455 REC8O95072 547 aa17.86■□□□□ 0.45
CCDC50-201ENST00000392455 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
CCDC50-201ENST00000392455 TAF3Q5VWG9 929 aa17.85■□□□□ 0.45
CCDC50-201ENST00000392455 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
CCDC50-201ENST00000392455 ROCK1Q13464 1354 aa17.85■□□□□ 0.45
CCDC50-201ENST00000392455 KIF3BO15066 747 aa17.85■□□□□ 0.45
CCDC50-201ENST00000392455 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
CCDC50-201ENST00000392455 FOXD4L5Q5VV16 416 aaPredicted RBP17.85■□□□□ 0.45
CCDC50-201ENST00000392455 FOXD4L4Q8WXT5 416 aaPredicted RBP17.85■□□□□ 0.45
CCDC50-201ENST00000392455 RNF20Q5VTR2 975 aa17.84■□□□□ 0.45
CCDC50-201ENST00000392455 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
CCDC50-201ENST00000392455 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
CCDC50-201ENST00000392455 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
CCDC50-201ENST00000392455 SEPT11Q9NVA2 429 aaKnown RBP17.83■□□□□ 0.45
CCDC50-201ENST00000392455 ZKSCAN1P17029 563 aaPredicted RBP17.83■□□□□ 0.44
CCDC50-201ENST00000392455 VPS8Q8N3P4 1428 aa17.83■□□□□ 0.44
CCDC50-201ENST00000392455 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
CCDC50-201ENST00000392455 KIF7Q2M1P5 1343 aa17.82■□□□□ 0.44
CCDC50-201ENST00000392455 KIAA0754O94854 1291 aa17.82■□□□□ 0.44
CCDC50-201ENST00000392455 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC50-201ENST00000392455 SEPT7Q16181 437 aaKnown RBP17.82■□□□□ 0.44
CCDC50-201ENST00000392455 DDX49Q9Y6V7 483 aaKnown RBP17.82■□□□□ 0.44
CCDC50-201ENST00000392455 SAFBQ15424 915 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC50-201ENST00000392455 NAP1L1P55209 391 aaKnown RBP17.82■□□□□ 0.44
CCDC50-201ENST00000392455 CAVIN1Q6NZI2 390 aaKnown RBP17.82■□□□□ 0.44
CCDC50-201ENST00000392455 BRMS1Q9HCU9 246 aa17.82■□□□□ 0.44
CCDC50-201ENST00000392455 CHMP5Q9NZZ3 219 aa17.82■□□□□ 0.44
CCDC50-201ENST00000392455 OFD1O75665 1012 aa17.81■□□□□ 0.44
CCDC50-201ENST00000392455 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
CCDC50-201ENST00000392455 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
CCDC50-201ENST00000392455 FMN1Q68DA7 1419 aa17.81■□□□□ 0.44
CCDC50-201ENST00000392455 WASHC2CQ9Y4E1 1318 aa17.81■□□□□ 0.44
CCDC50-201ENST00000392455 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
CCDC50-201ENST00000392455 TRDNQ13061 729 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 ZNF592Q92610 1267 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 CGNL1Q0VF96 1302 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 SMARCE1Q969G3 411 aa17.8■□□□□ 0.44
CCDC50-201ENST00000392455 ERICH2A1L162 156 aa17.79■□□□□ 0.44
CCDC50-201ENST00000392455 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
CCDC50-201ENST00000392455 DESP17661 470 aa17.79■□□□□ 0.44
CCDC50-201ENST00000392455 IQCEQ6IPM2 695 aa17.79■□□□□ 0.44
CCDC50-201ENST00000392455 XBP1P17861 261 aa17.79■□□□□ 0.44
CCDC50-201ENST00000392455 RILPL2Q969X0 211 aa17.78■□□□□ 0.44
CCDC50-201ENST00000392455 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
CCDC50-201ENST00000392455 HMGN5P82970 282 aaKnown RBP17.77■□□□□ 0.44
CCDC50-201ENST00000392455 CPLX1O14810 134 aa17.77■□□□□ 0.44
CCDC50-201ENST00000392455 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.43
CCDC50-201ENST00000392455 GBP2P32456 591 aaPredicted RBP17.76■□□□□ 0.43
CCDC50-201ENST00000392455 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
CCDC50-201ENST00000392455 EVA1CP58658 441 aa17.75■□□□□ 0.43
CCDC50-201ENST00000392455 PPM1EQ8WY54 764 aa17.75■□□□□ 0.43
CCDC50-201ENST00000392455 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
CCDC50-201ENST00000392455 GSE1Q14687 1217 aa17.75■□□□□ 0.43
CCDC50-201ENST00000392455 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
CCDC50-201ENST00000392455 SYCP1Q15431 976 aa17.74■□□□□ 0.43
CCDC50-201ENST00000392455 C1orf141Q5JVX7 400 aa17.74■□□□□ 0.43
CCDC50-201ENST00000392455 TRIM21P19474 475 aaKnown RBP17.74■□□□□ 0.43
CCDC50-201ENST00000392455 NF2P35240 595 aa17.74■□□□□ 0.43
CCDC50-201ENST00000392455 MCTP1Q6DN14 999 aa17.74■□□□□ 0.43
CCDC50-201ENST00000392455 DNAI2Q9GZS0 605 aa17.74■□□□□ 0.43
CCDC50-201ENST00000392455 EIF3JO75822 258 aaKnown RBP17.73■□□□□ 0.43
CCDC50-201ENST00000392455 NUCB2P80303 420 aa17.73■□□□□ 0.43
CCDC50-201ENST00000392455 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
CCDC50-201ENST00000392455 CCDC18Q5T9S5 1454 aa17.73■□□□□ 0.43
CCDC50-201ENST00000392455 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
CCDC50-201ENST00000392455 TSPYL1Q9H0U9 437 aa17.73■□□□□ 0.43
CCDC50-201ENST00000392455 CCDC73Q6ZRK6 1079 aa17.72■□□□□ 0.43
CCDC50-201ENST00000392455 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
CCDC50-201ENST00000392455 CCDC39Q9UFE4 941 aa17.72■□□□□ 0.43
CCDC50-201ENST00000392455 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
CCDC50-201ENST00000392455 ZFYVE27Q5T4F4 411 aa17.72■□□□□ 0.43
CCDC50-201ENST00000392455 CENPQQ7L2Z9 268 aaPredicted RBP17.72■□□□□ 0.43
CCDC50-201ENST00000392455 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
CCDC50-201ENST00000392455 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
CCDC50-201ENST00000392455 PAF1Q8N7H5 531 aa17.71■□□□□ 0.43
CCDC50-201ENST00000392455 MSH5O43196 834 aa17.71■□□□□ 0.43
CCDC50-201ENST00000392455 RAD21O60216 631 aa17.71■□□□□ 0.43
CCDC50-201ENST00000392455 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-201ENST00000392455 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-201ENST00000392455 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CCDC50-201ENST00000392455 SPATA24Q86W54 205 aa17.71■□□□□ 0.43
CCDC50-201ENST00000392455 ANKRD45Q5TZF3 282 aa17.71■□□□□ 0.43
CCDC50-201ENST00000392455 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
CCDC50-201ENST00000392455 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
CCDC50-201ENST00000392455 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
CCDC50-201ENST00000392455 CT47B1P0C2W7 299 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms